EY665151

Overview
NameEY665151
Unique NameEY665151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.051e-22
Identity = 83/225 (36.89%), Postives = 110/225 (48.89%), Query Frame = 2 
Query:  197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPV 832
            G DRP +    S+Q+ SYL G  PGDYG+D  GLS DPE    F   + L   EVI+ R+AMLGA+G + PEIL K G+  +     WF+ G  I   G  +Y  +P          ++ +++ LMGF E  R       G +G+              D  YPG   F+PLGL  D  +  +   + +KNGRL M    G+FVQ  VTG  P        ADPV
Sbjct:   49 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFPEILSKNGV--KFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR----VGGGPLGEGL------------DKVYPGGA-FDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPV 248
[Close]
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.051e-22
Identity = 83/225 (36.89%), Postives = 110/225 (48.89%), Query Frame = 2 
Query:  197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPV 832
            G DRP +    S+Q+ SYL G  PGDYG+D  GLS DPE    F   + L   EVI+ R+AMLGA+G + PEIL K G+  +     WF+ G  I   G  +Y  +P          ++ +++ LMGF E  R       G +G+              D  YPG   F+PLGL  D  +  +   + +KNGRL M    G+FVQ  VTG  P        ADPV
Sbjct:   49 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFPEILSKNGV--KFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYR----VGGGPLGEGL------------DKVYPGGA-FDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPV 248
[Close]
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 3.051e-22
Identity = 85/243 (34.98%), Postives = 119/243 (48.97%), Query Frame = 2 
Query:  146 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835
            RK +   + A++     GADR L+    S +  SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+  +     WF+ G  I   G  +Y  +P          ++ +++ LMG  E  R       G +G+              DP YPG   F+PLGL  D ++  +   + +KNGRL M    G+FVQ  VTG  P        ADPVN
Sbjct:   30 RKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 247
[Close]
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.984e-22
Identity = 87/236 (36.86%), Postives = 115/236 (48.73%), Query Frame = 2 
Query:  164 VRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPV 832
            V++A T  +  G DRP +    S Q  SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PEIL K G+  +     WF+ G  I   G  +Y  +P          ++  ++ LMGF E  R       G +G+              DP YPG   F+PLGL  D  +  +   + +KNGRL M    G+FVQ  VTG  P        ADPV
Sbjct:   41 VKSAPTS-IWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPEILSKNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR----VGGGPLGEGL------------DPIYPGGA-FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPV 250
[Close]
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.796e-22
Identity = 83/225 (36.89%), Postives = 110/225 (48.89%), Query Frame = 2 
Query:  197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPV 832
            G DRP +    S+Q+ SYL G  PGDYG+D  GLS DPE    F   + L   EVI+ R+AMLGA+G + PEIL K G+   +    WF+ G  I   G  +Y  +P          ++  ++ LMGF E  R       G +G+              D  YPG   F+PLGL  D ++  +   + +KNGRL M    G+FVQ  VTG  P        ADPV
Sbjct:   51 GEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCVFPEILSKNGVTFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYR----VGGGPLGEGL------------DKIYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPV 250
[Close]
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.876e-22
Identity = 83/225 (36.89%), Postives = 110/225 (48.89%), Query Frame = 2 
Query:  197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPV 832
            G DRP +    S+Q+ SYL G  PGDYG+D  GLS DPE    F   + L   EVI+ R+AMLGA+G + PEIL K G+   +    WF+ G  I   G  +Y  +P          ++  ++ LMGF E  R       G +G+              D  YPG   F+PLGL  D ++  +   + +KNGRL M    G+FVQ  VTG  P        ADPV
Sbjct:   23 GEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCVFPEILSKNGVTFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYR----VGGGPLGEGL------------DKIYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPV 222
[Close]
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.159e-21
Identity = 85/235 (36.17%), Postives = 116/235 (49.36%), Query Frame = 2 
Query:  170 AASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835
            +AST P   G DR L+    S +  SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+  +     WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G+              DP YPG   F+PLGL +D ++  +   + +KNGRL M    G+FVQ  VTG  P        ADPVN
