EY665151

Overview
NameEY665151
Unique NameEY665151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.490e-18
Identity = 77/226 (34.07%), Postives = 108/226 (47.79%), Query Frame = 2
Query:  197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835
            G DR  +    S +  SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+  +    +WF+ G  I   G  +Y  +           ++  ++ LMG  E  R       G +G+              DP YPG   F+PL L  D ++  +   + +KNGRL M    G+FVQ  VTG  P        A+PVN
Sbjct:   31 GPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGV--KFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAG----GPLGEVT------------DPIYPGGS-FDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVN 231          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.954e-18
Identity = 79/243 (32.51%), Postives = 112/243 (46.09%), Query Frame = 2
Query:  146 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835
            RK +   +  S+     G DR  +    S ++ SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+  + G+  +     W + G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G               DP YPG   F+PLGL +D ++  +   +  KNGRL M    G+F+Q  VTG  P         DPVN
Sbjct:   36 RKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELFARNGV--KFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAG----GPLGVVV------------DPLYPGGS-FDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVN 253          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.267e-16
Identity = 71/244 (29.10%), Postives = 113/244 (46.31%), Query Frame = 2
Query:   89 ETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGVIPPA-GTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGF----EKYLG*SGDPAYPGRPLFNPLGL---------GKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQ 775
            ++++ +L   S      S+     VV AA+  P K          +     +LDGSLPGD+GFDPLGL  DP     F+  KW    E+I+GR+AML  +G      +G+A      T + WF+ G  P A   +++     TL   ++ LMG+ E +R+ D+ +P S    +   +    E +   +G+  YPG   F+PL L           D   ++      +K+ RL ML  L ++ +
Sbjct:   24 KSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDP----AFL--KWYREAELIHGRWAMLAVLGI----FVGQAW-----TGIPWFEAGADPGAVAPFSFG----TLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAMLIFYFE 248          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.278e-16
Identity = 74/249 (29.72%), Postives = 116/249 (46.59%), Query Frame = 2
Query:   95 ARQILGARSAQSPTGSSRKGSFVVRAAST-----PPVKQGADR--PLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGVIPPA-GTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGF----EKYLG*SGDPAYPGRPLFNPLGLG---------KDXKSMKDFXAQGVKNGRLXMLGHLGYFVQ 775
            ++ +L A  A    G++    F V AA+      P V+ G +   P W         LDGSLPGDYGFDPLGL  DP     F+  KW    E+I+GR+AM   +G      +G+A      + + WF+ G  P A   +++     TL   ++ LMG+ E +R+ D+ +P S    +   +    E +   +G+  YPG   F+PL L           D + ++      +K+ RL ML  L ++ +
Sbjct:   23 SQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVRGGGNLVDPEW---------LDGSLPGDYGFDPLGLGKDP----AFL--KWYREAELIHGRWAMAAVLGI----FVGQAW-----SGIPWFEAGADPGAIAPFSFG----TLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIFYFE 243          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.241e-15
Identity = 71/228 (31.14%), Postives = 102/228 (44.74%), Query Frame = 2
Query:  107 LGARSAQSPTGSSRKGS--FVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSD-PEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGS 781
            +G  S  +P+  S +    F   A ++  V   A+   WF  +   ++LDGS PGD+GFDPLGL+  PE    F E       E+ + R+AML   G + PE LG    +      A    G     G    W +  T+  +E   + FAE +R  +  +P           EK         YPG   F+PLG  KD    ++   + +KNGRL ML  +G+ VQ S
Sbjct:   13 VGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAE---WFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKE------SEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAA-LPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTME-KDP-----------EK-------KKYPG-GAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQS 210          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.621e-15
Identity = 74/245 (30.20%), Postives = 109/245 (44.49%), Query Frame = 2
Query:  104 ILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGVIPPA-GTYNYWADPYTLFVLEMALMGFAEHRRFQ----------DWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLG---------KDXKSMKDFXAQGVKNGRLXMLGHLGYFVQ 775
            +LGA      T   R   FVV AA+  P K          +     +LDGSLPGD+GFDPLGL  DP     F+  KW    E+I+GR+AM   +G      +G+A      + + WF+ G  P A   +++     +L   ++ LMG+ E +R+           DWA P S     F  F      +G+  YPG   F+PL L           D + ++      +K+ RL ML  L ++ +
Sbjct:   27 LLGAHVTARVTTPKR---FVVAAAAVAPKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDP----AFL--KWYREAELIHGRWAMAAVLGI----FVGQAW-----SGIPWFEAGADPGAIAPFSFG----SLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANF------TGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIFYFE 243          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.766e-15
