EY665148

Overview
NameEY665148
Unique NameEY665148
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB2A_CHICK (Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.059e-44
Identity = 88/169 (52.07%), Postives = 123/169 (72.78%), Query Frame = 3
Query:  153 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRM 659
            Y YLFK ++IGD+GVGKSCLLL+F D  +   +  TIGV+F  R +  DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +++FN++  WL +  ++++ N+  +L+GNK DL + + V  E  +AFA E G+ FMETSAK+A+NVE+AF+  A  I  ++
Sbjct:    3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKI 171          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB2A_CANFA (Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.059e-44
Identity = 88/169 (52.07%), Postives = 123/169 (72.78%), Query Frame = 3
Query:  153 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRM 659
            Y YLFK ++IGD+GVGKSCLLL+F D  +   +  TIGV+F  R +  DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +++FN++  WL +  ++++ N+  +L+GNK DL + + V  E  +AFA E G+ FMETSAK+A+NVE+AF+  A  I  ++
Sbjct:    3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKI 171          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.383e-44
Identity = 87/182 (47.80%), Postives = 126/182 (69.23%), Query Frame = 3
Query:  150 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPP 695
            +YD+LFK++LIG++GVGK+CL+ RF    +     +TIGVDF I+TVE +G+ +KLQIWDTAGQERFR+IT SYYR A+ +I+ YD+T +ESF  + +WL EI++YAS  V  +LVGNK DL   + VS + A+ F++   + ++ETSAK + NVE+ F+ +A  + +        NN   P
Sbjct:    5 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSP 186          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 1.383e-44
Identity = 87/182 (47.80%), Postives = 126/182 (69.23%), Query Frame = 3
Query:  150 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPP 695
            +YD+LFK++LIG++GVGK+CL+ RF    +     +TIGVDF I+TVE +G+ +KLQIWDTAGQERFR+IT SYYR A+ +I+ YD+T +ESF  + +WL EI++YAS  V  +LVGNK DL   + VS + A+ F++   + ++ETSAK + NVE+ F+ +A  + +        NN   P
Sbjct:    5 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSP 186          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.383e-44
Identity = 87/182 (47.80%), Postives = 126/182 (69.23%), Query Frame = 3
Query:  150 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPP 695
            +YD+LFK++LIG++GVGK+CL+ RF    +     +TIGVDF I+TVE +G+ +KLQIWDTAGQERFR+IT SYYR A+ +I+ YD+T +ESF  + +WL EI++YAS  V  +LVGNK DL   + VS + A+ F++   + ++ETSAK + NVE+ F+ +A  + +        NN   P
Sbjct:    5 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSP 186          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB19_HUMAN (Ras-related protein Rab-19 OS=Homo sapiens GN=RAB19 PE=2 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 1.383e-44
Identity = 81/169 (47.93%), Postives = 121/169 (71.60%), Query Frame = 3
Query:  144 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIG-IPFMETSAKSATNVEQAFMAMAASI 647
            +  +DYLFK++LIGDS VGK+C++  F    Y E+  +TIGVDF +R+++ DGK +K+Q+WDTAGQERFRTIT SYYR AH  I+ YD+T + +F ++  W++EI++Y + NV  +L+GNKCDL   + V +E A   A++ G +  +ETSAK + N+E+ F+ MA  +
Sbjct:   11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKEL 179          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.383e-44
Identity = 99/213 (46.48%), Postives = 134/213 (62.91%), Query Frame = 3
Query:  132 GTTMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI-----KNRMASQPASNNARPPTVQIR*Q---PVNQKSGCCS 746
            G  + ++YDYLFK++LIGDSGVGKS LL RF  + +     STIGV+F  RT++ DGK +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT + +F NV +WL E+  +   N+  +LVGNK DL     V  E  K++A++  + FMETSA  ATNVE AF  +   I     K ++ +    N + P   +I  +      +K GCCS
Sbjct:    3 GYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNASVPKGEKIEVKNDVSALKKLGCCS 215          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RB11B_RAT (Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2 SV=4)

HSP 1 Score: 179.874 bits (455), Expect = 1.806e-44
Identity = 90/183 (49.18%), Postives = 128/183 (69.95%), Query Frame = 3
Query:  138 TMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNA 686
            T ++EYDYLFK++LIGDSGVGKS LL RF  + +     STIGV+F  R+++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+    ++ NV++WL E+  +A  N+  +LVGNK DL   + V  + A+AFA++  + F+ETSA  +TNVE+AF  +   I   ++ +  ++ A
Sbjct:    3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RB11B_MOUSE (Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3)

