EY665140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 352.058 bits (902), Expect = 2.642e-96 Identity = 175/224 (78.12%), Postives = 190/224 (84.82%), Query Frame = 3 Query: 45 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MA STMALSS + GKAV +APS +EL GR+SMRKT VS SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA + IFSEGGLDYLGNPSL+HAQSIL+IWA QV+LMGAV+GYR+AG PLGE+ DPLYP GSF PLGLA++P AEL VKE++ FSM Sbjct: 1 MAASTMALSSPALAGKAVKVAPSSSELFGNGRVSMRKTVKAPVSD-SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPERSAELKVKELKNGRLAMFSM 223 HSP 2 Score: 75.0998 bits (183), Expect = 6.267e-13 Identity = 35/49 (71.43%), Postives = 37/49 (75.51%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GPLENL HL DPVNNNAW T P Sbjct: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVP 262
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 350.132 bits (897), Expect = 1.004e-95 Identity = 176/224 (78.57%), Postives = 187/224 (83.48%), Query Frame = 3 Query: 45 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MA +TMALSSS F GKAV S +E+ R+SMRKT + GSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK + IFSEGGL YLGNPSL+HAQSILAIWACQVVLMGAV+GYR+AG PLGEV DPLYP GSF PLGLAD+ AFAEL VKEI+ FSM Sbjct: 1 MAAATMALSSSTFAGKAVKNLSSSSEVQGDARVSMRKTAATK-KVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSM 223 HSP 2 Score: 75.0998 bits (183), Expect = 6.267e-13 Identity = 35/49 (71.43%), Postives = 37/49 (75.51%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GPLENL HL DPVNNNAW T P Sbjct: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVP 262
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 350.132 bits (897), Expect = 1.004e-95 Identity = 177/226 (78.32%), Postives = 189/226 (83.63%), Query Frame = 3 Query: 45 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MA STMA+SS+ G + + G GRI+MRKT K +SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKA + IFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV+GYRIAG PLGEV DPLYP GSF PLGLAD+P AFAEL VKE++ FSM Sbjct: 1 MAASTMAISSTAMAGTPIKVGSFGE-----GRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSM 221 HSP 2 Score: 73.9442 bits (180), Expect = 1.396e-12 Identity = 34/49 (69.39%), Postives = 37/49 (75.51%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GPLENL H+ DPVNNNAW T P Sbjct: 212 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVP 260
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 1.311e-95 Identity = 176/226 (77.88%), Postives = 191/226 (84.51%), Query Frame = 3 Query: 45 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MA +TM+LSSS F GKAV PS + L R++MRKT +K+ VSS SPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA WFKA + IFS+GGLDYLGNPSL+HAQS+LAIWACQVVLMGAV+GYRIAG PLGE+ DPLYP GSF PLGLA+ P AFAEL VKEI+ FSM Sbjct: 1 MAATTMSLSSSSFAGKAVKNLPS-SALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSM 225 HSP 2 Score: 71.633 bits (174), Expect = 6.928e-12 Identity = 33/49 (67.35%), Postives = 38/49 (77.55%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GPLE+L H+ DPVNNNAW + T P Sbjct: 216 KNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFVP 264
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 2.473e-94 Identity = 177/228 (77.63%), Postives = 190/228 (83.33%), Query Frame = 3 Query: 45 MATSTMALSS-SFVGKAVNLA--PSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MA S+MALSS + GK V + PS EL G R +MRK T K SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKA + IFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAV+GYRIAG PLGEV DPLYP GSF PLGLAD+P AFAEL VKE++ FSM Sbjct: 1 MAASSMALSSPTLTGKPVETSANPSSQELG-GARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSM 227 HSP 2 Score: 74.7146 bits (182), Expect = 8.184e-13 Identity = 35/49 (71.43%), Postives = 37/49 (75.51%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GPLENL HL DPVNNNAW T P Sbjct: 218 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVP 266
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 2.473e-94 Identity = 174/226 (76.99%), Postives = 192/226 (84.96%), Query Frame = 3 Query: 45 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAG-WPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MA STMALSS +F GKAVNL+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA + IFS+GGLDYLGNPSL+HAQSILAIWA QV+LMGAV+GYR+AG PLGE D LYP GSF PLGLA +P AFAEL VKE++ FSM Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSM 226 HSP 2 Score: 74.3294 bits (181), Expect = 1.069e-12 Identity = 34/49 (69.39%), Postives = 37/49 (75.51%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GP+ENL HL DPVNNNAW T P Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVP 265
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 3.229e-94 Identity = 174/225 (77.33%), Postives = 189/225 (84.00%), Query Frame = 3 Query: 48 ATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRK--TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 ++S+MALSS + GK + L PS EL R +MRK T K SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKA + IFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAV+GYRIAG PLGEV DPLYP GSF PLGLAD+P AFAEL VKE++ FSM Sbjct: 5 SSSSMALSSPTLAGKQLKLNPSSQELG-AARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSM 228 HSP 2 Score: 74.7146 bits (182), Expect = 8.184e-13 Identity = 35/49 (71.43%), Postives = 37/49 (75.51%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GPLENL HL DPVNNNAW T P Sbjct: 219 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVP 267
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 3.229e-94 Identity = 167/194 (86.08%), Postives = 175/194 (90.21%), Query Frame = 3 Query: 132 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 GR+SMRKT SK+VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA WFKA + IFSEGGLDYLGN SLIHAQSILAIWA QV+LMGAV+GYRIAG PLGEVTDP+YP GSF PL LAD+P AFAEL VKEI+ FSM Sbjct: 11 GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSM 204 HSP 2 Score: 73.1738 bits (178), Expect = 2.381e-12 Identity = 34/49 (69.39%), Postives = 37/49 (75.51%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GPLENL HL +PVNNNAW T P Sbjct: 195 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNNAWAYATNFVP 243
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 1.227e-93 Identity = 173/226 (76.55%), Postives = 191/226 (84.51%), Query Frame = 3 Query: 45 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAG-WPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MA STMALSS +F GKAV L+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA + IFS+GGLDYLGNPSL+HAQSILAIWA QV+LMGAV+GYR+AG PLGE D LYP GSF PLGLA +P AFAEL VKE++ FSM Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSM 226 HSP 2 Score: 74.3294 bits (181), Expect = 1.069e-12 Identity = 34/49 (69.39%), Postives = 37/49 (75.51%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GP+ENL HL DPVNNNAW T P Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVP 265
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 343.199 bits (879), Expect = 1.227e-93 Identity = 177/227 (77.97%), Postives = 189/227 (83.26%), Query Frame = 3 Query: 45 MATSTMALSSSFVGKAVNLAPS-GNELSNGGRISMRKTGSK---SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MA +TMALSS + +A APS + L RI+MRKT +K + SSGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA + IFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAV+GYRIAG PLGEV DPLYP G+F PLGLAD+P AFAEL VKEI+ FSM Sbjct: 1 MAAATMALSSPVMARA---APSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 224 HSP 2 Score: 74.7146 bits (182), Expect = 8.184e-13 Identity = 35/49 (71.43%), Postives = 37/49 (75.51%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GPLENL HL DPVNNNAW T P Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 263 The following BLAST results are available for this feature:
BLAST of EY665140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665140 ID=EY665140; Name=EY665140; organism=Citrus sinensis; type=EST; length=913bpback to top |