EY665168

Overview
NameEY665168
Unique NameEY665168
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length425
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: BETB_ECOL5 (Betaine aldehyde dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.277e-12
Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 2
Query:   38 DPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            D    +   T +GLAAG+ T   + A+ ++  L AG  WIN +    A +P GGYK SGIGRE G+ +L +Y QVK++
Sbjct:  402 DEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: BETB_ECOHS (Betaine aldehyde dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=betB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.277e-12
Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 2
Query:   38 DPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            D    +   T +GLAAG+ T   + A+ ++  L AG  WIN +    A +P GGYK SGIGRE G+ +L +Y QVK++
Sbjct:  402 DEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: BETB_ECODH (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=betB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.277e-12
Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 2
Query:   38 DPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            D    +   T +GLAAG+ T   + A+ ++  L AG  WIN +    A +P GGYK SGIGRE G+ +L +Y QVK++
Sbjct:  402 DEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: BETB_ECO7I (Betaine aldehyde dehydrogenase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.277e-12
Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 2
Query:   38 DPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            D    +   T +GLAAG+ T   + A+ ++  L AG  WIN +    A +P GGYK SGIGRE G+ +L +Y QVK++
Sbjct:  402 DEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: BETB_ECO5E (Betaine aldehyde dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=betB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.277e-12
Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 2
Query:   38 DPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            D    +   T +GLAAG+ T   + A+ ++  L AG  WIN +    A +P GGYK SGIGRE G+ +L +Y QVK++
Sbjct:  402 DEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: BETB_ECO57 (Betaine aldehyde dehydrogenase OS=Escherichia coli O157:H7 GN=betB PE=3 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 5.277e-12
Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 2
Query:   38 DPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            D    +   T +GLAAG+ T   + A+ ++  L AG  WIN +    A +P GGYK SGIGRE G+ +L +Y QVK++
Sbjct:  402 DEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: BETB_ECO55 (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=betB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.277e-12
Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 2
Query:   38 DPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            D    +   T +GLAAG+ T   + A+ ++  L AG  WIN +    A +P GGYK SGIGRE G+ +L +Y QVK++
Sbjct:  402 DEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: BETB_ECO45 (Betaine aldehyde dehydrogenase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.277e-12
Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 2
Query:   38 DPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            D    +   T +GLAAG+ T   + A+ ++  L AG  WIN +    A +P GGYK SGIGRE G+ +L +Y QVK++
Sbjct:  402 DEVIRRANDTDYGLAAGIVTADLNLAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: BETB_ECO27 (Betaine aldehyde dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.277e-12
Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 2
Query:   38 DPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            D    +   T +GLAAG+ T   + A+ ++  L AG  WIN +    A +P GGYK SGIGRE G+ +L +Y QVK++
Sbjct:  402 DEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: ALDH_VIBCH (Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.277e-12
Identity = 32/70 (45.71%), Postives = 46/70 (65.71%), Query Frame = 2
Query:   65 TRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV 274
            T +GL AGV+T+  + A+ M + ++AG VW+NCY  + A   FGGYK SGIGRE    +L+ Y  +K V+
Sbjct:  426 TVYGLGAGVWTRDINIAHRMAKNIKAGRVWVNCYHAYPAHAAFGGYKKSGIGRETHKLTLSHYQNIKNVL 495          
The following BLAST results are available for this feature:
BLAST of EY665168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
BETB_ECOL55.277e-1242.31Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOHS5.277e-1242.31Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECODH5.277e-1242.31Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO7I5.277e-1242.31Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO5E5.277e-1242.31Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO575.277e-1242.31Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO555.277e-1242.31Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO455.277e-1242.31Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO275.277e-1242.31Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
ALDH_VIBCH5.277e-1245.71Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-G11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665168 ID=EY665168; Name=EY665168; organism=Citrus sinensis; type=EST; length=425bp
GGTNCGCCTGCCAGTATCGGTCCGGNATTCCCGGGCCGACCCAGCGTCCG
AGAAGACATATAAAACACGCTTTGGTCTAGCTGCTGGGGTTTTCACCAAG
AGTGCAGACACTGCAAACACCATGATGCGTGCACTGAGAGCTGGGACTGT
ATGGATTAACTGCTACGACGTGTTTGATGCTGCTATTCCTTTCGGTGGGT
ACAAGCTGAGTGGCATAGGCCGGGAAAAGGGAATTTACAGCCTTAACGCT
TACTTGCAAGTAAAGGCCGTCGTTCAACCTGTGAAGAACCCAGCATGGCT
TTAGTTTCCTGAAGTTCCCCCTCCCTTTTAATCTGTGTTTATGAATAAGG
ACAGCGTGCTAATATCAGCTTGTAATTATGGAGCAAATGGATAATTTACT
TTAAAAGAAAAAAAAAAAAAAAAAA
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