HSP 1 Score: 179.874 bits (455), Expect = 1.806e-44
Identity = 90/183 (49.18%), Postives = 128/183 (69.95%), Query Frame = 3
Query:  138 TMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNA 686
            T ++EYDYLFK++LIGDSGVGKS LL RF  + +     STIGV+F  R+++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+    ++ NV++WL E+  +A  N+  +LVGNK DL   + V  + A+AFA++  + F+ETSA  +TNVE+AF  +   I   ++ +  ++ A
Sbjct:    3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RB11B_HUMAN (Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4)

HSP 1 Score: 179.874 bits (455), Expect = 1.806e-44
Identity = 90/183 (49.18%), Postives = 128/183 (69.95%), Query Frame = 3
Query:  138 TMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNA 686
            T ++EYDYLFK++LIGDSGVGKS LL RF  + +     STIGV+F  R+++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+    ++ NV++WL E+  +A  N+  +LVGNK DL   + V  + A+AFA++  + F+ETSA  +TNVE+AF  +   I   ++ +  ++ A
Sbjct:    3 TRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185          
The following BLAST results are available for this feature:
BLAST of EY665148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB2A_CHICK1.059e-4452.07Ras-related protein Rab-2A OS=Gallus gallus GN=RAB... [more]
RAB2A_CANFA1.059e-4452.07Ras-related protein Rab-2A OS=Canis familiaris GN=... [more]
RAB30_MOUSE1.383e-4447.80Ras-related protein Rab-30 OS=Mus musculus GN=Rab3... [more]
RAB30_HUMAN1.383e-4447.80Ras-related protein Rab-30 OS=Homo sapiens GN=RAB3... [more]
RAB30_BOVIN1.383e-4447.80Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 ... [more]
RAB19_HUMAN1.383e-4447.93Ras-related protein Rab-19 OS=Homo sapiens GN=RAB1... [more]
RAA1B_ARATH1.383e-4446.48Ras-related protein RABA1b OS=Arabidopsis thaliana... [more]
RB11B_RAT1.806e-4449.18Ras-related protein Rab-11B OS=Rattus norvegicus G... [more]
RB11B_MOUSE1.806e-4449.18Ras-related protein Rab-11B OS=Mus musculus GN=Rab... [more]
RB11B_HUMAN1.806e-4449.18Ras-related protein Rab-11B OS=Homo sapiens GN=RAB... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-F02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665148 ID=EY665148; Name=EY665148; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGATCTCCATCCATCTCTCCCTACGTCGAAGCAGTTTTCAT
TTGCGATCAATTTTTCTTGCCGGAAATTAAAATTTCTCATCATCTCGTCG
AAGTTTCTGTGATTCATTCGATCCAACGCACGGCACGACCATGAATAACG
AATACGATTATTTGTTTAAGCTTTTGCTCATAGGCGATTCTGGTGTTGGC
AAATCGTGTCTACTTTTGAGGTTTGCTGATGATTCTTATCTGGAAAGCTA
CATTAGCACCATTGGAGTTGACTTTAAAATCCGCACTGTGGAACAAGATG
GCAAAACCATTAAGCTCCAAATTTGGGACACTGCTGGCCAAGAGCGTTTT
AGGACAATAACCAGCAGCTACTATCGTGGGGCTCATGGCATCATTGTTGT
TTATGATGTCACAGATCAAGAGAGCTTCAACAATGTAAAGCAATGGCTGA
ATGAAATTGACCGATATGCAAGTGAAAATGTGAACAAGCTTTTAGTTGGT
AACAAGTGTGATCTCACAGCGAACAAAGTTGTGTCCTATGAGACAGCCAA
GGCATTTGCGGATGAAATTGGGATTCCTTTCATGGAAACAAGTGCTAAAA
GTGCCACCAACGTCGAACAGGCTTTCATGGCCATGGCTGCTTCAATCAAG
AATAGGATGGCAAGCCAACCTGCCTCGAACAATGCTAGGCCGCCAACAGT
GCAGATCCGATGACAGCCTGTCAACCAGAAATCTGGTTGCTGCTCCACTT
AGAAGGGAATTAGTGNTGGNTGAATTTCTGATGTTTATCAATGGNTCTTG
NGGGAATGTACACTAGTTCTCTCTTCTATATGCCTTGATATGAAGGTTNA
TTGGCATGATTTGCTTTNCTTGGCAGNTNNGTCGTACTTTACTAAAGTTT
CCATTCTTTCAATGG
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