EY665151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.417e-19 Identity = 79/225 (35.11%), Postives = 109/225 (48.44%), Query Frame = 2 Query: 197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPV 832 G DRP + S+ + SYL G PGDYG+D +S DPE F + + L EVI+ R+AMLGA+G + PE+L K GL + WF+ G I G +Y +P ++ ++ LMG E R G++G+ DP PG F+PLGL D ++ + + +KNGRL M G+FVQ VTG P ADPV Sbjct: 52 GPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAKNGL--KFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYR----VGGGTLGEGL------------DPLLPGGA-FDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPV 251
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.851e-19 Identity = 81/222 (36.49%), Postives = 107/222 (48.20%), Query Frame = 2 Query: 218 FASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGK-AGLIPQDTALAWFQTGV-IPPAGTYNYWADPYTL--------FVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADP-VNTCF 844 F+ + YL G PGDYG+D GLS DP+ + E E+I+ R+A+LGA+G + PE+L + AG+ Q WF+ G I G NY + + +++ LMG AE R AN GS G L D YPG P F+PLGL D + + + +KNGRL M LG+FVQ VTG P ADP VN F Sbjct: 45 FSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREI------ELIHARWALLGALGILTPELLSQYAGV--QFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYR----ANGGSEGFLDDL----------DTLYPGGP-FDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAF 243
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.417e-19 Identity = 84/260 (32.31%), Postives = 119/260 (45.77%), Query Frame = 2 Query: 113 ARSAQSPTGSSRKGSFVVRAASTP--PVKQGA-----DRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835 A + S + +R G +R T PV G+ DR + S ++ SYL G PGDYG+D GLS T F + + L EVI+ R+ MLGA+G + PE+ + G+ + WF+ G I G +Y +P ++ ++ LMG E R G +G+ DP YPG F+PLGL D ++ + + +KNGRL M G+FVQ VTG P ADPVN Sbjct: 17 AVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPAT--FAKNRKL---EVIHCRWTMLGALGCVFPELFARNGV--KFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----GPLGEVI------------DPLYPGGS-FDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.157e-19 Identity = 73/213 (34.27%), Postives = 98/213 (46.01%), Query Frame = 2 Query: 197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADPYTL--------FVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAP 799 G DR W S + +YL G PGDYG+D GLS DPE + E EVI+ R+A+LGA+G + PE+L + + WF+ G I G +Y P + +++ LMG E R N G G+ DP YPG F+PLGL D + + + +KNGRL M G+FVQ VTG P Sbjct: 41 GPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYREL------EVIHARWALLGALGILTPELLSTYAGVKFGEPV-WFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYR----VNGGPAGEGL------------DPLYPGES-FDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGP 229
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.157e-19 Identity = 79/226 (34.96%), Postives = 109/226 (48.23%), Query Frame = 2 Query: 197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835 G DR + S ++ SYL G PGDYG+D LS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ + WF+ G I G +Y +P ++ ++ LMG E R G +G+ DP YPG F+PLGL D ++ + + +KNGRL M G+FVQ VTG P ADPVN Sbjct: 53 GPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----GPLGEVV------------DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.157e-19 Identity = 81/238 (34.03%), Postives = 112/238 (47.06%), Query Frame = 2 Query: 161 VVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835 V + S+ G DR + S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ + WF+ G I G +Y +P ++ ++ LMG E R G +G+ DP YPG F+PLGL D ++ + + +KNGRL M G+FVQ VTG P A PVN Sbjct: 37 VTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLSRNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAG----GPLGEVT------------DPIYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVN 249
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.157e-19 Identity = 75/210 (35.71%), Postives = 102/210 (48.57%), Query Frame = 2 Query: 239 SYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835 SYL G PGDYG+D GLS DPE F + + L EVI+ +AMLGA+G + PE+L + G+ + WF+ G I G +Y +P ++ ++ LMG E R G +G+ DP YPG F+PLGL D ++ + + +KNGRL M G+FVQ VTG P ADPVN Sbjct: 8 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSTWAMLGALGCVFPELLSRNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG----GPLGEVT------------DPIYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 192
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.385e-19 Identity = 76/215 (35.35%), Postives = 105/215 (48.84%), Query Frame = 2 Query: 224 SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835 S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ + WF+ G I G +Y +P ++ ++ LMG E R G +G+ DP YPG F+PLGL + ++ + + +KNGRL M G+FV VTG P ADPVN Sbjct: 25 SGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLSRNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG----GPLGEVV------------DPLYPGGS-FDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVN 214
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.033e-19 Identity = 72/214 (33.64%), Postives = 100/214 (46.73%), Query Frame = 2 Query: 197 GADRPLW---FASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADPYTLFV--------LEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAP 799 G +R W ++ + +YL G PGDYG+D GLS DPE + E E+I+ R+AMLGA+G PE+L K+G + WF+ G I G +Y +P + +++ LMG E R N G G+ DP YPG F+PLGL D + + + +KNGRL G+FVQ VTG P Sbjct: 38 GPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYREL------ELIHARWAMLGALGCQTPELLAKSGT--KFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYR----VNGGPAGEGL------------DPLYPGES-FDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGP 226
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.185e-19 Identity = 77/232 (33.19%), Postives = 105/232 (45.26%), Query Frame = 2 Query: 140 SSRKGSFVV-RAASTPPVKQGADRPL-WFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADPYTL--------FVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAP 799 S++KG+ V +++S+ G D W Q G PGDYG+D GLS DPE + E E+I+ R +LGA+G + PE+L I A WF+ G I G NY +P + +++ LMG E R N G G+ DP YPG F+PLGL D + + + +KNGRL M LG+FVQ VTG P Sbjct: 39 STKKGAKAVSKSSSSANQFYGPDATSGWDLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYREL------ELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYR----VNGGPAGEGL------------DPLYPGEA-FDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGP 247 The following BLAST results are available for this feature:
BLAST of EY665151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665151 ID=EY665151; Name=EY665151; organism=Citrus sinensis; type=EST; length=869bpback to top |