EY665160

Overview
NameEY665160
Unique NameEY665160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665160 vs. ExPASy Swiss-Prot
Match: AT8B4_HUMAN (Probable phospholipid-transporting ATPase IM OS=Homo sapiens GN=ATP8B4 PE=2 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 2.083e-16
Identity = 60/198 (30.30%), Postives = 101/198 (51.01%), Query Frame = 2
Query:   17 LYQ*GVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAMEHQAFNDDGKTVGRDIFGATMYTCIVWVVNLQLALAISYFTLIQHIFIWGSIALWY--LFMLAYGAITPTFSTNAYKVFIEA--LAPAPLFWLVTLFVAISTLIPYFAYSAIQMRFFPMYHGMI-QWIRHEGQSNDPEYCDMVRQRSIRPTTVGSTARFS 595
            LY+ G  N+LF+ R+ F  + +G+Y+++++FF    A  + A  D         F  TM T +V VV++Q+AL  SY+T I H+FIWGSIA+++  LF +    I   F  N +     A         WLV L   +++++P  A+  +++  +P     I +W + + ++  P         S RP T  S++R S
Sbjct:  940 LYKPGQLNLLFNKRKFFICVLHGIYTSLVLFFIPYGAFYNVAGEDGQHIADYQSFAVTMATSLVIVVSVQIALDTSYWTFINHVFIWGSIAIYFSILFTMHSNGIFGIF-PNQFPFVGNARHSLTQKCIWLVILLTTVASVMPVVAFRFLKVDLYPTLSDQIRRWQKAQKKARPPS--------SRRPRTRRSSSRRS 1128          
BLAST of EY665160 vs. ExPASy Swiss-Prot
Match: AT11A_MOUSE (Probable phospholipid-transporting ATPase IH OS=Mus musculus GN=Atp11a PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.009e-15
Identity = 50/166 (30.12%), Postives = 78/166 (46.99%), Query Frame = 2
Query:   17 LYQ*GVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAMEHQAFNDDGKTVGRDIFGATMYTCIVWVVNLQLALAISYFTLIQHIFIWGSIALWYLFMLAYGAITPTFST--NAYKVFIEALAPAPLFWLVTLFVAISTLIPYFAYSAIQMRFFPMYHGMIQWIRHE 508
            LY+   +N L  WR    W F G++ A++ FF      E+     +G+  G   FG  ++T +V  V L+LAL   Y+T I H  IWGS+  +  F L +G +   F +    Y VFI  L+  P  WL  + +    L+P      +  + +P      Q I+H+
Sbjct:  953 LYRDIAKNALLRWRVFIYWTFLGVFDALVFFFGAYFIFENTTVTINGQMFGNWTFGTLVFTVMVLTVTLKLALDTHYWTWINHFVIWGSLLFYIAFSLLWGGVIWPFLSYQRMYYVFISMLSSGPA-WLGIILLVTVGLLPDVLKKVLCRQLWPTATERTQNIQHQ 1117          
BLAST of EY665160 vs. ExPASy Swiss-Prot
Match: AT8A1_HUMAN (Probable phospholipid-transporting ATPase IA OS=Homo sapiens GN=ATP8A1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.702e-15
Identity = 56/168 (33.33%), Postives = 89/168 (52.98%), Query Frame = 2
Query:   35 QNVLFSWRRIFGWM--FNGLYSAIIIFFFCKKAMEHQAFNDDGKTVGRDIFGATMYTCIVWVVNLQLALAISYFTLIQHIFIWGSIALWYLFMLAYGAITPTFSTNAYKVFIEA--LAPAPLFWLVTLFVAISTLIPYFAYSAIQMRFFPMYHGMIQWIRHEGQSNDP 526
            QN L    ++F W+   NGL+ ++I+F+F  KA+++     +GKT    + G  +YT +V  V L+  L  SY+T   HI IWGSIALW +F   Y ++ P     A  +  EA  L  + +FW+  LF+ +++L+    Y  I+   F      +Q +  E +S DP
Sbjct:  931 QNALDFNTKVF-WVHCLNGLFHSVILFWFPLKALQYGTAFGNGKTSDYLLLGNFVYTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAIPM-APDMSGEAAMLFSSGVFWMGLLFIPVASLLLDVVYKVIKRTAFKTLVDEVQEL--EAKSQDP 1094          
