EY665151

Overview
NameEY665151
Unique NameEY665151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.417e-19
Identity = 79/225 (35.11%), Postives = 109/225 (48.44%), Query Frame = 2
Query:  197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPV 832
            G DRP +    S+ + SYL G  PGDYG+D   +S DPE    F + + L   EVI+ R+AMLGA+G + PE+L K GL  +     WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G++G+              DP  PG   F+PLGL  D ++  +   + +KNGRL M    G+FVQ  VTG  P        ADPV
Sbjct:   52 GPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAKNGL--KFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYR----VGGGTLGEGL------------DPLLPGGA-FDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPV 251          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.851e-19
Identity = 81/222 (36.49%), Postives = 107/222 (48.20%), Query Frame = 2
Query:  218 FASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGK-AGLIPQDTALAWFQTGV-IPPAGTYNYWADPYTL--------FVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADP-VNTCF 844
            F+   +  YL G  PGDYG+D  GLS DP+    + E       E+I+ R+A+LGA+G + PE+L + AG+  Q     WF+ G  I   G  NY  +   +          +++ LMG AE  R    AN GS G    L          D  YPG P F+PLGL  D  +  +   + +KNGRL M   LG+FVQ  VTG  P        ADP VN  F
Sbjct:   45 FSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREI------ELIHARWALLGALGILTPELLSQYAGV--QFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYR----ANGGSEGFLDDL----------DTLYPGGP-FDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAF 243          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.417e-19
Identity = 84/260 (32.31%), Postives = 119/260 (45.77%), Query Frame = 2
Query:  113 ARSAQSPTGSSRKGSFVVRAASTP--PVKQGA-----DRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835
            A +  S +  +R G   +R   T   PV  G+     DR  +    S ++ SYL G  PGDYG+D  GLS    T  F + + L   EVI+ R+ MLGA+G + PE+  + G+  +     WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G+              DP YPG   F+PLGL  D ++  +   + +KNGRL M    G+FVQ  VTG  P        ADPVN
Sbjct:   17 AVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPAT--FAKNRKL---EVIHCRWTMLGALGCVFPELFARNGV--KFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----GPLGEVI------------DPLYPGGS-FDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.157e-19
Identity = 73/213 (34.27%), Postives = 98/213 (46.01%), Query Frame = 2
Query:  197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADPYTL--------FVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAP 799
            G DR  W    S  + +YL G  PGDYG+D  GLS DPE    + E       EVI+ R+A+LGA+G + PE+L     +     + WF+ G  I   G  +Y   P  +          +++ LMG  E  R     N G  G+              DP YPG   F+PLGL  D  +  +   + +KNGRL M    G+FVQ  VTG  P
Sbjct:   41 GPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYREL------EVIHARWALLGALGILTPELLSTYAGVKFGEPV-WFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYR----VNGGPAGEGL------------DPLYPGES-FDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGP 229          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.157e-19
Identity = 79/226 (34.96%), Postives = 109/226 (48.23%), Query Frame = 2
Query:  197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835
            G DR  +    S ++ SYL G  PGDYG+D   LS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+  +     WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G+              DP YPG   F+PLGL  D ++  +   + +KNGRL M    G+FVQ  VTG  P        ADPVN
Sbjct:   53 GPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.157e-19
Identity = 81/238 (34.03%), Postives = 112/238 (47.06%), Query Frame = 2
Query:  161 VVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835
            V +  S+     G DR  +    S +  SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+  +     WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G+              DP YPG   F+PLGL  D ++  +   + +KNGRL M    G+FVQ  VTG  P        A PVN
Sbjct:   37 VTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLSRNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAG----GPLGEVT------------DPIYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVN 249          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.157e-19
Identity = 75/210 (35.71%), Postives = 102/210 (48.57%), Query Frame = 2
Query:  239 SYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835
            SYL G  PGDYG+D  GLS DPE    F + + L   EVI+  +AMLGA+G + PE+L + G+  +     WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G+              DP YPG   F+PLGL  D ++  +   + +KNGRL M    G+FVQ  VTG  P        ADPVN
