EY665148

Overview
NameEY665148
Unique NameEY665148
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.572e-64
Identity = 118/197 (59.90%), Postives = 153/197 (77.66%), Query Frame = 3
Query:  153 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIR*QPVNQKSGCC 743
            YD+L KLLLIGDSGVGKSCLLLRF+D S+  S+I+TIG+DFKIRT+E +GK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD++SF +++ W+  I+++AS++VNK+L+GNKCD+T  KVV     K+ ADE GI F+ETSAK++ NVE+AF+ +A  IK RM   P       P   I   P N+K+ CC
Sbjct:   12 YDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKRMIDTP-----NDPDHTICITPNNKKNTCC 203          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.681e-64
Identity = 112/174 (64.37%), Postives = 147/174 (84.48%), Query Frame = 3
Query:  129 HGTTMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK 650
            HG+  + EYD L K+L+IGDSGVGKSC+LLRFAD+ + +SYISTIGVDF IRT+E DGK IKLQIWDTAGQERF+TIT+SYYRGAHG+I+VYD+T  +SFN++K+WL ++DR+AS +V KL+VGNKCDL + + V ++ AK FADE+ IP METSAK +T +++AF+ +A+ IK
Sbjct:   22 HGSESHPEYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKCDLNSKRAVDFKIAKKFADELNIPIMETSAKESTAIDEAFIKLASDIK 195          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.964e-63
Identity = 122/205 (59.51%), Postives = 154/205 (75.12%), Query Frame = 3
Query:  150 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPP-TVQIR*QPVNQ---KSGCCST 749
            +YDYL KLLLIGDSGVGKSCLLLRF+D S+  S+I+TIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+  I+++AS+NVNK+LVGNK D+  +K  V     +A ADE GI F ETSAK+  NVE+ F ++A  IK R+A       A+P  T++   Q  NQ   KS CC +
Sbjct:   11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEAQPSITIKPADQSGNQAAAKSACCGS 215          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.509e-62
Identity = 120/208 (57.69%), Postives = 152/208 (73.08%), Query Frame = 3
Query:  150 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIR*Q-------PVNQKSGCCST 749
            +YDYL KLLLIGDSGVGKSCLLLRF+D S+  S+I+TIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+  I+++AS+NVNK+LVGNK D+  +K  V     +A ADE GI F ETSAK+  NVE+ F ++   IK R++     + A P T++I             QKS CC T
Sbjct:   11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSD--TDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 6.180e-61
Identity = 111/180 (61.67%), Postives = 145/180 (80.56%), Query Frame = 3
Query:  153 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRM--ASQPASNNA 686
            YDYL KLLLIGDSGVGKSCLLLRF++DS+  S+I+TIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI+++YDVTD++SF+NV+ W + ++++ASENV K+L+GNKCD    + VS+E  +A ADE+G+ F+E SAK+  NV++AF  +A  IK +   A    SN A
Sbjct:    6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQA 185          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 3.067e-60
Identity = 119/206 (57.77%), Postives = 149/206 (72.33%), Query Frame = 3
Query:  150 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIR*QPVNQKSGCCST*KGIS 764
            +YD L KLLL+GDSGVGKSCLLLRF DD +  S+I+TIG+DFKI+ V+ DGK +KLQIWDTAGQERFRTITS+YYRGA GII+VYD+TD+ SFNNV+ W+  I+++AS+NVNK+LVGNK DL  +K VVS    +A ADE G  F ETSAK   +VE+AF+A+A  +  RM  + A+            QPV   SG  S  +G S
Sbjct:    9 DYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGNKLDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARMEGEHANQQLLQQQQLSAAQPVRLTSGSPSPAQGKS 214          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.683e-58
Identity = 104/182 (57.14%), Postives = 144/182 (79.12%), Query Frame = 3
Query:  141 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNA 686
            M   YDYLFKLLLIGDSGVGK+CLL RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+  I+ +AS +V ++++GNKCD+   + VS E  +  A + GI F+ETSAKS+TNVE+AF  +A  I  ++  +   +N+
