EY665182

Overview
NameEY665182
Unique NameEY665182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1045
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_ASPNC (ATP-dependent RNA helicase has1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=has1 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 6.582e-49
Identity = 93/161 (57.76%), Postives = 121/161 (75.16%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483
            EDLAR+S +  P+YI+VD  +   T EGL+QGY +  + KRF+LL+SFLKRNL KK++VFFSSCN VK+H+ELL YI +   ++HGKQKQQKRT TFF+FC A++G L+CTDVAARGLDIPAVDWI+Q+DPPD+ ++      VG        KG + +FL
Sbjct:  319 EDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKKKIIVFFSSCNCVKYHAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDTRDYVHR--VGRTARGVNGKGRSLMFL 477          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_YARLI (ATP-dependent RNA helicase HAS1 OS=Yarrowia lipolytica GN=HAS1 PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.466e-48
Identity = 114/230 (49.57%), Postives = 151/230 (65.65%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLDSRKNLHFPSIF*RAGKNPLVKKIMNFEPKKTGSKVQSPSGEKIGLANTYLILKPTPPKNGVTHFLFPY 690
            EDLAR+S +  P+Y++VD+     T EGL+QGY V  S KRF+LL+SFLKRN  KK++VF SSCNSVKF+ ELL YI +   D+HGKQKQQKRT TFF+F  A++G+L+CTDVAARGLDIP VDWI+Q+DPPD+P++ Y      TA  +  A G + +FL +   L F   + +A K PL +      P K  + VQS   EK+  +N +L    T  K+G   +L  Y
Sbjct:  324 EDLARISLKKGPLYLNVDEHNVSSTAEGLEQGYVVCDSDKRFLLLFSFLKRNAGKKIIVFLSSCNSVKFYGELLNYIDLPVLDLHGKQKQQKRTNTFFEFINAKQGVLICTDVAARGLDIPKVDWIIQFDPPDDPRD-YIHRVGRTA--RGSASGKSIMFL-TPSELGFLR-YLKAAKVPLNEYEF---PNKKIANVQSQL-EKLISSNYWL---NTSAKDGYRAYLQAY 541          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_YEAST (ATP-dependent RNA helicase HAS1 OS=Saccharomyces cerevisiae GN=HAS1 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.915e-48
Identity = 96/161 (59.63%), Postives = 123/161 (76.40%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483
            EDLAR+S +  P++I+V       T +GL+QGY V  S KRF+LL+SFLKRN  KK++VF SSCNSVK+++ELL YI +   ++HGKQKQQKRT TFF+FC AE+GIL+CTDVAARGLDIPAVDWI+Q+DPPD+P++ Y      TA   KG KG + +FL
Sbjct:  236 EDLARISLRPGPLFINVVPETDNSTADGLEQGYVVCDSDKRFLLLFSFLKRNQKKKIIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRD-YIHRVGRTARGTKG-KGKSLMFL 394          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_MAGGR (ATP-dependent RNA helicase HAS1 OS=Magnaporthe grisea GN=HAS1 PE=3 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 2.501e-48
Identity = 112/235 (47.66%), Postives = 151/235 (64.26%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLDSRKNLHFPS-----IF*RAGKNPLVKKIMNFEPKKTGSKVQSPSGEKIGLANTYLILKPTPPKNGVTHFLFPY 690
            EDLAR+S +  P+Y++VD+ +   T EGL+QGY V  + KRFILL+SFL++   KK++VFFSSCNSVK+++ELL YI     D+HGKQKQQKRT TFF+FC A++G L+CTDVAARGLDIPAVDWIVQ+DPPD+P++      VG        KG + +FL        PS      + +  + P+V+   +F P K+   VQS   + IG  N YL    +  K+G   +L  Y
Sbjct:  304 EDLARVSLRPGPLYLNVDEEKEYSTVEGLEQGYVVCEADKRFILLFSFLQKMKKKKIIVFFSSCNSVKYYAELLNYIDCQVLDLHGKQKQQKRTNTFFEFCNADRGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHR--VGRTARGTNKKGRSLMFL-------LPSEVGFLTYLKQARVPVVE--FDF-PTKSIKNVQSQLEKLIG-KNYYL---NSSAKDGFRSYLHAY 522          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_ASHGO (ATP-dependent RNA helicase HAS1 OS=Ashbya gossypii GN=HAS1 PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 3.267e-48
