EH406465

Overview
NameEH406465
Unique NameEH406465
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EH406465 vs. ExPASy Swiss-Prot
Match: H2AZ_PONAB (Histone H2A.Z OS=Pongo abelii GN=H2AFZ PE=2 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 4.831e-38
Identity = 82/108 (75.93%), Postives = 87/108 (80.56%), Query Frame = 3 
Query:  180 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 503
            VSRS RAGLQFPVGR+HR LK               Y+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K  ++
Sbjct:   18 VSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQ 125
[Close]
BLAST of EH406465 vs. ExPASy Swiss-Prot
Match: H2AZ_ONCMY (Histone H2A.Z OS=Oncorhynchus mykiss GN=h2afz PE=1 SV=4)

HSP 1 Score: 157.918 bits (398), Expect = 4.831e-38
Identity = 82/108 (75.93%), Postives = 87/108 (80.56%), Query Frame = 3 
Query:  180 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 503
            VSRS RAGLQFPVGR+HR LK               Y+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K  ++
Sbjct:   18 VSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQ 125
[Close]
BLAST of EH406465 vs. ExPASy Swiss-Prot
Match: H2AZ_MOUSE (Histone H2A.Z OS=Mus musculus GN=H2afz PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 4.831e-38
Identity = 82/108 (75.93%), Postives = 87/108 (80.56%), Query Frame = 3 
Query:  180 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 503
            VSRS RAGLQFPVGR+HR LK               Y+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K  ++
Sbjct:   18 VSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQ 125
[Close]
BLAST of EH406465 vs. ExPASy Swiss-Prot
Match: H2AZ_HUMAN (Histone H2A.Z OS=Homo sapiens GN=H2AFZ PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 4.831e-38
Identity = 82/108 (75.93%), Postives = 87/108 (80.56%), Query Frame = 3 
Query:  180 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 503
            VSRS RAGLQFPVGR+HR LK               Y+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K  ++
Sbjct:   18 VSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQ 125
[Close]
BLAST of EH406465 vs. ExPASy Swiss-Prot
Match: H2AZ_CHICK (Histone H2A.Z OS=Gallus gallus GN=H2AFZ PE=1 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 4.831e-38
Identity = 82/108 (75.93%), Postives = 87/108 (80.56%), Query Frame = 3 
Query:  180 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 503
            VSRS RAGLQFPVGR+HR LK               Y+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K  ++
Sbjct:   18 VSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQ 125
[Close]
BLAST of EH406465 vs. ExPASy Swiss-Prot
Match: H2AZ_BOVIN (Histone H2A.Z OS=Bos taurus GN=H2AFZ PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 4.831e-38
Identity = 82/108 (75.93%), Postives = 87/108 (80.56%), Query Frame = 3 
Query:  180 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 503
            VSRS RAGLQFPVGR+HR LK               Y+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K  ++
Sbjct:   18 VSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQ 125
[Close]
BLAST of EH406465 vs. ExPASy Swiss-Prot
Match: H2AV_STRPU (Histone H2A.V (Fragment) OS=Strongylocentrotus purpuratus GN=H2A.F/Z PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.831e-38
Identity = 82/108 (75.93%), Postives = 87/108 (80.56%), Query Frame = 3 
Query:  180 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 503
            VSRS+RAGLQFPVGR+HR LK               Y+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K   +
