EY665145

Overview
NameEY665145
Unique NameEY665145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_STAA2 (GTP-binding protein era homolog OS=Staphylococcus aureus (strain JH1) GN=era PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.035e-14
Identity = 39/93 (41.94%), Postives = 63/93 (67.74%), Query Frame = 2
Query:  383 HKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVDA 661
            HKSG+V+++ +PNVGKS+  N++IG +++I+++K QTT ++I G+ +  D Q+I  DTPGI + K H L   MMK  ++     D I  +V+A
Sbjct:    4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNA 95          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_STAA1 (GTP-binding protein era homolog OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=era PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.035e-14
Identity = 39/93 (41.94%), Postives = 63/93 (67.74%), Query Frame = 2
Query:  383 HKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVDA 661
            HKSG+V+++ +PNVGKS+  N++IG +++I+++K QTT ++I G+ +  D Q+I  DTPGI + K H L   MMK  ++     D I  +V+A
Sbjct:    4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPGIHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNA 95          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_THEM4 (GTP-binding protein era homolog OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=era PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.576e-14
Identity = 43/92 (46.74%), Postives = 62/92 (67.39%), Query Frame = 2
Query:  386 KSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVDA 661
            K+G+VA+  KPNVGKSSL N ++G+++ IV++KPQTT +RI  I +  D+Q+I  DTPG I K ++ L   M+K   SA    D I  ++DA
Sbjct:    2 KTGFVALAGKPNVGKSSLVNAIVGRKVLIVSDKPQTTRNRINVIHTTNDFQVIFVDTPG-IHKPLYRLGEYMVKAAVSALKGVDLILTVIDA 92          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_RICTY (GTP-binding protein era homolog OS=Rickettsia typhi GN=era PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.576e-14
Identity = 44/100 (44.00%), Postives = 68/100 (68.00%), Query Frame = 2
Query:  398 VAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVDAW*APERIDDISH 697
            V ++ +PN GKS+L N++IG++LSIVT K QTT   I GI +  D Q+ILYDTPGI E K  ML+  M++   S+  +AD + +++D+    + +DD++H
Sbjct:   11 VCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQIILYDTPGIFEPK-GMLEKAMVRCAWSSLYSADLVLSIIDSL---KPLDDMAH 106          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_PSEPW (GTP-binding protein era homolog OS=Pseudomonas putida (strain W619) GN=era PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.576e-14
Identity = 39/91 (42.86%), Postives = 59/91 (64.84%), Query Frame = 2
Query:  386 KSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVD 658
            + GYVA++ +PNVGKS+L N ++GQ+L+I + KPQTT H +LGI +  D Q I  DTPG+ +     L+  M +N  +A  + D +  +VD
Sbjct:    8 RCGYVAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGMHKANDKALNRYMNRNASAALKDVDVVIFVVD 98          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_PSEPK (GTP-binding protein era homolog OS=Pseudomonas putida (strain KT2440) GN=era PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.576e-14
Identity = 39/91 (42.86%), Postives = 59/91 (64.84%), Query Frame = 2
Query:  386 KSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVD 658
            + GYVA++ +PNVGKS+L N ++GQ+L+I + KPQTT H +LGI +  D Q I  DTPG+ +     L+  M +N  +A  + D +  +VD
Sbjct:   10 RCGYVAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGMHKANDKALNRYMNRNASAALKDVDVVIFVVD 100          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_PSEPG (GTP-binding protein era homolog OS=Pseudomonas putida (strain GB-1) GN=era PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.576e-14
Identity = 39/91 (42.86%), Postives = 59/91 (64.84%), Query Frame = 2
Query:  386 KSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVD 658
            + GYVA++ +PNVGKS+L N ++GQ+L+I + KPQTT H +LGI +  D Q I  DTPG+ +     L+  M +N  +A  + D +  +VD
