EY665182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP4_VANPO (ATP-dependent RNA helicase DBP4 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DBP4 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.095e-19 Identity = 58/143 (40.56%), Postives = 80/143 (55.94%), Query Frame = 1 Query: 1 EDLARLSFQT-----TPVYIDVDDGRT--KVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDE 402 EDLARLS P ++ +G+ T E LQQ Y V + +LYSF+K +L K++VF SS V F E R +Q + +HG+QKQ+ RT T F +A+ L TDV ARG+D PA+DW+VQ D P++ Sbjct: 233 EDLARLSLTDYKTIGNPDILNPSNGKVLGPSTPETLQQSYINVELPDKLDMLYSFIKSHLKSKMIVFLSSSKQVHFVYETFRKMQPGISLMHLHGRQKQKARTETLDKFNRAQHVCLFATDVVARGIDFPAIDWVVQVDCPED 375
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP4_PICGU (ATP-dependent RNA helicase DBP4 OS=Pichia guilliermondii GN=DBP4 PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.868e-19 Identity = 54/137 (39.42%), Postives = 77/137 (56.20%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVD-DGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDE 402 +DLARLS P + V D E L+Q Y + A + +L+SFLK +L K++VFFSS V+F E R +Q + ++G+ KQ R T F +A+ L TD+ ARGLD PA+DW+VQ D P++ Sbjct: 238 KDLARLSL-VNPKRVGVSSDQEVSSIPESLEQYYIKISLASKMDVLWSFLKSHLKSKILVFFSSSKQVQFAYEAFRRLQPGISLLKLYGRHKQTSRLETTMKFSRAQHACLFATDIVARGLDFPAIDWVVQVDCPED 373
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP4_MAGGR (ATP-dependent RNA helicase DBP4 OS=Magnaporthe grisea GN=DBP4 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.440e-19 Identity = 62/163 (38.04%), Postives = 87/163 (53.37%), Query Frame = 1 Query: 4 DLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLD 486 DLARLS + P Y+ V T T LQQ Y V P ++ L+ F+K NL K++VF SS V+F E R +Q + +HG+QKQ R F ++ L TDV ARG+D VDW+VQ D P++ + Y TA +++ +G A +FLD Sbjct: 242 DLARLSLKD-PEYVSVHAEATTATPSTLQQHYIVTPLPEKLDTLWGFIKANLKSKMVVFLSSGKQVRFVYESFRQMQPGIPLLHMHGRQKQLARLDVTKRFDSSKHACLFATDVIARGIDFTGVDWVVQVDAPEDTDD-YIHRVGRTARYER--EGKAVIFLD 400
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX55_DICDI (Probable ATP-dependent RNA helicase ddx55 OS=Dictyostelium discoideum GN=ddx55 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 5.435e-19 Identity = 59/162 (36.42%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 85 LQQGYCVVPSAKRFILLYSFLKRNLSK-KVMVFFSSCNSVKFHSELLRYIQV----DCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLDSRKNLHFPSIF*RAGKNPLVKKI 555 L Y +VP +R L FL ++ K K++++F +C++V + ++L+ ++V F +HGK +R F F +A G LL TD+AARGLDIP VDW++QYD P +PK G TA + G GNA +FL ++ + F + K PLV+ + Sbjct: 285 LDNRYMIVPVEERLNQLVHFLLNHIDKNKIIIYFLTCSTVDYFFKILQSVKVLSGKPFFSLHGKAPHSQRIKVFDSFSQATNGCLLSTDLAARGLDIPNVDWVLQYDSPQDPKAFVHRIG-RTA--RMGRDGNALIFLSPEEDSYIE--FLKIKKVPLVEMV 441
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP4_YARLI (ATP-dependent RNA helicase DBP4 OS=Yarrowia lipolytica GN=DBP4 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 5.435e-19 Identity = 60/162 (37.04%), Postives = 80/162 (49.38%), Query Frame = 1 Query: 4 DLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483 DLARLS P YI + T T + L+Q Y V + L+ FL+ + K++VFFSS V++ E R +Q + +HGKQKQ R F KA L TD+ ARG+D PAV W+VQ D P++ G + G G A LFL Sbjct: 232 DLARLSL-ADPKYISANPDTTSSTPKNLEQNYVCVELQDKLDTLWGFLRTHTKFKIIVFFSSSKQVRYVYETFRTLQPGIPLLHLHGKQKQGARMDVVSKFSKASSSCLFATDIVARGIDFPAVHWVVQVDCPEDAATYIHRVGRSA---RFGKSGKALLFL 389