Sbjct:   52 SASTSPW-YGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPEN---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGV--KFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG----GPLGEVT------------DPIYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 260
[Close]
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.159e-21
Identity = 84/225 (37.33%), Postives = 108/225 (48.00%), Query Frame = 2 
Query:  197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPV 832
            G DRP +    S+Q  SYL G  PGDYG+D  GLS DPE    F   + L   EVI+ R+AMLGA+G   PE+L K G+  +     WF+ G  I   G  +Y  +P          ++  ++ LMGF E  R       G +G+              DP YPG   F+PLGL  D  S  +   + +KNGRL M    G+FVQ  VTG  P        ADPV
Sbjct:   51 GPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCTFPELLEKNGV--KFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYR----VGGGPLGEGL------------DPLYPGGA-FDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPV 250
[Close]
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.514e-21
Identity = 79/213 (37.09%), Postives = 106/213 (49.77%), Query Frame = 2 
Query:  197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAP 799
            G DRP +    S+Q+ SYL G  PGDYG+D  GLS DPE    F   + L   EVI+ R+AMLGA+G + PEIL K G+  +     WF+ G  I   G  +Y  +P          ++  ++ LMGF E  R       G +G+              D  YPG   F+PLGL  D ++  +   + +KNGRL M    G+FVQ  VTG  P
Sbjct:   51 GEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCVFPEILSKNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYR----VGGGPLGEGL------------DKIYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
[Close]
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.514e-21
Identity = 85/243 (34.98%), Postives = 117/243 (48.15%), Query Frame = 2 
Query:  146 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835
            RK +   + AS+     G DR  +    S +S SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+  +     WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G+              DP YPG   F+PLGL  D ++  +   + +KNGRL M    G+FVQ  VTG  P        ADPVN
Sbjct:   38 RKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FSKNREL---EVIHSRWAMLGALGCVFPELLSRNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 255
The following BLAST results are available for this feature:
BLAST of EY665151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
CB23_ORYSJ3.051e-2236.89Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB23_ORYSI3.051e-2236.89Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB22_ORYSJ3.051e-2234.98Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB21_GOSHI3.984e-2236.86Chlorophyll a-b binding protein 151, chloroplastic... [more]
CB26_PETSP6.796e-2236.89Chlorophyll a-b binding protein 37, chloroplastic ... [more]
CB25_SOLLC8.876e-2236.89Chlorophyll a-b binding protein 5, chloroplastic (... [more]
CB2B_PINSY1.159e-2136.17Chlorophyll a-b binding protein type 2 member 1B, ... [more]
CB215_PEA1.159e-2137.33Chlorophyll a-b binding protein 215, chloroplastic... [more]
CB24_SOLLC1.514e-2137.09Chlorophyll a-b binding protein 4, chloroplastic O... [more]
CB22_PEA1.514e-2134.98Chlorophyll a-b binding protein AB80, chloroplasti... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-F05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665151 ID=EY665151; Name=EY665151; organism=Citrus sinensis; type=EST; length=869bp
ATCGTATTGAAGTAGAGAAACAGAGGAAAAAAGAAAATTAAAAATGGCAA
CCCAAGCTTTGGTTTCATCATCTCTTACATCTTCAGTGGAGACTGCGAGA
CAAATTCTTGGAGCAAGATCAGCTCAATCCCCAACTGGGTCATCAAGAAA
AGGTTCCTTTGTTGTTAGGGCAGCTTCTACTCCTCCTGTTAAGCAAGGAG
CAGACAGACCGTTGTGGTTTGCATCCAAACAAAGCCTTTCATACTTGGAT
GGCAGCCTCCCCGGAGACTATGGATTCGACCCACTTGGTCTCTCAGACCC
TGAAGGCACAGGAGGGTTCATTGAGCCAAAATGGCTGGCCTACGGCGAGG
TCATCAACGGTCGTTATGCCATGTTGGGAGCTGTGGGAGCCATTGCACCG
GAGATTCTTGGCAAGGCAGGCCTCATTCCGCAAGATACTGCCCTGGCCTG
GTTCCAAACCGGTGTGATCCCCCCAGCGGGAACATACAACTACTGGGCAG
ACCCTTACACACTTTTCGTCCTGGAAATGGCACTCATGGGATTTGCCGAG
CACCGGAGATTCCAAGACTGGGCAAATCCAGGATCAATGGGGCAGGCATA
CTTCCTCGGATTCGAGAAATACTTGGGATGATCCGGCGATCCGGCTTACC
CTGGNAGACCTCTATTCAACCCTCTGGGTCTTGGGAAAGATGANAAGTCA
ATGAAGGATTTCNAAGCTCAGGGAGTGAAGAATGGGAGATTGGNCATGTT
GGGGCATCTGGGGTACTTTGTTCAAGGGTCTGTTACAGGAGTGGCCCCTA
CANAACCTATNGNATCCTNGGCTGATCCTGTAAACACATGTTTTGACTAN
CCTCATTTCACTGAAAGGA
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