EY665148

Overview
NameEY665148
Unique NameEY665148
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RASK_MONDO (GTPase KRas OS=Monodelphis domestica GN=KRAS PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.260e-21
Identity = 58/163 (35.58%), Postives = 94/163 (57.67%), Query Frame = 3
Query:  165 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK 650
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G + V+ + + +SF ++  +  +I R   SE+V  +LVGNKCDL  ++ V  + A+  A   GIPF+ETSAK+    + AF  +   I+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL-PSRTVDTKQAQDLARSYGIPFIETSAKTRQGGDDAFYTLVREIR 164          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: GSP1_YEAST (GTP-binding nuclear protein GSP1/CNR1 OS=Saccharomyces cerevisiae GN=GSP1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.645e-21
Identity = 64/189 (33.86%), Postives = 99/189 (52.38%), Query Frame = 3
Query:  165 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK-NRMASQPASNNARPPTVQIR*QPVNQ 728
            FKL+L+GD G GK+  + R     + + YI+TIGV+    +   +   IK  +WDTAGQE+F  +   YY  A   I+++DVT + ++ NV  W  ++ R   EN+  +L GNK D+   KV +      F  +  + + + SAKS  N E+ F+ +A  +  N      AS    PP VQ+  Q + Q
Sbjct:   13 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVR-VCENIPIVLCGNKVDVKERKVKA--KTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVASPALAPPEVQVDEQLMQQ 198          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RBL2A_PONAB (Rab-like protein 2A OS=Pongo abelii GN=RABL2A PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 57/153 (37.25%), Postives = 84/153 (54.90%), Query Frame = 3
Query:  168 KLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAF 626
            K++ +GDS VGKS L+ RF  D +    +ST  +     T   DGKTI +  WDTAGQERF+++ +SYY  AH  I+V+DV  + ++ N+  W  E+  +  E +  L+V NK D   N     + +  FA +  +P    SA   TNV + F
Sbjct:   23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYKNLSAWYTELREFRPE-IPCLVVANKIDADINVT---QKSFNFAKKFSLPLYFVSAADGTNVVKLF 171          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAP1B_XENTR (Ras-related protein Rap-1b OS=Xenopus tropicalis GN=rap1b PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 59/166 (35.54%), Postives = 94/166 (56.63%), Query Frame = 3
Query:  165 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADE-IGIPFMETSAKSATNVEQAFMAMAASIKNR 656
            +KL+++G  GVGKS L ++F    ++E Y  TI   ++ + VE DG+   L+I DTAG E+F  +   Y +   G  +VY +T Q +FN+++    +I R   +++V  +LVGNKCDL   +VV  E  +  A +     F+E+SAKS  NV + F  +   I  +
Sbjct:    4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRK 168          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAP1B_XENLA (Ras-related protein Rap-1b OS=Xenopus laevis GN=rap1b PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 59/166 (35.54%), Postives = 94/166 (56.63%), Query Frame = 3
Query:  165 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADE-IGIPFMETSAKSATNVEQAFMAMAASIKNR 656
            +KL+++G  GVGKS L ++F    ++E Y  TI   ++ + VE DG+   L+I DTAG E+F  +   Y +   G  +VY +T Q +FN+++    +I R   +++V  +LVGNKCDL   +VV  E  +  A +     F+E+SAKS  NV + F  +   I  +
Sbjct:    4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRK 168          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAP1B_DANRE (Ras-related protein Rap-1b OS=Danio rerio GN=rap1b PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 59/166 (35.54%), Postives = 94/166 (56.63%), Query Frame = 3
Query:  165 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADE-IGIPFMETSAKSATNVEQAFMAMAASIKNR 656
            +KL+++G  GVGKS L ++F    ++E Y  TI   ++ + VE DG+   L+I DTAG E+F  +   Y +   G  +VY +T Q +FN+++    +I R   +++V  +LVGNKCDL   +VV  E  +  A +     F+E+SAKS  NV + F  +   I  +
Sbjct:    4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNSCAFLESSAKSKINVNEIFYDLVRQINRK 168          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB24_HUMAN (Ras-related protein Rab-24 OS=Homo sapiens GN=RAB24 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.806e-21
Identity = 58/162 (35.80%), Postives = 87/162 (53.70%), Query Frame = 3
Query:  168 KLLLIGDSGVGKSCLLLRFADDSYLES-YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL----TANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMA 638
            K++++G   VGK+ L+ R+  D +L   Y +TIG  F  + +    +T+ L IWDTAG ER+  ++  YYRGA   IV YD+TD  SF   K W+ E+ R   E     L G K DL       + V +   + +AD I     ETS+K+  +V++ F  +A
