EY665148

Overview
NameEY665148
Unique NameEY665148
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB15_MOUSE (Ras-related protein Rab-15 OS=Mus musculus GN=Rab15 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.634e-45
Identity = 82/162 (50.62%), Postives = 119/162 (73.46%), Query Frame = 3
Query:  141 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAF 626
            M  +YD LF+LLLIGDSGVGK+CLL RF D+ +  S+ISTIGVDFK++T++ DG  +++QIWDTAGQER++TIT  YYR A GI +VYD++ + S+ ++ +W++++D YA E V K+L+GNK D    + V  E  +  A E G+ F ETSA +  N++++F
Sbjct:    1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIDVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESF 162          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.634e-45
Identity = 103/213 (48.36%), Postives = 135/213 (63.38%), Query Frame = 3
Query:  132 GTTMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK---NRMASQPASNNARPPT----VQI-R*QPVNQKSGCCS 746
            G   ++EYDYLFK++LIGDSGVGKS LL RF  + +     STIGV+F  R++  D K IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT   +F NV+ WL E+  +   N+  +LVGNK DL     V  E AK+FA++  + FMETSA  ATNVE AF  +   I    ++ A + AS +A  P+    + I +     +K GCCS
Sbjct:    3 GYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASESANVPSKGDKIDIGKDVSAVKKGGCCS 215          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RB11A_RAT (Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1 SV=3)

HSP 1 Score: 182.956 bits (463), Expect = 2.134e-45
Identity = 94/184 (51.09%), Postives = 129/184 (70.11%), Query Frame = 3
Query:  138 TMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNAR 689
            T ++EYDYLFK++LIGDSGVGKS LL RF  + +     STIGV+F  R+++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+    ++ NV++WL E+  +A  N+  +LVGNK DL   + V  + A+AFA++ G+ F+ETSA  +TNVE AF  +   I  R+ SQ   ++ R
Sbjct:    3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRR 185          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RB11A_RABIT (Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2 SV=3)

HSP 1 Score: 182.956 bits (463), Expect = 2.134e-45
Identity = 94/184 (51.09%), Postives = 129/184 (70.11%), Query Frame = 3
Query:  138 TMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNAR 689
            T ++EYDYLFK++LIGDSGVGKS LL RF  + +     STIGV+F  R+++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+    ++ NV++WL E+  +A  N+  +LVGNK DL   + V  + A+AFA++ G+ F+ETSA  +TNVE AF  +   I  R+ SQ   ++ R
Sbjct:    3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRR 185          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RB11A_PONAB (Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3)

HSP 1 Score: 182.956 bits (463), Expect = 2.134e-45
Identity = 94/184 (51.09%), Postives = 129/184 (70.11%), Query Frame = 3
Query:  138 TMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNAR 689
            T ++EYDYLFK++LIGDSGVGKS LL RF  + +     STIGV+F  R+++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+    ++ NV++WL E+  +A  N+  +LVGNK DL   + V  + A+AFA++ G+ F+ETSA  +TNVE AF  +   I  R+ SQ   ++ R
Sbjct:    3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRR 185          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RB11A_PIG (Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3)

HSP 1 Score: 182.956 bits (463), Expect = 2.134e-45
Identity = 94/184 (51.09%), Postives = 129/184 (70.11%), Query Frame = 3
Query:  138 TMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNAR 689
            T ++EYDYLFK++LIGDSGVGKS LL RF  + +     STIGV+F  R+++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+    ++ NV++WL E+  +A  N+  +LVGNK DL   + V  + A+AFA++ G+ F+ETSA  +TNVE AF  +   I  R+ SQ   ++ R
Sbjct:    3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRR 185          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RB11A_MOUSE (Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3)

HSP 1 Score: 182.956 bits (463), Expect = 2.134e-45
Identity = 94/184 (51.09%), Postives = 129/184 (70.11%), Query Frame = 3
Query:  138 TMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNAR 689
            T ++EYDYLFK++LIGDSGVGKS LL RF  + +     STIGV+F  R+++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+    ++ NV++WL E+  +A  N+  +LVGNK DL   + V  + A+AFA++ G+ F+ETSA  +TNVE AF  +   I  R+ SQ   ++ R
Sbjct:    3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRR 185          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3)

HSP 1 Score: 182.956 bits (463), Expect = 2.134e-45
Identity = 94/184 (51.09%), Postives = 129/184 (70.11%), Query Frame = 3
Query:  138 TMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNAR 689
            T ++EYDYLFK++LIGDSGVGKS LL RF  + +     STIGV+F  R+++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+    ++ NV++WL E+  +A  N+  +LVGNK DL   + V  + A+AFA++ G+ F+ETSA  +TNVE AF  +   I  R+ SQ   ++ R
Sbjct:    3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRR 185          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3)

