EY665148

Overview
NameEY665148
Unique NameEY665148
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 3.292e-46
Identity = 87/169 (51.48%), Postives = 124/169 (73.37%), Query Frame = 3
Query:  153 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRM 659
            Y +LFK ++IGD+GVGKSCLLL+F D  +   +  TIGV+F  R +  D K IKLQIWDTAGQE FR+IT SYYRG+ G ++VYD+T +++FN++  WL +   YA+ N+  +L+GNK D+ + + VSYE  + FADE G+ F+ETSAK+A+NVE+AF+  A+ I  ++
Sbjct:    2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEKI 170          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB19_BOVIN (Ras-related protein Rab-19 OS=Bos taurus GN=RAB19 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.616e-46
Identity = 88/196 (44.90%), Postives = 132/196 (67.35%), Query Frame = 3
Query:  138 TMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIG-IPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIR*QPV 722
            T++  +DYLFK++LIGDS VGK+C++  F    Y+E+  +TIGVDF +R +E DGK +K+Q+WDTAGQERFRTIT SYYR AH  I+ YD+T + +F +V  W++EI++Y + N+  +L+GNKCDL   + V +E A   A++ G +  +ETSAK + N+++ F+ MA  +  R  S P      P ++ +   PV
Sbjct:    9 TVDENFDYLFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRALEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKCDLWEKRHVLFEDACILAEKYGLLAVLETSAKESKNIDEVFVLMARELMAR-HSLPLYGEGAPGSLPLESTPV 203          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB15_RAT (Ras-related protein Rab-15 OS=Rattus norvegicus GN=Rab15 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.334e-46
Identity = 83/162 (51.23%), Postives = 119/162 (73.46%), Query Frame = 3
Query:  141 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAF 626
            M  +YD LF+LLLIGDSGVGK+CLL RF D+ +  S+ISTIGVDFK++T+E DG  +++QIWDTAGQER++TIT  YYR A GI +VYD++ + S+ ++ +W++++D YA E V K+L+GNK D    + V  E  +  A E G+ F ETSA +  N++++F
Sbjct:    1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESF 162          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB15_HUMAN (Ras-related protein Rab-15 OS=Homo sapiens GN=RAB15 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.334e-46
Identity = 83/162 (51.23%), Postives = 119/162 (73.46%), Query Frame = 3
Query:  141 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAF 626
            M  +YD LF+LLLIGDSGVGK+CLL RF D+ +  S+ISTIGVDFK++T+E DG  +++QIWDTAGQER++TIT  YYR A GI +VYD++ + S+ ++ +W++++D YA E V K+L+GNK D    + V  E  +  A E G+ F ETSA +  N++++F
Sbjct:    1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESF 162          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 9.579e-46
Identity = 96/215 (44.65%), Postives = 141/215 (65.58%), Query Frame = 3
Query:  132 GTTMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI-----KNRMASQPASNNARP-----PTVQIR*QPVNQKSGCCS 746
            G  +++EY YLFK++LIGDSGVGKS +L RF  + +     STIGV+F  ++++ +GKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+T ++SF+NV +WL E+  +A  ++  ++VGNK DL   + VS +  KA A++ G+ F+ETSA  A NVE+AF  +   +     +  +A++ A+  + P      T+ I     N K  CCS
Sbjct:    2 GGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALAAKEAAAASAPLPSQGKTISIDSAAGNTKRACCS 216          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB15_BOVIN (Ras-related protein Rab-15 OS=Bos taurus GN=RAB15 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.579e-46
Identity = 83/162 (51.23%), Postives = 119/162 (73.46%), Query Frame = 3
Query:  141 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAF 626
            M  +YD LF+LLLIGDSGVGK+CLL RF D+ +  S+ISTIGVDFK++T+E DG  +++QIWDTAGQER++TIT  YYR A GI +VYD++ + S+ ++ +W++++D YA E V K+L+GNK D    + V  E  +  A E G+ F ETSA +  N++++F
Sbjct:    1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAREYGMDFYETSACTNLNIKESF 162          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.579e-46
Identity = 97/213 (45.54%), Postives = 128/213 (60.09%), Query Frame = 3
Query:  132 GTTMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIR*QPVNQKS--------GCCS 746