Identity = 94/161 (58.39%), Postives = 125/161 (77.64%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483
            EDLAR+S +  P++I+VD  +   T +GL+QGY V  S KRF+LL++FLK+  +KK++VF SSCNSVK+++ELL YI +   ++HGKQKQQKRT TFF+FC AE+GIL+CTDVAARGLDIPAVDWI+Q+DPPD+P++ Y      TA   KG KG + +FL
Sbjct:  233 EDLARISLRPGPLFINVDSEKETSTADGLEQGYVVCDSDKRFLLLFTFLKKFQNKKIIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGILVCTDVAARGLDIPAVDWIIQFDPPDDPRD-YIHRVGRTAKGTKG-KGKSLMFL 391          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_CANGA (ATP-dependent RNA helicase HAS1 OS=Candida glabrata GN=HAS1 PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 5.572e-48
Identity = 92/161 (57.14%), Postives = 120/161 (74.53%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483
            EDL+R+S +  P++I+V       T +GL+QGY V  S KRF+LL+SFLKRN  KK++VF SSCNSVK+++ELL YI +   ++HGKQKQQKRT TFF+FC AE+GIL+CTDVAARGLDIPAVDWI+Q+DPPD+P++      VG        KG + +FL
Sbjct:  223 EDLSRISLRPGPLFINVVSEHDSSTADGLEQGYVVCESDKRFLLLFSFLKRNQKKKIIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHR--VGRTARGTNGKGKSLMFL 381          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX18_DROME (Probable ATP-dependent RNA helicase pitchoune OS=Drosophila melanogaster GN=pit PE=2 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 5.572e-48
Identity = 94/161 (58.39%), Postives = 115/161 (71.43%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483
            E L++L+ ++ P+Y+ V D +   T +GL+QGY V PS KR ++L++FLK+N  KKVMVFFSSC SVK+H EL  YI +    IHGKQKQ KRTTTFF FC AE GILLCTDVAARGLDIP VDWIVQYDPPD+P+E      VG      G  G+A L +
Sbjct:  380 EALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHR--VGRTARGSGTSGHALLLM 538          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_CRYNE (ATP-dependent RNA helicase HAS1 OS=Cryptococcus neoformans GN=HAS1 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.241e-47
Identity = 96/160 (60.00%), Postives = 121/160 (75.62%), Query Frame = 1
Query:    4 DLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483
            DLAR+S +  P+YI+VD+ +   T + L+QGY V  S +RF+LL++FLK+NL KKV+VFFSSCNSVK+H+ELL YI V   D+HGKQKQQKRT TFF+F  A  GILLCTDVAARGLDIP VDWI+Q+DPPD+P++ Y      TA  + G  G + LFL
Sbjct:  324 DLARISLRPGPLYINVDETKEASTADMLEQGYVVCESDQRFMLLFTFLKKNLKKKVIVFFSSCNSVKYHAELLNYIDVPVLDLHGKQKQQKRTNTFFEFINAPAGILLCTDVAARGLDIPKVDWIIQFDPPDDPRD-YIHRVGRTA--RAGKSGKSLLFL 480          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_DEBHA (ATP-dependent RNA helicase HAS1 OS=Debaryomyces hansenii GN=HAS1 PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 3.612e-47
Identity = 93/161 (57.76%), Postives = 116/161 (72.05%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483
            EDLAR+S +  P+YI+V       T  GL+QGY V  S KRF+LL+SFLKRN+ KK++VF SSCN VK+  ELL YI +   D+HGKQKQQKRT TFF+FC A +GIL+CTDVAARGLDIPAVDWI+Q+DPPD+P++      VG        KG + +FL