Sbjct:    8 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSTWAMLGALGCVFPELLSRNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG----GPLGEVT------------DPIYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 192          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.385e-19
Identity = 76/215 (35.35%), Postives = 105/215 (48.84%), Query Frame = 2
Query:  224 SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835
            S +S SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+  +     WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G+              DP YPG   F+PLGL +  ++  +   + +KNGRL M    G+FV   VTG  P        ADPVN
Sbjct:   25 SGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLSRNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVN 214          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.033e-19
Identity = 72/214 (33.64%), Postives = 100/214 (46.73%), Query Frame = 2
Query:  197 GADRPLW---FASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADPYTLFV--------LEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAP 799
            G +R  W   ++   + +YL G  PGDYG+D  GLS DPE    + E       E+I+ R+AMLGA+G   PE+L K+G   +     WF+ G  I   G  +Y  +P  +          +++ LMG  E  R     N G  G+              DP YPG   F+PLGL  D  +  +   + +KNGRL      G+FVQ  VTG  P
Sbjct:   38 GPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYREL------ELIHARWAMLGALGCQTPELLAKSGT--KFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYR----VNGGPAGEGL------------DPLYPGES-FDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGP 226          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.185e-19
Identity = 77/232 (33.19%), Postives = 105/232 (45.26%), Query Frame = 2
Query:  140 SSRKGSFVV-RAASTPPVKQGADRPL-WFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADPYTL--------FVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAP 799
            S++KG+  V +++S+     G D    W    Q      G  PGDYG+D  GLS DPE    + E       E+I+ R  +LGA+G + PE+L     I    A  WF+ G  I   G  NY  +P  +          +++ LMG  E  R     N G  G+              DP YPG   F+PLGL  D  +  +   + +KNGRL M   LG+FVQ  VTG  P
Sbjct:   39 STKKGAKAVSKSSSSANQFYGPDATSGWDLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYREL------ELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYR----VNGGPAGEGL------------DPLYPGEA-FDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGP 247          
The following BLAST results are available for this feature:
BLAST of EY665151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
CB21_PINTH1.417e-1935.11Chlorophyll a-b binding protein type I, chloroplas... [more]
CB2_DUNTE1.851e-1936.49Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB21_PETSP2.417e-1932.31Chlorophyll a-b binding protein 13, chloroplastic ... [more]
CB2_CHLMO3.157e-1934.27Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB25_PETSP3.157e-1934.96Chlorophyll a-b binding protein 91R, chloroplastic... [more]
CB23_SOYBN3.157e-1934.03Chlorophyll a-b binding protein 3, chloroplastic O... [more]
CB22_CUCSA3.157e-1935.71Chlorophyll a-b binding protein of LHCII type 1 (F... [more]
CB21_PEA5.385e-1935.35Chlorophyll a-b binding protein AB96 (Fragment) OS... [more]
CB2_CHLRE7.033e-1933.64Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB2_DUNSA9.185e-1933.19Chlorophyll a-b binding protein of LHCII type I, c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-F05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665151 ID=EY665151; Name=EY665151; organism=Citrus sinensis; type=EST; length=869bp
ATCGTATTGAAGTAGAGAAACAGAGGAAAAAAGAAAATTAAAAATGGCAA
CCCAAGCTTTGGTTTCATCATCTCTTACATCTTCAGTGGAGACTGCGAGA
CAAATTCTTGGAGCAAGATCAGCTCAATCCCCAACTGGGTCATCAAGAAA
AGGTTCCTTTGTTGTTAGGGCAGCTTCTACTCCTCCTGTTAAGCAAGGAG
CAGACAGACCGTTGTGGTTTGCATCCAAACAAAGCCTTTCATACTTGGAT
GGCAGCCTCCCCGGAGACTATGGATTCGACCCACTTGGTCTCTCAGACCC
TGAAGGCACAGGAGGGTTCATTGAGCCAAAATGGCTGGCCTACGGCGAGG
TCATCAACGGTCGTTATGCCATGTTGGGAGCTGTGGGAGCCATTGCACCG
GAGATTCTTGGCAAGGCAGGCCTCATTCCGCAAGATACTGCCCTGGCCTG
GTTCCAAACCGGTGTGATCCCCCCAGCGGGAACATACAACTACTGGGCAG
ACCCTTACACACTTTTCGTCCTGGAAATGGCACTCATGGGATTTGCCGAG
CACCGGAGATTCCAAGACTGGGCAAATCCAGGATCAATGGGGCAGGCATA
CTTCCTCGGATTCGAGAAATACTTGGGATGATCCGGCGATCCGGCTTACC
CTGGNAGACCTCTATTCAACCCTCTGGGTCTTGGGAAAGATGANAAGTCA
ATGAAGGATTTCNAAGCTCAGGGAGTGAAGAATGGGAGATTGGNCATGTT
GGGGCATCTGGGGTACTTTGTTCAAGGGTCTGTTACAGGAGTGGCCCCTA
CANAACCTATNGNATCCTNGGCTGATCCTGTAAACACATGTTTTGACTAN
CCTCATTTCACTGAAAGGA
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