Sbjct:    9 KVVMLGKEYVGKTSLVERYVHDRFLVGPYQNTIGAAFVAKVMSVGDRTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKEL-RSLEEGCQIYLCGTKSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDELFQKVA 169          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: GSP1_CANGA (GTP-binding nuclear protein GSP1/Ran OS=Candida glabrata GN=GSP1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.806e-21
Identity = 64/189 (33.86%), Postives = 98/189 (51.85%), Query Frame = 3
Query:  165 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK-NRMASQPASNNARPPTVQIR*QPVNQ 728
            FKL+L+GD G GK+  + R     + + YI+TIGV+        +   IK  +WDTAGQE+F  +   YY  A   I+++DVT + ++ NV  W  ++ R   EN+  +L GNK D+   KV +      F  +  + + + SAKS  N E+ F+ +A  +  N      AS    PP VQ+  Q + Q
Sbjct:    8 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLAFHTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCGIIMFDVTSRITYKNVPNWHRDLVR-VCENIPIVLCGNKVDVKERKVKA--KTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVASPALAPPEVQVDEQLMQQ 193          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAP1B_CYPCA (Ras-related protein Rap-1b OS=Cyprinus carpio GN=rap1b PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.665e-21
Identity = 59/166 (35.54%), Postives = 94/166 (56.63%), Query Frame = 3
Query:  165 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADE-IGIPFMETSAKSATNVEQAFMAMAASIKNR 656
            +KL+++G  GVGKS L ++F    ++E Y  TI   ++ + VE DG+   L+I DTAG E+F  +   Y +   G  +VY +T Q +FN+++    +I R   +++V  +LVGNKCDL   +VV  E  +  A +     F+E+SAKS  NV + F  +   I  +
Sbjct:    4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPIILVGNKCDLEDERVVGKEQGQNLARQWNSCAFLESSAKSKINVNEIFYDLVRQINRK 168          
BLAST of EY665148 vs. ExPASy Swiss-Prot
Match: RAB24_DICDI (Ras-related protein Rab-24 OS=Dictyostelium discoideum GN=rab24 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.665e-21
Identity = 64/196 (32.65%), Postives = 99/196 (50.51%), Query Frame = 3
Query:  168 KLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTAN---KVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPP-TVQIR*QPVNQKSGCC 743
            K++L+G + VGK+C++ R+    + +++ +TIG  F  + V      + L IWDTAG ER++ +  SYYR A+  IV YD+T++ES+  V  W  E+ +   E +   +VG K DL      K V  E  K  A        ETS+++  NV   F  +A     R  +     N+ P   V +  Q   +K GCC
Sbjct:    9 KVVLLGYASVGKTCIVTRYTSGQFGDTH-TTIGGAFSSKRVVVGETEVLLGIWDTAGTERYQAVNVSYYRRANAAIVCYDLTNRESWEKVTFWAEELTQNEPE-IEIYIVGTKLDLIQQGDIKAVPEEEVKQTARRYKAHIFETSSRTGENVSLLFQTIAEDFCKRTNNGTNPVNSNPSNVVNVNTQTQKKKGGCC 202          
The following BLAST results are available for this feature:
BLAST of EY665148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RASK_MONDO1.260e-2135.58GTPase KRas OS=Monodelphis domestica GN=KRAS PE=1 ... [more]
GSP1_YEAST1.645e-2133.86GTP-binding nuclear protein GSP1/CNR1 OS=Saccharom... [more]
RBL2A_PONAB2.149e-2137.25Rab-like protein 2A OS=Pongo abelii GN=RABL2A PE=2... [more]
RAP1B_XENTR2.149e-2135.54Ras-related protein Rap-1b OS=Xenopus tropicalis G... [more]
RAP1B_XENLA2.149e-2135.54Ras-related protein Rap-1b OS=Xenopus laevis GN=ra... [more]
RAP1B_DANRE2.149e-2135.54Ras-related protein Rap-1b OS=Danio rerio GN=rap1b... [more]
RAB24_HUMAN2.806e-2135.80Ras-related protein Rab-24 OS=Homo sapiens GN=RAB2... [more]
GSP1_CANGA2.806e-2133.86GTP-binding nuclear protein GSP1/Ran OS=Candida gl... [more]
RAP1B_CYPCA3.665e-2135.54Ras-related protein Rap-1b OS=Cyprinus carpio GN=r... [more]
RAB24_DICDI3.665e-2132.65Ras-related protein Rab-24 OS=Dictyostelium discoi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-F02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665148 ID=EY665148; Name=EY665148; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGATCTCCATCCATCTCTCCCTACGTCGAAGCAGTTTTCAT
TTGCGATCAATTTTTCTTGCCGGAAATTAAAATTTCTCATCATCTCGTCG
AAGTTTCTGTGATTCATTCGATCCAACGCACGGCACGACCATGAATAACG
AATACGATTATTTGTTTAAGCTTTTGCTCATAGGCGATTCTGGTGTTGGC
AAATCGTGTCTACTTTTGAGGTTTGCTGATGATTCTTATCTGGAAAGCTA
CATTAGCACCATTGGAGTTGACTTTAAAATCCGCACTGTGGAACAAGATG
GCAAAACCATTAAGCTCCAAATTTGGGACACTGCTGGCCAAGAGCGTTTT
AGGACAATAACCAGCAGCTACTATCGTGGGGCTCATGGCATCATTGTTGT
TTATGATGTCACAGATCAAGAGAGCTTCAACAATGTAAAGCAATGGCTGA
ATGAAATTGACCGATATGCAAGTGAAAATGTGAACAAGCTTTTAGTTGGT
AACAAGTGTGATCTCACAGCGAACAAAGTTGTGTCCTATGAGACAGCCAA
GGCATTTGCGGATGAAATTGGGATTCCTTTCATGGAAACAAGTGCTAAAA
GTGCCACCAACGTCGAACAGGCTTTCATGGCCATGGCTGCTTCAATCAAG
AATAGGATGGCAAGCCAACCTGCCTCGAACAATGCTAGGCCGCCAACAGT
GCAGATCCGATGACAGCCTGTCAACCAGAAATCTGGTTGCTGCTCCACTT
AGAAGGGAATTAGTGNTGGNTGAATTTCTGATGTTTATCAATGGNTCTTG
NGGGAATGTACACTAGTTCTCTCTTCTATATGCCTTGATATGAAGGTTNA
TTGGCATGATTTGCTTTNCTTGGCAGNTNNGTCGTACTTTACTAAAGTTT
CCATTCTTTCAATGG
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