EY665182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX31_DICDI (Probable ATP-dependent RNA helicase ddx31 OS=Dictyostelium discoideum GN=ddx31 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.613e-13 Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 235 VDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE 411 V F +HG+ QQ RT TFFDF + GILL TDV+ARGLD+P+V+WIVQYDP + K+ Sbjct: 604 VPIFKLHGELDQQTRTKTFFDFKNSPNGILLTTDVSARGLDLPSVNWIVQYDPCSDTKD 662
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_NEOFI (ATP-dependent rRNA helicase spb4 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=spb4 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.412e-13 Identity = 53/130 (40.77%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 49 VDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSK------KVMVFFSSCNSVKFHSELLRYIQVDCF---DIHGKQKQQKRTTTFFDFCKA-EKGILLCTDVAARGLDIPAVDWIVQYDPPDEPK 408 VDD RT + LQ Y P + +F + LKR LS K + F S+C+ V + S +L + D F +HGK + R F F + + ILL TDVAARGLDIP+VD +VQ DPP +PK Sbjct: 259 VDDKRTPAS---LQMTYLTTPPSHKF----AALKRILSSVQPTPLKTIFFVSTCSGVDYLSAILPLLLGDDFLLIPLHGKHQANVRQKNFNRFINSHDPAILLTTDVAARGLDIPSVDLVVQIDPPSDPK 381
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_CHAGB (ATP-dependent rRNA helicase SPB4 OS=Chaetomium globosum GN=SPB4 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.456e-13 Identity = 48/118 (40.68%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 73 TNEGLQQGYCVVPSAKRFILLYSFLKRNLSK--KVMVFFSSCNSVKFHSELLRYIQVDCFDI---HGKQKQQKRTTTFFDFCKAEKG-ILLCTDVAARGLDIPAVDWIVQYDPPDEPK 408 T LQ Y V P++++ L L+R + + +VFFS+C +VK+ + +L I F I HGK + Q R F F A +LL TD+AARGLDIP VD +VQ+DPP + K Sbjct: 265 TPMSLQMSYIVTPASQKIPALCQLLERLEPRPSRSIVFFSTCFAVKYFARVLHGILPPGFSIVSLHGKLEPQVREKNFERFVNAASPTVLLTTDIAARGLDIPQVDLVVQHDPPTDTK 382
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX47_MOUSE (Probable ATP-dependent RNA helicase DDX47 OS=Mus musculus GN=Ddx47 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 4.456e-13 Identity = 43/113 (38.05%), Postives = 59/113 (52.21%), Query Frame = 1 Query: 73 TNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE 411 T E LQQ Y +PS + L L M+F S+CN+ + + LLR + +HG+ Q KR + F + ILL TDVA+RGLDIP VD +V +D P K+ Sbjct: 234 TVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKD 346
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX47_HUMAN (Probable ATP-dependent RNA helicase DDX47 OS=Homo sapiens GN=DDX47 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.456e-13 Identity = 43/113 (38.05%), Postives = 59/113 (52.21%), Query Frame = 1 Query: 73 TNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE 411 T E LQQ Y +PS + L L M+F S+CN+ + + LLR + +HG+ Q KR + F + ILL TDVA+RGLDIP VD +V +D P K+ Sbjct: 234 TVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKD 346
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: DDX47_BOVIN (Probable ATP-dependent RNA helicase DDX47 OS=Bos taurus GN=DDX47 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.456e-13 Identity = 43/113 (38.05%), Postives = 59/113 (52.21%), Query Frame = 1 Query: 73 TNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKE 411 T E LQQ Y +PS + L L M+F S+CN+ + + LLR + +HG+ Q KR + F + ILL TDVA+RGLDIP VD +V +D P K+ Sbjct: 236 TVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKD 348
