EY665168

Overview
NameEY665168
Unique NameEY665168
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length425
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7410 contig Csv1_Contig7410:1575..1997. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: AL1A7_RAT (Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus GN=Aldh1a7 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.289e-15
Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 2
Query:   38 DPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV 283
            D   ++   T +GLAAGVFTK  D A T+  AL+AGTVW+NCY       PFGG+K+SG GRE G   +  Y ++K V   +
Sbjct:  415 DEVIKRANNTPYGLAAGVFTKDLDRAITVSSALQAGTVWVNCYLTLSVQCPFGGFKMSGNGREMGEQGVYEYTELKTVAMKI 496          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.289e-15
Identity = 41/83 (49.40%), Postives = 53/83 (63.86%), Query Frame = 2
Query:   50 EKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV--KNP 292
            ++   T +GL A VFTK+ D A  +  AL +GTVWINCY+   A  PFGG+K+SG GRE G Y+L  Y +VK V   +  KNP
Sbjct:  430 KRANSTDYGLTAAVFTKNLDKALKLASALESGTVWINCYNALYAQAPFGGFKMSGNGRELGEYALAEYTEVKTVTIKLGDKNP 512          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: AL1A2_CHICK (Retinal dehydrogenase 2 OS=Gallus gallus GN=ALDH1A2 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.989e-15
Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = 2
Query:   20 VRXSRADPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            +R    D   E+   + FGL A VFT   + A T+  A++AGTVWINCY+  +A  PFGG+K+SG GRE G   L  Y +VK V
Sbjct:  426 LRFKTVDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGESGLREYSEVKTV 509          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.904e-15
Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 2
Query:   38 DPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV 283
            D   ++   T +GLAAGVFTK  D A T+  AL+AG VW+NCY       PFGG+K+SG GRE G + L  Y ++K V   +
Sbjct:  415 DDVIKRANNTTYGLAAGVFTKDLDKAITVSSALQAGMVWVNCYLAVPVQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMQI 496          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: AL1A2_RAT (Retinal dehydrogenase 2 OS=Rattus norvegicus GN=Aldh1a2 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.904e-15
Identity = 41/92 (44.57%), Postives = 54/92 (58.70%), Query Frame = 2
Query:   20 VRXSRADPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQ--PVKN 289
            +R    D   E+   + FGL A VFT   + A  +  A++AGTVWINCY+  +A  PFGG+K+SG GRE G + L  Y +VK V    P KN
Sbjct:  426 LRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVKIPQKN 517          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: AL1A2_MOUSE (Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 3.904e-15
Identity = 41/92 (44.57%), Postives = 54/92 (58.70%), Query Frame = 2
Query:   20 VRXSRADPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQ--PVKN 289
            +R    D   E+   + FGL A VFT   + A  +  A++AGTVWINCY+  +A  PFGG+K+SG GRE G + L  Y +VK V    P KN
Sbjct:  426 LRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVTVKIPQKN 517          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: ALDH_AGABI (Aldehyde dehydrogenase OS=Agaricus bisporus GN=aldA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.698e-15
Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 2
Query:   65 TRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            + +GLAA VF++  + A     A +AGT W+NC +  DA +PFGGYK SGIGRE G Y+L+ Y  VKAV
Sbjct:  424 SNYGLAAAVFSQDINKAIETAHAFKAGTAWVNCANTIDAGVPFGGYKQSGIGRELGEYALHNYTNVKAV 492          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: AL1B1_HUMAN (Aldehyde dehydrogenase X, mitochondrial OS=Homo sapiens GN=ALDH1B1 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.136e-14
Identity = 41/91 (45.05%), Postives = 54/91 (59.34%), Query Frame = 2
Query:   23 RXSRADPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV--QPVKN 289
            +  + +   E+   TR+GLAA VFT+  D A    +AL+AGTVW+N Y++     PFGG+K SG GRE G   L AY +VK V    P KN
Sbjct:  426 KFKKIEEVVERANNTRYGLAAAVFTRDLDKAMYFTQALQAGTVWVNTYNIVTCHTPFGGFKESGNGRELGEDGLKAYTEVKTVTIKVPQKN 516          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: AL1B1_PONAB (Aldehyde dehydrogenase X, mitochondrial OS=Pongo abelii GN=ALDH1B1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.484e-14
Identity = 41/91 (45.05%), Postives = 54/91 (59.34%), Query Frame = 2
Query:   23 RXSRADPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV--QPVKN 289
            +  + +   E+   TR+GLAA VFT+  D A    +AL+AGTVW+N Y++     PFGG+K SG GRE G   L AY +VK V    P KN
Sbjct:  426 KFKKMEEVIERANTTRYGLAAAVFTRDLDKAMYFTQALQAGTVWVNTYNIVTCHTPFGGFKESGNGRELGEDGLKAYTEVKTVTIKVPQKN 516          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: ALDH_EMENI (Aldehyde dehydrogenase OS=Emericella nidulans GN=aldA PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 1.938e-14
Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 2
Query:   65 TRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            T +GLAA V TK+ +TA  +  AL+AGTVWIN Y++     PFGG+K SG+GRE G Y+L  Y Q+K V
Sbjct:  419 TDYGLAAAVHTKNVNTAIRVSNALKAGTVWINNYNMISYQAPFGGFKQSGLGRELGSYALENYTQIKTV 487          
The following BLAST results are available for this feature:
BLAST of EY665168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
AL1A7_RAT2.289e-1546.34Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norv... [more]
AL1A3_HUMAN2.289e-1549.40Aldehyde dehydrogenase family 1 member A3 OS=Homo ... [more]
AL1A2_CHICK2.989e-1546.43Retinal dehydrogenase 2 OS=Gallus gallus GN=ALDH1A... [more]
AL1A7_MOUSE3.904e-1546.34Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculu... [more]
AL1A2_RAT3.904e-1544.57Retinal dehydrogenase 2 OS=Rattus norvegicus GN=Al... [more]
AL1A2_MOUSE3.904e-1544.57Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2... [more]
ALDH_AGABI8.698e-1552.17Aldehyde dehydrogenase OS=Agaricus bisporus GN=ald... [more]
AL1B1_HUMAN1.136e-1445.05Aldehyde dehydrogenase X, mitochondrial OS=Homo sa... [more]
AL1B1_PONAB1.484e-1445.05Aldehyde dehydrogenase X, mitochondrial OS=Pongo a... [more]
ALDH_EMENI1.938e-1453.62Aldehyde dehydrogenase OS=Emericella nidulans GN=a... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-G11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665168 ID=EY665168; Name=EY665168; organism=Citrus sinensis; type=EST; length=425bp
GGTNCGCCTGCCAGTATCGGTCCGGNATTCCCGGGCCGACCCAGCGTCCG
AGAAGACATATAAAACACGCTTTGGTCTAGCTGCTGGGGTTTTCACCAAG
AGTGCAGACACTGCAAACACCATGATGCGTGCACTGAGAGCTGGGACTGT
ATGGATTAACTGCTACGACGTGTTTGATGCTGCTATTCCTTTCGGTGGGT
ACAAGCTGAGTGGCATAGGCCGGGAAAAGGGAATTTACAGCCTTAACGCT
TACTTGCAAGTAAAGGCCGTCGTTCAACCTGTGAAGAACCCAGCATGGCT
TTAGTTTCCTGAAGTTCCCCCTCCCTTTTAATCTGTGTTTATGAATAAGG
ACAGCGTGCTAATATCAGCTTGTAATTATGGAGCAAATGGATAATTTACT
TTAAAAGAAAAAAAAAAAAAAAAAA
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