EY665182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP4_YEAST (ATP-dependent RNA helicase DBP4 OS=Saccharomyces cerevisiae GN=DBP4 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 9.905e-21 Identity = 62/141 (43.97%), Postives = 85/141 (60.28%), Query Frame = 1 Query: 4 DLARLS---FQTTPVYIDVDDG---RTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDE 402 DLARLS ++T + DV DG + T E LQQ Y VP A + +L+SF+K +L K++VF SS V F E R +Q + +HG+QKQ+ RT T F +A++ L TDV ARG+D PAVDW+VQ D P++ Sbjct: 234 DLARLSLTDYKTVGTH-DVMDGSVNKEASTPETLQQFYIEVPLADKLDILFSFIKSHLKCKMIVFLSSSKQVHFVYETFRKMQPGISLMHLHGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPED 373
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP4_YEAS7 (ATP-dependent RNA helicase DBP4 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP4 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 9.905e-21 Identity = 62/141 (43.97%), Postives = 85/141 (60.28%), Query Frame = 1 Query: 4 DLARLS---FQTTPVYIDVDDG---RTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDE 402 DLARLS ++T + DV DG + T E LQQ Y VP A + +L+SF+K +L K++VF SS V F E R +Q + +HG+QKQ+ RT T F +A++ L TDV ARG+D PAVDW+VQ D P++ Sbjct: 234 DLARLSLTDYKTVGTH-DVMDGSVNKEASTPETLQQFYIEVPLADKLDILFSFIKSHLKCKMIVFLSSSKQVHFVYETFRKMQPGISLMHLHGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPED 373
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX10_HUMAN (Probable ATP-dependent RNA helicase DDX10 OS=Homo sapiens GN=DDX10 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 1.294e-20 Identity = 52/136 (38.24%), Postives = 83/136 (61.03%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDE 402 +DLARLS + P Y+ V + T L+Q Y V ++ +LYSFL+ +L KK +VFFSSC V++ + ++ V +HG+Q+Q +R + +F + +L TD+AARGLD PAV+W++Q+D P++ Sbjct: 261 KDLARLSLKN-PEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPED 395
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP4_CANGA (ATP-dependent RNA helicase DBP4 OS=Candida glabrata GN=DBP4 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.294e-20 Identity = 56/136 (41.18%), Postives = 78/136 (57.35%), Query Frame = 1 Query: 4 DLARLSFQTTPVYIDVDDGRT-KVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDE 402 DLARLS +D T + LQQ Y + A + +LYSF+K +L K++VFFSS V F E R +Q + +HG+QKQ+ RT T F +A++ L TDV ARG+D PAVDW++Q D P++ Sbjct: 234 DLARLSLTDYKKIGTIDSSEDGPATPKTLQQSYIIADLADKLDVLYSFIKSHLKTKMIVFFSSSKQVHFVYETFRKMQPGISLLHLHGRQKQRARTETLDKFFRAQQVCLFATDVVARGIDFPAVDWVIQVDCPED 369
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP4_CANAL (ATP-dependent RNA helicase DBP4 OS=Candida albicans GN=DBP4 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.294e-20 Identity = 56/136 (41.18%), Postives = 79/136 (58.09%), Query Frame = 1 Query: 4 DLARLSFQTTPVYIDVD-DGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDE 402 DLARLS T P I V D T E L+Q Y VP ++ +L+SF+K +L K++VFFSS V++ E R +Q + ++G+ KQ R T F +A+ L TD+ ARGLD PA+DW+VQ D P++ Sbjct: 241 DLARLSL-TNPNKIGVSSDQEVSATPESLEQYYVKVPLDEKLDVLWSFIKSHLKSKILVFFSSSKQVQYTYETFRTLQPGISLMKLYGRHKQTSRLETTMKFSQAQHACLFATDIVARGLDFPAIDWVVQVDCPED 375