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNS 182          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.683e-58
Identity = 104/182 (57.14%), Postives = 144/182 (79.12%), Query Frame = 3
Query:  141 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNA 686
            M   YDYLFKLLLIGDSGVGK+CLL RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+  I+ +AS +V ++++GNKCD+   + VS E  +  A + GI F+ETSAKS+TNVE+AF  +A  I  ++  +   +N+
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNS 182          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB8B_MOUSE (Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.683e-58
Identity = 104/182 (57.14%), Postives = 144/182 (79.12%), Query Frame = 3
Query:  141 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNA 686
            M   YDYLFKLLLIGDSGVGK+CLL RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+  I+ +AS +V ++++GNKCD+   + VS E  +  A + GI F+ETSAKS+TNVE+AF  +A  I  ++  +   +N+
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNS 182          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.683e-58
Identity = 106/190 (55.79%), Postives = 144/190 (75.79%), Query Frame = 3
Query:  141 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIR 710
            M   YD+LFKLLLIGDSGVGK+CL++RFA+D++  +YISTIG+DF+IRTV+ +GK IKLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+  I   AS  V +LL+GNKCD+ A + V  E A   A E GI F ETSAKS+ NV++AF ++A  I  +   +   NN +PP+  ++
Sbjct:    1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLKNNNKPPSTDLK 190          
The following BLAST results are available for this feature:
BLAST of EY665148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB8B_DICDI1.572e-6459.90Ras-related protein Rab-8B OS=Dictyostelium discoi... [more]
RAB1C_DICDI2.681e-6464.37Ras-related protein Rab-1C OS=Dictyostelium discoi... [more]
RB1BV_BETVU2.964e-6359.51Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB... [more]
ARA3_ARATH2.509e-6257.69Ras-related protein ARA-3 OS=Arabidopsis thaliana ... [more]
YPT2_SCHPO6.180e-6161.67GTP-binding protein ypt2 OS=Schizosaccharomyces po... [more]
YPTV2_VOLCA3.067e-6057.77GTP-binding protein yptV2 OS=Volvox carteri GN=YPT... [more]
RAB8B_RAT1.683e-5857.14Ras-related protein Rab-8B OS=Rattus norvegicus GN... [more]
RAB8B_PONAB1.683e-5857.14Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8... [more]
RAB8B_MOUSE1.683e-5857.14Ras-related protein Rab-8B OS=Mus musculus GN=Rab8... [more]
RAB13_BOVIN1.683e-5855.79Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-F02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665148 ID=EY665148; Name=EY665148; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGATCTCCATCCATCTCTCCCTACGTCGAAGCAGTTTTCAT
TTGCGATCAATTTTTCTTGCCGGAAATTAAAATTTCTCATCATCTCGTCG
AAGTTTCTGTGATTCATTCGATCCAACGCACGGCACGACCATGAATAACG
AATACGATTATTTGTTTAAGCTTTTGCTCATAGGCGATTCTGGTGTTGGC
AAATCGTGTCTACTTTTGAGGTTTGCTGATGATTCTTATCTGGAAAGCTA
CATTAGCACCATTGGAGTTGACTTTAAAATCCGCACTGTGGAACAAGATG
GCAAAACCATTAAGCTCCAAATTTGGGACACTGCTGGCCAAGAGCGTTTT
AGGACAATAACCAGCAGCTACTATCGTGGGGCTCATGGCATCATTGTTGT
TTATGATGTCACAGATCAAGAGAGCTTCAACAATGTAAAGCAATGGCTGA
ATGAAATTGACCGATATGCAAGTGAAAATGTGAACAAGCTTTTAGTTGGT
AACAAGTGTGATCTCACAGCGAACAAAGTTGTGTCCTATGAGACAGCCAA
GGCATTTGCGGATGAAATTGGGATTCCTTTCATGGAAACAAGTGCTAAAA
GTGCCACCAACGTCGAACAGGCTTTCATGGCCATGGCTGCTTCAATCAAG
AATAGGATGGCAAGCCAACCTGCCTCGAACAATGCTAGGCCGCCAACAGT
GCAGATCCGATGACAGCCTGTCAACCAGAAATCTGGTTGCTGCTCCACTT
AGAAGGGAATTAGTGNTGGNTGAATTTCTGATGTTTATCAATGGNTCTTG
NGGGAATGTACACTAGTTCTCTCTTCTATATGCCTTGATATGAAGGTTNA
TTGGCATGATTTGCTTTNCTTGGCAGNTNNGTCGTACTTTACTAAAGTTT
CCATTCTTTCAATGG
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