EY665149

Overview
NameEY665149
Unique NameEY665149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665149 vs. ExPASy Swiss-Prot
Match: 4CLL2_ARATH (4-coumarate--CoA ligase-like 2 OS=Arabidopsis thaliana GN=4CLL2 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.818e-12
Identity = 58/202 (28.71%), Postives = 92/202 (45.54%), Query Frame = 3
Query:  168 ATHIFKSKLPD--IPISNHLPLHTYCFQDRLSDDPCLIVGLTGKTYSYAETHLICRKTAAGLSNLGIKKGDVIMILLQNCAEFVFSFMGASMIGAVTTTANPFYTSAEILKQFRTSGAKLIITMSQYVDRLPKTDK-DFTVITID---APPENC---------LHFTVLSEADDDQIPESAIEPDDPVALPFSSGTTGLPKG 728
            +T IF SK     +P +  L + ++            +  +TG+  S+ E  L   + A  L  LG++KG+V++IL  N   F    +    +GA+ TTANP  TS EI KQ   S   L  T  + V +L      +  V+ +D    P ++          L   + +E  + ++ +  +  DD  AL +SSGTTG  KG
Sbjct:   30 STSIFYSKREPMALPPNQFLDVTSFIASQPHRGKTVFVDAVTGRRLSFPELWLGVERVAGCLYALGVRKGNVVIILSPNSILFPIVSLSVMSLGAIITTANPINTSDEISKQIGDSRPVLAFTTCKLVSKLAAASNFNLPVVLMDDYHVPSQSYGDRVKLVGRLETMIETEPSESRV-KQRVNQDDTAALLYSSGTTGTSKG 230          
BLAST of EY665149 vs. ExPASy Swiss-Prot
Match: LCFB_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfB PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.519e-11
Identity = 51/163 (31.29%), Postives = 74/163 (45.40%), Query Frame = 3
Query:  300 SYAETHLICRKTAAGLSNLGIKKGDVIMILLQNCAEFVFSFMGASMIGAVTTTANPFYTSAEILKQFRTSGAKLIITMSQYV-------DRLPKTDKDFTVITIDAPPENC-----LHFTVL-------SEADDDQIPESAIEPDDPVALPFSSGTTGLPKGS 731
            +Y E +   ++ A GL   G++KGD + +LL N  +F+ +F GA   G V    NP YT  EI         K I+ +SQ +       + LPK +      T +A PE       +  T         S A  +Q P     PDD   + ++SGTTG PKG+
Sbjct:   28 TYQELNEYIQRFADGLQEAGMEKGDHLALLLGNSPDFIIAFFGALKAGIVVVPINPLYTPTEIGYMLTNGDVKAIVGVSQLLPLYESMHESLPKVELVILCQTGEAEPEAADPEVRMKMTTFAKILRPTSAAKQNQEP----VPDDTAVILYTSGTTGKPKGA 186          
BLAST of EY665149 vs. ExPASy Swiss-Prot
Match: 4CLL8_ORYSJ (Putative 4-coumarate--CoA ligase-like 8 OS=Oryza sativa subsp. japonica GN=4CLL8 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.845e-11
Identity = 52/190 (27.37%), Postives = 82/190 (43.16%), Query Frame = 3
Query:  264 PCLIVGLTGKTYSYAETHLICRKTAAGLSNLGIKKGDVIMILLQNCAEFVFSFMGASMIGAVTTTANPFYTSAEILKQFRTSGAKLIITMSQYVDRLPKTDKDFTVITIDAPPENCLHFTVLSEADDDQ---IPESAIEPDDPVALPFSSGTTGLPKG-----SGADAQEADHXR---GAXSGRREPESY 800
            P  +   TG   S+A    +  + A  L+  G+++G V ++L  N   F    +    +GAV + ANP  T  E+ +Q   +   L +   +   +L     D  ++ ++      L   V +E DDD+   +P + I  DD   L +SSGTTG  KG       A A  A   R   G   G  +P+ Y
Sbjct:   51 PAFVDASTGAALSFAGLRALSLRVARALAAAGLRRGRVALLLSPNSLHFPALSLAVLSLGAVLSAANPLLTPDELARQADDAKPFLALVTGELAPKLRSIAPDVKLVLVEQ-----LLADVAAEVDDDETLDLPAANIGRDDAALLFYSSGTTGRSKGVVSTHGNAIAMAASLERAWGGGGGGGEKPQQY 235          
The following BLAST results are available for this feature:
BLAST of EY665149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
4CLL2_ARATH6.818e-1228.714-coumarate--CoA ligase-like 2 OS=Arabidopsis thal... [more]
LCFB_BACSU1.519e-1131.29Long-chain-fatty-acid--CoA ligase OS=Bacillus subt... [more]
4CLL8_ORYSJ9.845e-1127.37Putative 4-coumarate--CoA ligase-like 8 OS=Oryza s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665149 ID=EY665149; Name=EY665149; organism=Citrus sinensis; type=EST; length=907bp
CTCTAACTTAATTTTCCCTAAACCATAGCCAGCTCCCCCTATTCATCTAA
AAAAATTTCGACAAAACAAAAAAGGCACTCACGATGATATCAATAGCCAC
TAAAAAACCAGAGCTGTCTCTTGATATCTCTTCACCAGCACCACCAGCGC
CGTCCAATGAAAAGATAGCCACCCATATTTTCAAATCAAAGCTTCCCGAT
ATACCCATCTCCAATCATCTCCCTCTCCACACATATTGTTTCCAGGATCG
TTTATCTGACGACCCATGCTTAATCGTTGGCTTAACTGGCAAAACTTACT
CTTATGCCGAAACGCACCTCATCTGTAGAAAAACCGCAGCCGGTTTATCG
AACCTCGGCATCAAAAAGGGCGACGTGATCATGATCCTCCTCCAGAACTG
TGCCGAATTCGTCTTCTCGTTCATGGGAGCTTCCATGATCGGTGCAGTCA
CGACGACGGCCAATCCCTTCTACACTTCAGCTGAAATCTTGAAACAGTTC
AGAACCTCTGGCGCCAAATTGATTATCACAATGTCTCAGTACGTCGACAG
GTTGCCGAAGACGGACAAAGATTTCACAGTGATCACGATCGATGCCCCTC
CGGAGAATTGCCTGCATTTCACAGTGTTATCGGAAGCAGATGATGATCAA
ATCCCAGAAAGTGCCATCGAGCCCGACGATCCTGTGGCGTTGCCCTTCTC
TTCGGGCACCACGGGATTGCCTAAAGGNAGTGGTGCTGACGCACAAGAAG
CTGATCACCANCGTGGCGCANCAAGTGGACGGAGAGAACCCGAATCTTAC
TTGACAACGGAGACGTTGTGCTGGGTGTTTGCCCTTTGNTCACATTATTC
GTTGAAGCGTGCTCTGTGCTCNTNAAAACTGGGGCTGGGGGTCTGTGATG
CAAAATT
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