EY665168

Overview
NameEY665168
Unique NameEY665168
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length425
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7410 contig Csv1_Contig7410:1575..1997. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: AL9A1_MOUSE (4-trimethylaminobutyraldehyde dehydrogenase OS=Mus musculus GN=Aldh9a1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.233e-13
Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = 2
Query:   50 EKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            E+   T FGLAAGVFT+    A+ +   L+AGT +IN Y+V    +PFGGYK SG GRE G  ++  Y Q+K V
Sbjct:  410 ERANDTTFGLAAGVFTRDIQRAHRVAAELQAGTCYINNYNVSPVELPFGGYKKSGFGRENGRVTIEYYSQLKTV 483          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: AL1A2_TAEGU (Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=ALDH1A2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.233e-13
Identity = 39/84 (46.43%), Postives = 49/84 (58.33%), Query Frame = 2
Query:   20 VRXSRADPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            +R    D   E+   + FGL A VFT   + A T+  A++AGTVWINCY+  +A  PFGG K SG GRE G   L  Y +VK V
Sbjct:  426 LRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGSK-SGNGREMGECGLREYSEVKTV 508          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: FTHFD_MOUSE (10-formyltetrahydrofolate dehydrogenase OS=Mus musculus GN=Aldh1l1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.141e-13
Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 2
Query:   38 DPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            D    +   T FGLA+GVFT+  + A  +   L+AGTV++N Y+  D A PFGG+K SG G++ G  +LN YL++K V
Sbjct:  821 DAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 898          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: ALDH_CLAHE (Aldehyde dehydrogenase OS=Cladosporium herbarum GN=CLAH10 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 8.141e-13
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 2
Query:   71 FGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            +GLAA V TK+ +TA  +  AL+AGTVW+N Y+     +PFGGYK SGIGRE G  +L  Y Q K V
Sbjct:  420 YGLAAAVHTKNLNTAIEVSNALKAGTVWVNTYNTLHHQMPFGGYKESGIGRELGEDALANYTQTKTV 486          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: AL1B1_BOVIN (Aldehyde dehydrogenase X, mitochondrial (Fragment) OS=Bos taurus GN=ALDH1B1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 8.141e-13
Identity = 39/91 (42.86%), Postives = 51/91 (56.04%), Query Frame = 2
Query:   23 RXSRADPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV--QPVKN 289
            +  + +   E+   TR+GLAA VFT+  D A    +AL+ GTVW+N Y+V     P GG+K  G GRE G   L AY +VK V    P KN
Sbjct:  420 KFKKIEEVIERADNTRYGLAAAVFTQDLDKAMYFTQALQTGTVWVNTYNVVTCHTPLGGFKEPGNGRELGEDGLKAYTEVKTVTIKVPQKN 510          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: BETB_RHISN (Betaine aldehyde dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=betB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.063e-12
Identity = 34/69 (49.28%), Postives = 45/69 (65.22%), Query Frame = 2
Query:   65 TRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            T FGL+AGVFT     A+ ++  L AGT+WIN Y++    IPFGG K SG GRE  + +LN Y ++K V
Sbjct:  408 TEFGLSAGVFTADLTRAHRVVDQLEAGTLWINTYNLAPVEIPFGGSKQSGFGRENSVAALNHYTELKTV 476          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: BETB1_RHIME (Betaine aldehyde dehydrogenase 1 OS=Rhizobium meliloti GN=betB1 PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.063e-12
Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 2
Query:   65 TRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV---VQPVKNP 292
            T FGL+AGVFT     A+ +   L AGT+WIN Y++    IPFGG K SG GRE  + +LN Y ++K V   + PV+ P
Sbjct:  408 TEFGLSAGVFTADLTRAHRVADRLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSVAALNHYTELKTVYVGMGPVEAP 486          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: BETB_VIBPA (Betaine aldehyde dehydrogenase OS=Vibrio parahaemolyticus GN=betB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.389e-12
Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = 2
Query:   50 EKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV 274
            E+   T +GLAAGVFT++   A+ ++  ++AG  W+N +    A +P GGYK SGIGRE G+ +L  Y Q K+V+
Sbjct:  401 ERANDTDYGLAAGVFTQNLSRAHRVIHKIQAGICWVNAWGDSPAEMPVGGYKQSGIGRENGVETLKHYTQTKSVL 475          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: BETB_VIBVY (Betaine aldehyde dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=betB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.814e-12
Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 2
Query:   38 DPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            D    +   T++GLAAGVFT++   A+ ++  L+AG  WIN +    A +P GGYKLSGIGRE G  +L  Y Q K+V
Sbjct:  397 DEVIARANNTQYGLAAGVFTQNLSKAHRVIHQLQAGICWINTWGNSPAEMPVGGYKLSGIGRENGQETLLHYTQTKSV 474          
BLAST of EY665168 vs. ExPASy Swiss-Prot
Match: BETB_VIBVU (Betaine aldehyde dehydrogenase OS=Vibrio vulnificus GN=betB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.814e-12
Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 2
Query:   38 DPASEKTYKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 271
            D    +   T++GLAAGVFT++   A+ ++  L+AG  WIN +    A +P GGYKLSGIGRE G  +L  Y Q K+V
Sbjct:  397 DEVIARANNTQYGLAAGVFTQNLSKAHRVIHQLQAGICWINTWGNSPAEMPVGGYKLSGIGRENGQETLLHYTQTKSV 474          
The following BLAST results are available for this feature:
BLAST of EY665168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
AL9A1_MOUSE6.233e-1348.654-trimethylaminobutyraldehyde dehydrogenase OS=Mus... [more]
AL1A2_TAEGU6.233e-1346.43Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=... [more]
FTHFD_MOUSE8.141e-1344.8710-formyltetrahydrofolate dehydrogenase OS=Mus mus... [more]
ALDH_CLAHE8.141e-1353.73Aldehyde dehydrogenase OS=Cladosporium herbarum GN... [more]
AL1B1_BOVIN8.141e-1342.86Aldehyde dehydrogenase X, mitochondrial (Fragment)... [more]
BETB_RHISN1.063e-1249.28Betaine aldehyde dehydrogenase OS=Rhizobium sp. (s... [more]
BETB1_RHIME1.063e-1246.84Betaine aldehyde dehydrogenase 1 OS=Rhizobium meli... [more]
BETB_VIBPA1.389e-1244.00Betaine aldehyde dehydrogenase OS=Vibrio parahaemo... [more]
BETB_VIBVY1.814e-1246.15Betaine aldehyde dehydrogenase OS=Vibrio vulnificu... [more]
BETB_VIBVU1.814e-1246.15Betaine aldehyde dehydrogenase OS=Vibrio vulnificu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-G11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665168 ID=EY665168; Name=EY665168; organism=Citrus sinensis; type=EST; length=425bp
GGTNCGCCTGCCAGTATCGGTCCGGNATTCCCGGGCCGACCCAGCGTCCG
AGAAGACATATAAAACACGCTTTGGTCTAGCTGCTGGGGTTTTCACCAAG
AGTGCAGACACTGCAAACACCATGATGCGTGCACTGAGAGCTGGGACTGT
ATGGATTAACTGCTACGACGTGTTTGATGCTGCTATTCCTTTCGGTGGGT
ACAAGCTGAGTGGCATAGGCCGGGAAAAGGGAATTTACAGCCTTAACGCT
TACTTGCAAGTAAAGGCCGTCGTTCAACCTGTGAAGAACCCAGCATGGCT
TTAGTTTCCTGAAGTTCCCCCTCCCTTTTAATCTGTGTTTATGAATAAGG
ACAGCGTGCTAATATCAGCTTGTAATTATGGAGCAAATGGATAATTTACT
TTAAAAGAAAAAAAAAAAAAAAAAA
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