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: RH49_ARATH (DEAD-box ATP-dependent RNA helicase 49 OS=Arabidopsis thaliana GN=RH49 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 7.098e-19 Identity = 53/138 (38.41%), Postives = 76/138 (55.07%), Query Frame = 1 Query: 4 DLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYI----QVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEP 405 DLA+ + I + ++K T+ GL Y + ++ L L N +KK++VFF +C V + +L I + F HGK Q+ R T F +A G+LLCTDVAARGLDIP +D++VQYDPP +P Sbjct: 214 DLAKAGLRNAMEVISGAESKSK-TSSGLYCEYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDP 350
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DBP4_LODEL (ATP-dependent RNA helicase DBP4 OS=Lodderomyces elongisporus GN=DBP4 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 7.098e-19 Identity = 53/137 (38.69%), Postives = 77/137 (56.20%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVD-DGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQ--VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDE 402 +DLARLS T P I D E L Q Y VP ++ +L+SF+K +L K++VFFSS V++ E R +Q + ++G+ KQ R T F +A+ L TD+ ARGLD PA+DW++Q D P++ Sbjct: 240 QDLARLSL-TNPKRIGTSSDQDISAIPESLDQYYVKVPLNEKLDVLWSFIKSHLKSKILVFFSSSKQVQYAYETFRTLQPGIPLMKLYGRHKQTSRLETTVKFSQAQHACLFATDIVARGLDFPAIDWVIQVDCPED 375
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: RH18_ARATH (DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis thaliana GN=RH18 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 9.271e-19 Identity = 64/174 (36.78%), Postives = 90/174 (51.72%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDV-----DDGRTKVTNE----GLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYI----QVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483 E+LA+ + PV ++V + ++TN GL Y + K+ L L +N KK++VFF +C SV + +L I + IHG KQ R F KA G LLCTDVAARGLDIP +D++VQYDPP +P ++ TA + G +G A +FL Sbjct: 213 EELAKAGLRN-PVRVEVRAKSKSESSQQLTNSKTPSGLHLEYMECEADKKSSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNM-FNHRAGRTA--RLGRQGRAIVFL 382
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX55_MOUSE (ATP-dependent RNA helicase DDX55 OS=Mus musculus GN=Ddx55 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.581e-18 Identity = 55/141 (39.01%), Postives = 83/141 (58.87%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDD-----GRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSE----LLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPP 396 E+L R + PV I V + T+ T L+ Y + + ++F L FL+ +K +VFFS+C V+++ + LL+ +++ C IHGK K KR F +F K + GIL+CTDV ARG+DIP V+W++QYDPP Sbjct: 210 ENLVRAGLRN-PVRISVKEKGVAASSTQKTPSRLENHYMICKADEKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALLKKVKILC--IHGKMKY-KRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPP 346
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX55_BOVIN (ATP-dependent RNA helicase DDX55 OS=Bos taurus GN=DDX55 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.581e-18 Identity = 55/141 (39.01%), Postives = 84/141 (59.57%), Query Frame = 1 Query: 1 EDLARLSFQTTPVYIDVDD-----GRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSE----LLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPP 396 E+L R + PV I V + T+ T L+ Y V + ++F L FL+ + +K +VFFS+C V+++ + L++ +++ C IHGK K KR F +F K + GIL+CTDV ARG+DIP V+W++QYDPP Sbjct: 210 ENLVRAGLRN-PVRISVKEKGVAASSTQKTPSRLENHYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALETLVKGVKIMC--IHGKMKY-KRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPP 346 The following BLAST results are available for this feature:
BLAST of EY665182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665182 ID=EY665182; Name=EY665182; organism=Citrus sinensis; type=EST; length=1045bpback to top |