Sbjct:    8 RCGYVAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGMHKANDKALNRYMNRNASAALKDVDVVIFVVD 98          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_PSEP1 (GTP-binding protein era homolog OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=era PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.576e-14
Identity = 39/91 (42.86%), Postives = 59/91 (64.84%), Query Frame = 2
Query:  386 KSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVD 658
            + GYVA++ +PNVGKS+L N ++GQ+L+I + KPQTT H +LGI +  D Q I  DTPG+ +     L+  M +N  +A  + D +  +VD
Sbjct:    8 RCGYVAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGMHKANDKALNRYMNRNASAALKDVDVVIFVVD 98          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_PSEE4 (GTP-binding protein era homolog OS=Pseudomonas entomophila (strain L48) GN=era PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.576e-14
Identity = 39/91 (42.86%), Postives = 59/91 (64.84%), Query Frame = 2
Query:  386 KSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVD 658
            + GYVA++ +PNVGKS+L N ++GQ+L+I + KPQTT H +LGI +  D Q I  DTPG+ +     L+  M +N  +A  + D +  +VD
Sbjct:    8 RCGYVAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGMHKANDKALNRYMNRNASAALKDVDVVIFVVD 98          
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_AZOVD (GTP-binding protein era homolog OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=era PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.576e-14
Identity = 39/91 (42.86%), Postives = 59/91 (64.84%), Query Frame = 2
Query:  386 KSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVD 658
            + GYVA++ +PNVGKS+L N ++GQ+L+I + KPQTT H +LGI +  D Q I  DTPG+ ++    L+  M K   +A  + D +  +VD
Sbjct:    8 RCGYVAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGLHKQNDKALNRYMNKTASAALKDVDVVIFVVD 98          
The following BLAST results are available for this feature:
BLAST of EY665145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 264
Match NameE-valueIdentityDescription
ERA_STAA25.035e-1441.94GTP-binding protein era homolog OS=Staphylococcus ... [more]
ERA_STAA15.035e-1441.94GTP-binding protein era homolog OS=Staphylococcus ... [more]
ERA_THEM46.576e-1446.74GTP-binding protein era homolog OS=Thermosipho mel... [more]
ERA_RICTY6.576e-1444.00GTP-binding protein era homolog OS=Rickettsia typh... [more]
ERA_PSEPW6.576e-1442.86GTP-binding protein era homolog OS=Pseudomonas put... [more]
ERA_PSEPK6.576e-1442.86GTP-binding protein era homolog OS=Pseudomonas put... [more]
ERA_PSEPG6.576e-1442.86GTP-binding protein era homolog OS=Pseudomonas put... [more]
ERA_PSEP16.576e-1442.86GTP-binding protein era homolog OS=Pseudomonas put... [more]
ERA_PSEE46.576e-1442.86GTP-binding protein era homolog OS=Pseudomonas ent... [more]
ERA_AZOVD6.576e-1442.86GTP-binding protein era homolog OS=Azotobacter vin... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665145 ID=EY665145; Name=EY665145; organism=Citrus sinensis; type=EST; length=851bp
CTCGGNAGCAGGCGAATGAAATCAACATGAAAGCAAAGCTCCGATAATGG
AGCTAGGTGTACACATATCCTCTTCTTTTGGCAGTCTGTTCCCTCATTAC
AGCACATTAACAGCATATAGAGAAATTAAATTTGGGTTCCAAGGCAGAAG
TACTACTATCACTTGTAAAAGCAATGAACACCAAAGCCTTGTATTGTCAG
AGAAAGAAGTACAGCTACAAAAGCTTTGGAGTAACCAACGGGAAATGGAC
TTAAACGATGGTGATGAAATGGAATTTGACGATGCATCGTCGTTTCTATC
TCTGTCTGAAAAACCAGACAGGAATATGGCTTCGCCGGACGACTACGAGA
TTGAATAATTTGACTACGCCTCTCATCCAAATCACAAAAGCGGATATGTG
GCAGTACTATGGAAGCCAAATGTGGGGAAAAGTTCTCTCGCAAACCAAAT
GATCGGTCAACAGCTCTCAATTGTTACAAATAAGCCCCAAACTACGGGGC
ACCGTATTCTTGGTATCTGCTCTGGTCCAGATTATCAGATGATACTTTAT
GATACCCCTGGCATAATTGAGAAGAAAATTCACATGTTGGACTCTATGAT
GATGAAGAATGTCCGCAGTGCTGGGATTAACGCTGACTGTATTGCTGCTC
TCGTTGATGCTTGGTAAGCTCCTGAAAGAATTGATGACATTTCGCACTAC
GGAGTGGGAGACCACAAGATAAATTGCCTATATTGTCCGTACTGAATAAC
ATGATCTGATCAGCCGTGGTGAAATCGCTAAAAGCTTGAGTGCATGAGAA
ATTACAGATGTGATGAGGTATACCCGTGACGCAAATATGCCATGGAGTGG
A
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