HSP 1 Score: 182.956 bits (463), Expect = 2.134e-45
Identity = 94/184 (51.09%), Postives = 129/184 (70.11%), Query Frame = 3
Query:  138 TMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNAR 689
            T ++EYDYLFK++LIGDSGVGKS LL RF  + +     STIGV+F  R+++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+    ++ NV++WL E+  +A  N+  +LVGNK DL   + V  + A+AFA++ G+ F+ETSA  +TNVE AF  +   I  R+ SQ   ++ R
Sbjct:    3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRR 185          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.134e-45
Identity = 94/211 (44.55%), Postives = 136/211 (64.45%), Query Frame = 3
Query:  144 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIR---------*QPVNQKSGCCST 749
            + EYDYLFK++LIGDSGVGKS LL RF  + +     STIGV+F  RT++ +G+T+K QIWDTAGQER+R ITS+YYRGA G ++VYDVT   +F NV +WL E+  +A  N+  +L+GNK DL   + V+ E A+++A++ G+ F+ETSA  A NVE+AF  + + +   ++ +  S++       I+             N K  CCS+
Sbjct:    6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTANANIKEGQTIDVAATSESNAKKPCCSS 216          
The following BLAST results are available for this feature:
BLAST of EY665148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB15_MOUSE1.634e-4550.62Ras-related protein Rab-15 OS=Mus musculus GN=Rab1... [more]
RAA1C_ARATH1.634e-4548.36Ras-related protein RABA1c OS=Arabidopsis thaliana... [more]
RB11A_RAT2.134e-4551.09Ras-related protein Rab-11A OS=Rattus norvegicus G... [more]
RB11A_RABIT2.134e-4551.09Ras-related protein Rab-11A OS=Oryctolagus cunicul... [more]
RB11A_PONAB2.134e-4551.09Ras-related protein Rab-11A OS=Pongo abelii GN=RAB... [more]
RB11A_PIG2.134e-4551.09Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11... [more]
RB11A_MOUSE2.134e-4551.09Ras-related protein Rab-11A OS=Mus musculus GN=Rab... [more]
RB11A_HUMAN2.134e-4551.09Ras-related protein Rab-11A OS=Homo sapiens GN=RAB... [more]
RB11A_CANFA2.134e-4551.09Ras-related protein Rab-11A OS=Canis familiaris GN... [more]
RAA2A_ARATH2.134e-4544.55Ras-related protein RABA2a OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-F02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665148 ID=EY665148; Name=EY665148; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGATCTCCATCCATCTCTCCCTACGTCGAAGCAGTTTTCAT
TTGCGATCAATTTTTCTTGCCGGAAATTAAAATTTCTCATCATCTCGTCG
AAGTTTCTGTGATTCATTCGATCCAACGCACGGCACGACCATGAATAACG
AATACGATTATTTGTTTAAGCTTTTGCTCATAGGCGATTCTGGTGTTGGC
AAATCGTGTCTACTTTTGAGGTTTGCTGATGATTCTTATCTGGAAAGCTA
CATTAGCACCATTGGAGTTGACTTTAAAATCCGCACTGTGGAACAAGATG
GCAAAACCATTAAGCTCCAAATTTGGGACACTGCTGGCCAAGAGCGTTTT
AGGACAATAACCAGCAGCTACTATCGTGGGGCTCATGGCATCATTGTTGT
TTATGATGTCACAGATCAAGAGAGCTTCAACAATGTAAAGCAATGGCTGA
ATGAAATTGACCGATATGCAAGTGAAAATGTGAACAAGCTTTTAGTTGGT
AACAAGTGTGATCTCACAGCGAACAAAGTTGTGTCCTATGAGACAGCCAA
GGCATTTGCGGATGAAATTGGGATTCCTTTCATGGAAACAAGTGCTAAAA
GTGCCACCAACGTCGAACAGGCTTTCATGGCCATGGCTGCTTCAATCAAG
AATAGGATGGCAAGCCAACCTGCCTCGAACAATGCTAGGCCGCCAACAGT
GCAGATCCGATGACAGCCTGTCAACCAGAAATCTGGTTGCTGCTCCACTT
AGAAGGGAATTAGTGNTGGNTGAATTTCTGATGTTTATCAATGGNTCTTG
NGGGAATGTACACTAGTTCTCTCTTCTATATGCCTTGATATGAAGGTTNA
TTGGCATGATTTGCTTTNCTTGGCAGNTNNGTCGTACTTTACTAAAGTTT
CCATTCTTTCAATGG
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