            G   + EYDYLFKL+LIGDSGVGKS LL RF  + +     STIGV+F  +T + +GK +K QIWDTAGQER+R ITS+YYRGA G +++YDVT   +F N  +WL E+  +   N+  +L+GNKCDL     V  E AKAFA+   + FMETSA  ATNVE AF  +   I   ++ +          +  + + +N K         GCCS
Sbjct:    3 GYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGGGESADLPGKGETINVKEDGSVLKRMGCCS 215          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.251e-45
Identity = 100/211 (47.39%), Postives = 138/211 (65.40%), Query Frame = 3
Query:  144 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPA-SNNARPPTVQIR*QPV---------NQKSGCCS 746
            +++YDYLFK++LIGDSGVGKS LL RF  + +     STIGV+F  R+++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+T   +F NV++WL E+  +A  N+  +LVGNK DL   + V  E A+AF +  G+ F+ETSA  +TNVE+AF  +   I + ++ +   S + RP   + R   V          +K GCCS
Sbjct:    6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRPKIGEGRDVIVIDNAHDDGGKKKGGCCS 216          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.634e-45
Identity = 93/167 (55.69%), Postives = 118/167 (70.66%), Query Frame = 3
Query:  147 NEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI 647
            +EYDYLFK +LIGDSGVGKS LL+RF  + +     STIGV+F  R +  D K IK QIWDTAGQER+R ITS+YYRGA G ++VYD+T Q SF+NV +WL E+  +A  N+  +LVGNK DL   + VS E A+AFA E  + F+ETSA  A+NVE+AF  +   I
Sbjct:    5 DEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEI 171          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.634e-45
Identity = 97/214 (45.33%), Postives = 134/214 (62.62%), Query Frame = 3
Query:  153 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRM-----------------ASQPASNNARPPTVQIR*QPVNQKSGCC 743
            Y YLFK ++IGD+GVGKSCLLL+F D  +   +  TIGV+F  R V  DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++  WL +  +++S N+  +L+GNK DL + + V  E  +AFA E G+ FMETSAK+A NVE+A++  A  I  ++                   Q  +++  P + Q     +   SGCC
Sbjct:    3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYRKIQQGLFDVHNEANGIKIGPQQSITSSVGPCSPQQNVSDIGPDSGCC 216          
The following BLAST results are available for this feature:
BLAST of EY665148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB2A_DICDI3.292e-4651.48Ras-related protein Rab-2A OS=Dictyostelium discoi... [more]
RAB19_BOVIN5.616e-4644.90Ras-related protein Rab-19 OS=Bos taurus GN=RAB19 ... [more]
RAB15_RAT7.334e-4651.23Ras-related protein Rab-15 OS=Rattus norvegicus GN... [more]
RAB15_HUMAN7.334e-4651.23Ras-related protein Rab-15 OS=Homo sapiens GN=RAB1... [more]
RGP2_ORYSJ9.579e-4644.65Ras-related protein RGP2 OS=Oryza sativa subsp. ja... [more]
RAB15_BOVIN9.579e-4651.23Ras-related protein Rab-15 OS=Bos taurus GN=RAB15 ... [more]
RAA1A_ARATH9.579e-4645.54Ras-related protein RABA1a OS=Arabidopsis thaliana... [more]
YPTC6_CHLRE1.251e-4547.39Ras-related protein YPTC6 OS=Chlamydomonas reinhar... [more]
YPT3_SCHPO1.634e-4555.69GTP-binding protein ypt3 OS=Schizosaccharomyces po... [more]
RAB2B_MOUSE1.634e-4545.33Ras-related protein Rab-2B OS=Mus musculus GN=Rab2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-F02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665148 ID=EY665148; Name=EY665148; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGATCTCCATCCATCTCTCCCTACGTCGAAGCAGTTTTCAT
TTGCGATCAATTTTTCTTGCCGGAAATTAAAATTTCTCATCATCTCGTCG
AAGTTTCTGTGATTCATTCGATCCAACGCACGGCACGACCATGAATAACG
AATACGATTATTTGTTTAAGCTTTTGCTCATAGGCGATTCTGGTGTTGGC
AAATCGTGTCTACTTTTGAGGTTTGCTGATGATTCTTATCTGGAAAGCTA
CATTAGCACCATTGGAGTTGACTTTAAAATCCGCACTGTGGAACAAGATG
GCAAAACCATTAAGCTCCAAATTTGGGACACTGCTGGCCAAGAGCGTTTT
AGGACAATAACCAGCAGCTACTATCGTGGGGCTCATGGCATCATTGTTGT
TTATGATGTCACAGATCAAGAGAGCTTCAACAATGTAAAGCAATGGCTGA
ATGAAATTGACCGATATGCAAGTGAAAATGTGAACAAGCTTTTAGTTGGT
AACAAGTGTGATCTCACAGCGAACAAAGTTGTGTCCTATGAGACAGCCAA
GGCATTTGCGGATGAAATTGGGATTCCTTTCATGGAAACAAGTGCTAAAA
GTGCCACCAACGTCGAACAGGCTTTCATGGCCATGGCTGCTTCAATCAAG
AATAGGATGGCAAGCCAACCTGCCTCGAACAATGCTAGGCCGCCAACAGT
GCAGATCCGATGACAGCCTGTCAACCAGAAATCTGGTTGCTGCTCCACTT
AGAAGGGAATTAGTGNTGGNTGAATTTCTGATGTTTATCAATGGNTCTTG
NGGGAATGTACACTAGTTCTCTCTTCTATATGCCTTGATATGAAGGTTNA
TTGGCATGATTTGCTTTNCTTGGCAGNTNNGTCGTACTTTACTAAAGTTT
CCATTCTTTCAATGG
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