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX10_CHICK (Probable ATP-dependent RNA helicase DDX10 OS=Gallus gallus GN=DDX10 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.690e-20 Identity = 60/169 (35.50%), Postives = 92/169 (54.44%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLDSRKNL 501 +DLARLS + P Y+ V + T L Q Y V + +LYSFL+ +L KK +VFF+SC V++ + +Q + +HGKQ+Q KR + F + + +L TD+AARGLD PAV+W++Q+D P++ Y TA +K+G + L K + Sbjct: 265 KDLARLSLKD-PEYVWVHEKAKFSTPATLDQNYIVCELQHKINVLYSFLRSHLKKKSIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKRMEVYTCFVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANT-YIHRVGRTARYKEGGEALLVLLPSEEKGM 431
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP4_DEBHA (ATP-dependent RNA helicase DBP4 OS=Debaryomyces hansenii GN=DBP4 PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 3.764e-20 Identity = 64/193 (33.16%), Postives = 95/193 (49.22%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLDSRKNLHFPSIF*RAGKNPLVKKIMNFEPK 573 +DLARLS D T E L+Q Y +P ++ +L+SF+K +L K++VFFSS V++ E R +Q + ++G+ KQ R T F +A+ L TD+ ARGLD PA+DW+VQ D P++ VG A A + + L S +N + R N + K MN + K Sbjct: 238 KDLARLSLANPKRVGISSDQELSATPESLEQYYIKIPLDEKLDVLWSFIKSHLKSKILVFFSSSKQVQYAYETFRTLQPGISLLKLYGRHKQTSRMETTMKFSQAQHACLFATDIVARGLDFPAIDWVVQIDCPEDAATYVHR--VGRAARFGRAGKSLMMLLPSEEN----GMLKRLNNNKIELKFMNIKQK 424
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP4_PICST (ATP-dependent RNA helicase DBP4 OS=Pichia stipitis GN=DBP4 PE=3 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 6.420e-20 Identity = 55/137 (40.15%), Postives = 79/137 (57.66%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVD-DGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDE 402 +DLARLS T P I V D T E L Q Y +P ++ +L+SF+K +L K++VFFSS V++ E R +Q + ++G+ KQ R T F +A+ L TD+ ARGLD PA+DW+VQ D P++ Sbjct: 239 KDLARLSL-TNPKRIGVSSDQDVSATPESLDQYYIRIPLDEKLDVLWSFIKSHLKSKILVFFSSSKQVQYAYETFRTLQPGISLLKLYGRHKQTSRLETTVKFTQAQYACLFATDIVARGLDFPAIDWVVQVDCPED 374
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP4_KLULA (ATP-dependent RNA helicase DBP4 OS=Kluyveromyces lactis GN=DBP4 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 6.420e-20 Identity = 54/139 (38.85%), Postives = 79/139 (56.83%), Query Frame = 1 Query: 1 EDLARLS---FQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDE 402 +DLARLS ++ ++ + T E LQQ Y VP + +L+SF+K +L K++VF SS V F E R +Q + +HG+QKQ RT T F +A+ L TDV ARG+D P+VDW++Q D P++ Sbjct: 233 DDLARLSLTDYKQVGTMEVLNANSSSATPESLQQSYIEVPLPDKLDILFSFIKSHLKSKLIVFLSSSKQVHFVYETFRKLQPGISLMHLHGRQKQTARTETLDKFSRAQHVCLFSTDVVARGIDFPSVDWVIQVDCPED 371
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX10_MOUSE (Probable ATP-dependent RNA helicase DDX10 OS=Mus musculus GN=Ddx10 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 1.095e-19 Identity = 49/136 (36.03%), Postives = 83/136 (61.03%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDE 402 +DLARLS + P Y+ V + T L+Q Y + ++ +L+SFL+ +L KK +VFFSSC V++ + ++ + +HG+Q+Q +R + +F + +L TD+AARGLD PAV+W++Q+D P++ Sbjct: 261 KDLARLSLKD-PEYVWVHEKAKYSTPATLEQNYIICELHQKISVLFSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPED 395 The following BLAST results are available for this feature:
BLAST of EY665182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665182 ID=EY665182; Name=EY665182; organism=Citrus sinensis; type=EST; length=1045bpback to top |