Identity = 75/226 (33.19%), Postives = 104/226 (46.02%), Query Frame = 2
Query:  197 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835
            GADR L+    S    SYL G  PGDYG+D  GLS DPE    F + + L   EVI+ R+A+   +G + PE+L + G+   +    WF+ G  I   G  ++  +P          ++  ++ LMG  E          G +G+              DP Y G   F+PLGLG D +   +   + +KNGRL M    G+FVQ  VTG  P         DPVN
Sbjct:   50 GADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADPET---FAKNREL---EVIHCRWAIAVGLGCVFPELLARNGVKFGEGV--WFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAG----GRLGEVV------------DPLYLGGS-FDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVN 250          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.373e-14
Identity = 72/229 (31.44%), Postives = 94/229 (41.05%), Query Frame = 2
Query:  140 SSRKGSFVVRAASTPPVKQGADRPL--------WFASKQSLSYLDGSLPGDYGFDPLGLSD-PEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGVIPPAGTYNY------WADPYTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGS 781
            SS K  F    A+  PV  GA   +        W   +   SYLDGS PGD+GFD LGL + P     + E       E+I+ R+AML   G I PE LG    +         Q     P G   Y      W    T+  +E   + F EH+R                  EK    S    YPG   F+PLG  KD    ++   + +KNGRL +L  +G+ VQ S
Sbjct:   20 SSTKSKF----AAAMPVYVGATNFMSRFSMSADWMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKE------SELIHCRWAMLAVPGIIVPEALGLGNWVKA-------QEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR----------------SMEKD---SEKKKYPG-GAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQS 211          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.897e-14
Identity = 58/173 (33.53%), Postives = 83/173 (47.98%), Query Frame = 2
Query:  347 EVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVTGVAPTXPXXS-XADPVN 835
            EVI+ R+AMLGA+G + PE+L + G+  +     WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G+              DP YPG   F+PLGL  D +++ +   + +KNGRL M    G+FVQ  VTG  P        ADPVN
Sbjct:   89 EVIHSRWAMLGALGCVFPELLARNGV--KFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAG----GPLGEVT------------DPIYPGGS-FDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 242          
BLAST of EY665151 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.381e-13
Identity = 64/192 (33.33%), Postives = 89/192 (46.35%), Query Frame = 2
Query:  239 SYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQDTALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGQAYFLGFEKYLG*SGDPAYPGRPLFNPLGLGKDXKSMKDFXAQGVKNGRLXMLGHLGYFVQGSVT 787
            SYL G  PGDYG+D  GLS    T  F + + L   EVI+ R AM  A+G I PE+L   G    +    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G+              DP YPG   F+ LGL +D ++  +   + +KNGRL M    G+FVQ  V+
Sbjct:   71 SYLTGEFPGDYGWDTAGLSAYPET--FAKNREL---EVIHSRCAMSAALGCIFPELLSVMGQGFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIAR----GPLGEVT------------DPLYPGS--FDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVS 237          
The following BLAST results are available for this feature:
BLAST of EY665151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
CB21_SOYBN3.490e-1834.07Chlorophyll a-b binding protein, chloroplastic (Fr... [more]
CB22_PETSP5.954e-1832.51Chlorophyll a-b binding protein 22L, chloroplastic... [more]
CB4_SPIOL3.267e-1629.10Chlorophyll a-b binding protein CP24, chloroplasti... [more]
CB4A_SOLLC7.278e-1629.72Chlorophyll a-b binding protein CP24 10A, chloropl... [more]
CB121_HORVU1.241e-1531.14Chlorophyll a-b binding protein 1B-21, chloroplast... [more]
CB4B_SOLLC1.621e-1530.20Chlorophyll a-b binding protein CP24 10B, chloropl... [more]
CB48_MAIZE2.766e-1533.19Chlorophyll a-b binding protein 48, chloroplastic ... [more]
CB11_SOLLC1.373e-1431.44Chlorophyll a-b binding protein 6A, chloroplastic ... [more]
CB22_SOYBN8.897e-1433.53Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB2_MALDO3.381e-1333.33Chlorophyll a-b binding protein AB10, chloroplasti... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-F05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665151 ID=EY665151; Name=EY665151; organism=Citrus sinensis; type=EST; length=869bp
ATCGTATTGAAGTAGAGAAACAGAGGAAAAAAGAAAATTAAAAATGGCAA
CCCAAGCTTTGGTTTCATCATCTCTTACATCTTCAGTGGAGACTGCGAGA
CAAATTCTTGGAGCAAGATCAGCTCAATCCCCAACTGGGTCATCAAGAAA
AGGTTCCTTTGTTGTTAGGGCAGCTTCTACTCCTCCTGTTAAGCAAGGAG
CAGACAGACCGTTGTGGTTTGCATCCAAACAAAGCCTTTCATACTTGGAT
GGCAGCCTCCCCGGAGACTATGGATTCGACCCACTTGGTCTCTCAGACCC
TGAAGGCACAGGAGGGTTCATTGAGCCAAAATGGCTGGCCTACGGCGAGG
TCATCAACGGTCGTTATGCCATGTTGGGAGCTGTGGGAGCCATTGCACCG
GAGATTCTTGGCAAGGCAGGCCTCATTCCGCAAGATACTGCCCTGGCCTG
GTTCCAAACCGGTGTGATCCCCCCAGCGGGAACATACAACTACTGGGCAG
ACCCTTACACACTTTTCGTCCTGGAAATGGCACTCATGGGATTTGCCGAG
CACCGGAGATTCCAAGACTGGGCAAATCCAGGATCAATGGGGCAGGCATA
CTTCCTCGGATTCGAGAAATACTTGGGATGATCCGGCGATCCGGCTTACC
CTGGNAGACCTCTATTCAACCCTCTGGGTCTTGGGAAAGATGANAAGTCA
ATGAAGGATTTCNAAGCTCAGGGAGTGAAGAATGGGAGATTGGNCATGTT
GGGGCATCTGGGGTACTTTGTTCAAGGGTCTGTTACAGGAGTGGCCCCTA
CANAACCTATNGNATCCTNGGCTGATCCTGTAAACACATGTTTTGACTAN
CCTCATTTCACTGAAAGGA
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