EY665145

Overview
NameEY665145
Unique NameEY665145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_CLOTE (GTP-binding protein era homolog OS=Clostridium tetani GN=era PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11
Identity = 36/86 (41.86%), Postives = 55/86 (63.95%), Query Frame = 2
Query:  386 KSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCI 643
            KSG++ V+ +PNVGKS+L N ++ ++LSIV++KPQTT + I  I +  D Q++  DTPG+ + K H L   M+K    A    D +
Sbjct:    3 KSGFITVIGRPNVGKSTLLNNIMKEKLSIVSHKPQTTRNNIQTILTQEDCQIVFVDTPGMHKPK-HKLGEYMVKVAEEALKGVDIV 87          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_CAUCR (GTP-binding protein era homolog OS=Caulobacter crescentus GN=era PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 35/91 (38.46%), Postives = 54/91 (59.34%), Query Frame = 2
Query:  386 KSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVD 658
            ++G+ A++  PN GKS+L N+M+G ++SIVT K QTT   + G+    D Q++L DTPGI   +   LD  M++   +    A+    LVD
Sbjct:    9 RAGFAAIIGAPNAGKSTLVNRMVGAKVSIVTQKVQTTRFPVRGVAIEGDTQIVLVDTPGIFSPR-RRLDRAMVRAAWAGSEEAEATVHLVD 98          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_CAUCN (GTP-binding protein era homolog OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=era PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 35/91 (38.46%), Postives = 54/91 (59.34%), Query Frame = 2
Query:  386 KSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVD 658
            ++G+ A++  PN GKS+L N+M+G ++SIVT K QTT   + G+    D Q++L DTPGI   +   LD  M++   +    A+    LVD
Sbjct:    9 RAGFAAIIGAPNAGKSTLVNRMVGAKVSIVTQKVQTTRFPVRGVAIEGDTQIVLVDTPGIFSPR-RRLDRAMVRAAWAGSEEAEATVHLVD 98          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_CORDI (GTP-binding protein era homolog OS=Corynebacterium diphtheriae GN=era PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 34/92 (36.96%), Postives = 57/92 (61.96%), Query Frame = 2
Query:  386 KSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVDA 661
            +SG+++ + +PN GKS+L N ++G++++I  N+P+TT H I GI    D Q+I+ DTPG + K   +L   + + V+    + D IA  V A
Sbjct:   11 RSGFISFVGRPNTGKSTLTNALVGEKIAITANQPETTRHPIRGIVHREDAQIIVVDTPG-LHKPRTLLGERLNEVVKDTYADMDLIAITVPA 101          
The following BLAST results are available for this feature:
BLAST of EY665145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 264
Match NameE-valueIdentityDescription
ERA_CLOTE5.210e-1141.86GTP-binding protein era homolog OS=Clostridium tet... [more]
ERA_CAUCR6.805e-1138.46GTP-binding protein era homolog OS=Caulobacter cre... [more]
ERA_CAUCN6.805e-1138.46GTP-binding protein era homolog OS=Caulobacter cre... [more]
ERA_CORDI8.887e-1136.96GTP-binding protein era homolog OS=Corynebacterium... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665145 ID=EY665145; Name=EY665145; organism=Citrus sinensis; type=EST; length=851bp
CTCGGNAGCAGGCGAATGAAATCAACATGAAAGCAAAGCTCCGATAATGG
AGCTAGGTGTACACATATCCTCTTCTTTTGGCAGTCTGTTCCCTCATTAC
AGCACATTAACAGCATATAGAGAAATTAAATTTGGGTTCCAAGGCAGAAG
TACTACTATCACTTGTAAAAGCAATGAACACCAAAGCCTTGTATTGTCAG
AGAAAGAAGTACAGCTACAAAAGCTTTGGAGTAACCAACGGGAAATGGAC
TTAAACGATGGTGATGAAATGGAATTTGACGATGCATCGTCGTTTCTATC
TCTGTCTGAAAAACCAGACAGGAATATGGCTTCGCCGGACGACTACGAGA
TTGAATAATTTGACTACGCCTCTCATCCAAATCACAAAAGCGGATATGTG
GCAGTACTATGGAAGCCAAATGTGGGGAAAAGTTCTCTCGCAAACCAAAT
GATCGGTCAACAGCTCTCAATTGTTACAAATAAGCCCCAAACTACGGGGC
ACCGTATTCTTGGTATCTGCTCTGGTCCAGATTATCAGATGATACTTTAT
GATACCCCTGGCATAATTGAGAAGAAAATTCACATGTTGGACTCTATGAT
GATGAAGAATGTCCGCAGTGCTGGGATTAACGCTGACTGTATTGCTGCTC
TCGTTGATGCTTGGTAAGCTCCTGAAAGAATTGATGACATTTCGCACTAC
GGAGTGGGAGACCACAAGATAAATTGCCTATATTGTCCGTACTGAATAAC
ATGATCTGATCAGCCGTGGTGAAATCGCTAAAAGCTTGAGTGCATGAGAA
ATTACAGATGTGATGAGGTATACCCGTGACGCAAATATGCCATGGAGTGG
A
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