Sbjct:  298 EDLARISLRPGPLYINVASESEASTVAGLEQGYVVCESDKRFLLLFSFLKRNVKKKIIVFLSSCNCVKYFGELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNATQGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHR--VGRTARGTAGKGKSLMFL 456          
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: HAS1_PICGU (ATP-dependent RNA helicase HAS1 OS=Pichia guilliermondii GN=HAS1 PE=3 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 6.161e-47
Identity = 91/161 (56.52%), Postives = 117/161 (72.67%), Query Frame = 1
Query:    1 EDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFL 483
            EDLAR+S +  P+YI+V       T +GL+QGY    S  RF+LL+SFL+RN+ KK++VF SSCN VK+  ELL YI +   D+HGKQKQQKRT TFF+FC A++GIL+CTDVAARGLDIPAVDWI+Q+DPPD+P++      VG      G KG + +FL
Sbjct:  299 EDLARISLRAGPLYINVVPETEVSTADGLEQGYVTCDSDMRFLLLFSFLRRNIKKKIIVFLSSCNCVKYFGELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHR--VGRTARGTGGKGKSLMFL 457          
The following BLAST results are available for this feature:
BLAST of EY665182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
HAS1_ASPNC6.582e-4957.76ATP-dependent RNA helicase has1 OS=Aspergillus nig... [more]
HAS1_YARLI1.466e-4849.57ATP-dependent RNA helicase HAS1 OS=Yarrowia lipoly... [more]
HAS1_YEAST1.915e-4859.63ATP-dependent RNA helicase HAS1 OS=Saccharomyces c... [more]
HAS1_MAGGR2.501e-4847.66ATP-dependent RNA helicase HAS1 OS=Magnaporthe gri... [more]
HAS1_ASHGO3.267e-4858.39ATP-dependent RNA helicase HAS1 OS=Ashbya gossypii... [more]
HAS1_CANGA5.572e-4857.14ATP-dependent RNA helicase HAS1 OS=Candida glabrat... [more]
DDX18_DROME5.572e-4858.39Probable ATP-dependent RNA helicase pitchoune OS=D... [more]
HAS1_CRYNE1.241e-4760.00ATP-dependent RNA helicase HAS1 OS=Cryptococcus ne... [more]
HAS1_DEBHA3.612e-4757.76ATP-dependent RNA helicase HAS1 OS=Debaryomyces ha... [more]
HAS1_PICGU6.161e-4756.52ATP-dependent RNA helicase HAS1 OS=Pichia guillier... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-A02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665182 ID=EY665182; Name=EY665182; organism=Citrus sinensis; type=EST; length=1045bp
GAGGATCTTGCTCGCTTGTCATTTCAGACAACTCCAGTTTATATTGATGT
GGATGATGGGAGAACTAAGGTCACCAACGAAGGCCTGCAGCAAGGCTATT
GTGTGGTGCCCAGTGCCAAGAGATTTATCCTTCTATATTCCTTCTTGAAG
AGGAATCTGTCAAAGAAAGTGATGGTCTTCTTCTCCTCGTGTAATTCAGT
CAAATTTCATTCAGAACTTCTCAGATATATTCAGGTGGATTGCTTTGATA
TCCATGGAAAGCAAAAGCAACAGAAACGAACCACTACCTTCTTTGACTTC
TGCAAGGCGGAGAAGGGCATCTTGTTGTGTACTGATGTAGCTGCCCGTGG
ACTTGACATTCCTGCTGTGGACTGGATTGTGCAGTATGATCCTCCTGATG
AACCCAAGGAATAATATTCTTCGGGTGGGGTCGGGACAGCCCCGTGGAAG
AAAGGTGCAAAAGGAAATGCCCCACTTTTTCTTGATTCCAGAAAGAATTT
ACATTTTCCTTCCATATTCTGAAGGGCTGGCAAAAATCCCCTGGTTAAAA
AAATTATGAATTTTGAACCAAAAAAAACTGGGTCTAAGGTGCAGTCCCCT
TCCGGGGAAAAAATTGGGTTGGCTAACACCTATTTAATTTTGAAACCAAC
CCCCCCTAAAAATGGCGTTACGCATTTTTTATTTCCATACCAATAGATTT
CCCCACCCCCTAAGAAAGAATAAATCTTCCAAGGTATACCCCCCCCTATT
GATTTGGAAGGGGGAACCCGCCCTCGTTTTTATTTATTGTTTTTTTTTCT
CCCCCCCCCCCTAGAGGGGGAAAAATCCAAACACATAGAAAACCACGCTG
GTCCCCTCTTATAATTTTTTAAAAAAATAAAAAACCACCCCAAAAAAACT
CACACAAAAGAGAACACAAAAACAAATTGGTTTTTTTCTCATTGAAAACA
CTCCACCCCCCTTTTTATTGGAGTGGTAGGAAACAGAAGAAAGAATAATA
AAAAATAAAAATAAAAATACACACCCCCCCCACTTTTGTTTTTAT
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