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_ASPFU (ATP-dependent rRNA helicase spb4 OS=Aspergillus fumigatus GN=spb4 PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 7.602e-13 Identity = 52/130 (40.00%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 49 VDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSK------KVMVFFSSCNSVKFHSELLRYIQVDCF---DIHGKQKQQKRTTTFFDFCKA-EKGILLCTDVAARGLDIPAVDWIVQYDPPDEPK 408 VDD RT + LQ Y P + +F + LKR +S K + F S+C+ V + S +L + D F +HGK + R F F + + ILL TDVAARGLDIP+VD +VQ DPP +PK Sbjct: 259 VDDKRTPAS---LQMTYLTTPPSHKF----AALKRIVSSVQPTPLKTIFFVSTCSGVDYLSAILPLLLGDDFLLIPLHGKHQANVRQKNFNRFINSHDPAILLTTDVAARGLDIPSVDLVVQIDPPSDPK 381
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_ASPTN (ATP-dependent rRNA helicase spb4 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=spb4 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.297e-12 Identity = 47/120 (39.17%), Postives = 63/120 (52.50%), Query Frame = 1 Query: 67 KVTNEGLQQGYCVVPSAKRFILLYSFLK--RNLSKKVMVFFSSCNSVKFHSELLRYIQVDCFDI---HGKQKQQKRTTTFFDFCKAEK-GILLCTDVAARGLDIPAVDWIVQYDPPDEPK 408 K T LQ Y P A +F+ L L + +K + F S+C+ V + + +L + D F + HGK R F F A ILL TDVA+RGLDIP+VD +VQ DPP +PK Sbjct: 262 KRTPASLQMTYLTTPPAHKFLTLRPILTSLQPTPQKTIFFVSTCSGVDYLAAILPLLLGDDFQLIPLHGKHPANVRQKNFNRFINAHTPSILLTTDVASRGLDIPSVDLVVQIDPPSDPK 381
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_USTMA (ATP-dependent rRNA helicase SPB4 OS=Ustilago maydis GN=SPB4 PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.693e-12 Identity = 48/132 (36.36%), Postives = 70/132 (53.03%), Query Frame = 1 Query: 160 SKKVMVFFSSCNSVKF------HSELLRYIQVDCFDIHGKQKQQKRTTTFFDFCKAEK--------GILLCTDVAARGLDIPAVDWIVQYDPPDEPKE*YSSGGVGTAPWKKGAKGNAPLFLDSRKNLHFPS 513 ++K++V+FS+C V + +LR +V + +HGKQ KR + F F + +L CTDVAARGLD+P VD +VQYDPP +PK +S TA + G G A + L + + F S Sbjct: 348 ARKLIVYFSTCAQVNYFYSVFSQVSILRQHRVKLYALHGKQTPSKRKSMFDTFVASTALDSGASGASVLFCTDVAARGLDLPDVDVVVQYDPPTDPKV-FSHRCGRTA--RAGRNGRAIVMLHTGREQDFVS 476
BLAST of EY665182 vs. ExPASy Swiss-Prot
Match: SPB4_ASPCL (ATP-dependent rRNA helicase spb4 OS=Aspergillus clavatus GN=spb4 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.693e-12 Identity = 49/126 (38.89%), Postives = 67/126 (53.17%), Query Frame = 1 Query: 49 VDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLK--RNLSKKVMVFFSSCNSVKFHSELLRYIQVDCF---DIHGKQKQQKRTTTFFDFCKAEK-GILLCTDVAARGLDIPAVDWIVQYDPPDEPK 408 VDD RT + LQ Y P +F L + L + +K + F S+C+ V + S +L + D F +HGK + R F F + ILL TDVA+RGLDIP+VD +VQ DPP +PK Sbjct: 259 VDDKRTPAS---LQMTYLSTPPLHKFAALKNILSSVQPTPQKSIFFVSTCSGVDYLSAILPLLLGDDFLLIPLHGKHQANVRQKNFNRFLSSHSPAILLTTDVASRGLDIPSVDLVVQIDPPSDPK 381 The following BLAST results are available for this feature:
BLAST of EY665182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665182 ID=EY665182; Name=EY665182; organism=Citrus sinensis; type=EST; length=1045bpback to top |