Sbjct:   15 VSRSARAGLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGSQ 122
[Close]
BLAST of EH406465 vs. ExPASy Swiss-Prot
Match: H2AV_XENTR (Histone H2A.V OS=Xenopus tropicalis GN=h2afv PE=2 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 6.310e-38
Identity = 82/108 (75.93%), Postives = 87/108 (80.56%), Query Frame = 3 
Query:  180 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 503
            VSRS RAGLQFPVGR+HR LK               Y+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K  ++
Sbjct:   18 VSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQ 125
[Close]
BLAST of EH406465 vs. ExPASy Swiss-Prot
Match: H2AV_XENLA (Histone H2A.V OS=Xenopus laevis GN=h2afv PE=2 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 6.310e-38
Identity = 82/108 (75.93%), Postives = 87/108 (80.56%), Query Frame = 3 
Query:  180 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 503
            VSRS RAGLQFPVGR+HR LK               Y+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K  ++
Sbjct:   18 VSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQ 125
[Close]
BLAST of EH406465 vs. ExPASy Swiss-Prot
Match: H2AV_PAGMA (Histone H2A.V OS=Pagrus major GN=h2afv PE=2 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 6.310e-38
Identity = 82/108 (75.93%), Postives = 87/108 (80.56%), Query Frame = 3 
Query:  180 VSRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 503
            VSRS RAGLQFPVGR+HR LK               Y+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K  ++
Sbjct:   18 VSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQ 125
The following BLAST results are available for this feature:
BLAST of EH406465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
H2AZ_PONAB4.831e-3875.93Histone H2A.Z OS=Pongo abelii GN=H2AFZ PE=2 SV=3[more]
H2AZ_ONCMY4.831e-3875.93Histone H2A.Z OS=Oncorhynchus mykiss GN=h2afz PE=1... [more]
H2AZ_MOUSE4.831e-3875.93Histone H2A.Z OS=Mus musculus GN=H2afz PE=1 SV=2[more]
H2AZ_HUMAN4.831e-3875.93Histone H2A.Z OS=Homo sapiens GN=H2AFZ PE=1 SV=2[more]
H2AZ_CHICK4.831e-3875.93Histone H2A.Z OS=Gallus gallus GN=H2AFZ PE=1 SV=3[more]
H2AZ_BOVIN4.831e-3875.93Histone H2A.Z OS=Bos taurus GN=H2AFZ PE=1 SV=2[more]
H2AV_STRPU4.831e-3875.93Histone H2A.V (Fragment) OS=Strongylocentrotus pur... [more]
H2AV_XENTR6.310e-3875.93Histone H2A.V OS=Xenopus tropicalis GN=h2afv PE=2 ... [more]
H2AV_XENLA6.310e-3875.93Histone H2A.V OS=Xenopus laevis GN=h2afv PE=2 SV=3[more]
H2AV_PAGMA6.310e-3875.93Histone H2A.V OS=Pagrus major GN=h2afv PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2BE07FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406465 ID=EH406465; Name=EH406465; organism=Citrus sinensis; type=EST; length=709bp
TTCTTTCTTCTCCTTTAATTTTCATCTCAGAAAAAATTAAAAATAATTAA
ATAAATAATTAATTAATTTAAAAGAAGCTGTAGCAATTAGGCGGGAAAAT
GTCGGGCAAAGGAGCCAAAGGACTGATAACAGGCAAAACCACCATTAACA
ACAACAAGGATAAGGACAAGAAGAAACCCGTCTCCCGTTCTTCTCGTGCT
GGTCTTCAGTTCCCAGTGGGAAGGGTCCATCGTCTACTAAAGGAAAGGGC
TGCTGCTCACGGAAGGGTTGGCGCAACAGCTGCTGTTTATACAGCAGCCA
TTTTGGAATATCTAACTGCCGAAGTGTTGGAGTTGGCAGGGAATGCTAGC
AAGGATTTGAAGGTCAAACGTATTACTCCAAGGCATTTGCAGCTTGCTAT
CCGAGGAGATGAAGAACTTGACACTCTCATTAAAGGAACCATAGCCGGTG
GAGGAGTTATTCCTCATATCCACAAGTCCCTCATCAATAAATCCTCCAAA
GAGTAGTTCGTGACACCGTCATCCTCTCGGCTTTGTTTATGTGTGTACTT
TTAGCTGTGCTGAAATATCTAAATGAGAAATGATGCCAAAGATGTGTTAA
TGCTAGGAATCTGCATTCTTCAATCCTCATTTCATGCAGCGACGAATTAT
GGTGCTTGTTTTTTCCCATGTTGGTATTGAACTGTTACTGTTTAATTTTT
AAATAATTC
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