BLAST of EY665160 vs. ExPASy Swiss-Prot
Match: AT8A1_BOVIN (Probable phospholipid-transporting ATPase IA OS=Bos taurus GN=ATP8A1 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.702e-15
Identity = 55/168 (32.74%), Postives = 90/168 (53.57%), Query Frame = 2
Query:   35 QNVLFSWRRIFGWM--FNGLYSAIIIFFFCKKAMEHQAFNDDGKTVGRDIFGATMYTCIVWVVNLQLALAISYFTLIQHIFIWGSIALWYLFMLAYGAITPTFSTNAYKVFIEA--LAPAPLFWLVTLFVAISTLIPYFAYSAIQMRFFPMYHGMIQWIRHEGQSNDP 526
            QN L    ++F W+   NGL+ ++I+F+F  KA+++    ++G+T    + G  +YT +V  V L+  L  SY+T   HI IWGSIALW +F   Y ++ P     A  +  EA  L  + +FW+  LF+ +++L+    Y  I+   F      +Q +  E +S DP
Sbjct:  916 QNALDFNTKVF-WVHCLNGLFHSVILFWFPLKALQYGTVFENGRTSDYLLLGNFVYTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAVPM-APDMSGEAAMLFSSGVFWMGLLFIPVASLLLDVVYKVIKRTAFKTLVDEVQEL--EAKSQDP 1079          
BLAST of EY665160 vs. ExPASy Swiss-Prot
Match: ALA3_ARATH (Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 48/177 (27.12%), Postives = 84/177 (47.46%), Query Frame = 2
Query:   17 LYQ*GVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAMEHQAFNDDGKTVGRDIFGATMYTCIVWVVNLQLALAISYFTLIQHIFIWGSIALWYLFMLAY-GAITPTFSTNAYKVFIEALAPAPLFWLVTLFVAISTLIPYFAYSAIQMRFFPMYHGMIQWI-RHEGQSNDPEYCDM 541
            LY+ G++N  F WR +  W  + +Y +++ + F   +    A N  GK  G       ++TC+V  VN+++ L  +  T   +I + GSI  W +F   Y G +TP          I  L     F+   L V I +L+  F +  ++  FFP  + ++Q I RHE  ++  +  ++
Sbjct:  970 LYREGIRNSFFKWRVVAVWATSAVYQSLVCYLFVTTS-SFGAVNSSGKVFGLWDVSTMVFTCLVIAVNVRILLMSNSITRWHYITVGGSILAWLVFAFVYCGIMTPHDRNENVYFVIYVLMSTFYFYFTLLLVPIVSLLGDFIFQGVERWFFPYDYQIVQEIHRHESDASKADQLEV 1145          
BLAST of EY665160 vs. ExPASy Swiss-Prot
Match: AT8A1_MOUSE (Probable phospholipid-transporting ATPase IA OS=Mus musculus GN=Atp8a1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.678e-14
Identity = 55/168 (32.74%), Postives = 88/168 (52.38%), Query Frame = 2
Query:   35 QNVLFSWRRIFGWM--FNGLYSAIIIFFFCKKAMEHQAFNDDGKTVGRDIFGATMYTCIVWVVNLQLALAISYFTLIQHIFIWGSIALWYLFMLAYGAITPTFSTNAYKVFIEA--LAPAPLFWLVTLFVAISTLIPYFAYSAIQMRFFPMYHGMIQWIRHEGQSNDP 526
            QN L    ++F W+   NGL+ ++I+F+F  KA+++     +GKT    + G  +YT +V  V L+  L  SY+T   HI IWGSIALW +F   Y ++ P     A  +  EA  L  + +FW+  L + +++L+    Y  I+   F      +Q +  E +S DP
Sbjct:  916 QNALDFNTKVF-WVHCLNGLFHSVILFWFPLKALQYGTVFGNGKTSDYLLLGNFVYTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAVPM-APDMSGEAAMLFSSGVFWVGLLSIPVASLLLDVLYKVIKRTAFKTLVDEVQEL--EAKSQDP 1079          
BLAST of EY665160 vs. ExPASy Swiss-Prot
Match: AT8B2_HUMAN (Probable phospholipid-transporting ATPase ID OS=Homo sapiens GN=ATP8B2 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11
Identity = 42/156 (26.92%), Postives = 76/156 (48.72%), Query Frame = 2
Query:   17 LYQ*GVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAMEHQAFNDDGKTVGRDIFGATMYTCIVWVVNLQLALAISYFTLIQHIFIWGSIALWY--LFMLAYGAITPTFSTNAYKVFIEA--LAPAPLFWLVTLFVAISTLIPYFAYSAIQMRFFP 472
            LY+ G  N+LF+ R  F  +  G+Y+++++FF           +D  +      F  T+ T +V VV++Q+ L   Y+T I H FIWGS+A+++  LF +    +   F  N ++    A      P  WL  +   +  ++P  A+  +++   P
Sbjct:  958 LYEPGQLNLLFNKREFFICIAQGIYTSVLMFFIPYGVFADATRDDGTQLADYQSFAVTVATSLVIVVSVQIGLDTGYWTAINHFFIWGSLAVYFAILFAMHSNGLFDMF-PNQFRFVGNAQNTLAQPTVWLTIVLTTVVCIMPVVAFRFLRLNLKP 1112          
The following BLAST results are available for this feature:
BLAST of EY665160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
AT8B4_HUMAN2.083e-1630.30Probable phospholipid-transporting ATPase IM OS=Ho... [more]
AT11A_MOUSE3.009e-1530.12Probable phospholipid-transporting ATPase IH OS=Mu... [more]
AT8A1_HUMAN6.702e-1533.33Probable phospholipid-transporting ATPase IA OS=Ho... [more]
AT8A1_BOVIN6.702e-1532.74Probable phospholipid-transporting ATPase IA OS=Bo... [more]
ALA3_ARATH3.326e-1427.12Phospholipid-transporting ATPase 3 OS=Arabidopsis ... [more]
AT8A1_MOUSE9.678e-1432.74Probable phospholipid-transporting ATPase IA OS=Mu... [more]
AT8B2_HUMAN2.018e-1126.92Probable phospholipid-transporting ATPase ID OS=Ho... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-G02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665160 ID=EY665160; Name=EY665160; organism=Citrus sinensis; type=EST; length=920bp
CCACGCGTCCGCTCTACTTTACCAATAAGGGGTGCAAAATGTCCTCTTCA
GCTGGCGCCGGATATTTGGTTGGATGTTTAATGGGCTGTACAGTGCCATT
ATCATTTTCTTCTTCTGTAAGAAAGCAATGGAGCATCAGGCATTCAACGA
TGATGGGAAAACTGTTGGAAGGGATATTTTCGGTGCTACAATGTATACAT
GCATTGTCTGGGTTGTGAACTTGCAGTTGGCACTCGCAATTAGCTACTTC
ACTCTTATACAACACATTTTCATCTGGGGTTCAATTGCTCTGTGGTATCT
TTTTATGTTGGCATATGGGGCCATTACTCCCACCTTTTCTACCAACGCTT
ACAAAGTCTTCATTGAAGCCCTTGCACCTGCTCCTTTGTTCTGGCTGGTC
ACGCTCTTCGTGGCGATCTCTACCCTAATCCCATACTTCGCATACTCTGC
AATCCAGATGAGGTTCTTTCCCATGTATCATGGGATGATACAGTGGATAA
GGCATGAAGGGCAATCAAATGATCCTGAGTACTGTGATATGGTGAGGCAA
AGATCAATTCGGCCAACCACTGTGGGTTCCACAGCTCGTTTTTCTAGAAG
AGTAATCGCGTAAATGATAGAAATCAAAACGGGAACCCCATGAGCACCTC
GTGATAAACATTGCCTCTAAACAAATGATGGCTGTATATATCTGCCCAGA
AATCTCTGCTCCTGATATGACTGNATTGAACTATAGGTGGGTTTTTCCGA
TGAATAAGTATGCCCNTTAGAGCATAGATGATGGTACAGAAGCCTTTTTA
GCTGGAACATATGCCGGGAGGGTAGAAAAGCCCTAANTGCCGAATTTTTT
GTTCTTTGGAGTTACACTTACCCGTTTTTTTGATCTTGGTATACTCCGAA
TTTATTTTTAAATTTAGAGT
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