EY665140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 339.347 bits (869), Expect = 1.772e-92 Identity = 168/220 (76.36%), Postives = 183/220 (83.18%), Query Frame = 3 Query: 84 GKAVNLAPSGNELSNGG-------RISMRKTGSKSVS---SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 G+ +L P N+L G R++MRK +K ++ S SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA A IFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAV+GYRIAG PLGEVTDP+YP GSF PLGLA++P AFAEL VKEI+ FSM Sbjct: 14 GQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSM 233 HSP 2 Score: 73.9442 bits (180), Expect = 1.396e-12 Identity = 34/49 (69.39%), Postives = 37/49 (75.51%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GP+ENL HL DPVNNNAW T P Sbjct: 224 KNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVP 272
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 339.347 bits (869), Expect = 1.772e-92 Identity = 175/226 (77.43%), Postives = 187/226 (82.74%), Query Frame = 3 Query: 45 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MA +TMALSS + GKA ++ GRI+MRK+ +K +SGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA + IFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAV+GYRIAG PLGEV DPLYP GSF PLGLAD+P AFAEL VKEI+ FSM Sbjct: 1 MAAATMALSSPALAGKAAA------KVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 220 HSP 2 Score: 74.7146 bits (182), Expect = 8.184e-13 Identity = 35/49 (71.43%), Postives = 37/49 (75.51%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GPLENL HL DPVNNNAW T P Sbjct: 211 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 259
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 1.149e-91 Identity = 170/233 (72.96%), Postives = 190/233 (81.55%), Query Frame = 3 Query: 45 MATSTMALSSSFVGKAVN-LAPSGNELSNGG------RISMRK-TGSKSVSSG--SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MA+ + +F G ++ + P N+L G R++MRK TG KSV++ SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA A IFSEGGLDYLG+P LIHAQSILAIWACQV+LMGA++GYR+AG PLGEVTDP+YP G+F PLGLAD+P AFAEL VKEI+ FSM Sbjct: 5 MASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSM 237 HSP 2 Score: 73.9442 bits (180), Expect = 1.396e-12 Identity = 34/49 (69.39%), Postives = 37/49 (75.51%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GP+ENL HL DPVNNNAW T P Sbjct: 228 KNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVP 276
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 334.339 bits (856), Expect = 5.700e-91 Identity = 168/233 (72.10%), Postives = 190/233 (81.55%), Query Frame = 3 Query: 45 MATSTMALSSSFVGKAVN-LAPSGNELSNGG------RISMRK-TGSKSVSSG--SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MA+ + +F G ++ + P N+L G R++MRK TG KSV++ SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA A IFSEGGLDYLG+P LIHAQSILAIWACQV+LMGA++GYR+AG PLGEVTDP+YP G+F PLGLAD+P AFA++ VKEI+ FSM Sbjct: 5 MASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSM 237 HSP 2 Score: 73.9442 bits (180), Expect = 1.396e-12 Identity = 34/49 (69.39%), Postives = 37/49 (75.51%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GP+ENL HL DPVNNNAW T P Sbjct: 228 KNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVP 276
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 334.339 bits (856), Expect = 5.700e-91 Identity = 175/224 (78.12%), Postives = 186/224 (83.04%), Query Frame = 3 Query: 45 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MA STMALSSS G+A+ LAPS EL G R+SMRKT K+VSSGSPWYGPDRVKYLGPFSGE PSYLTGEF G LSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA + IFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAV+GYRIAG PLGEVTDP+YP GSF PLGLAD+P A AEL VKE++ FSM Sbjct: 1 MAASTMALSSSSLAGQAMKLAPSTPELGVG-RVSMRKTAPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSM 215 HSP 2 Score: 76.2554 bits (186), Expect = 2.813e-13 Identity = 36/49 (73.47%), Postives = 38/49 (77.55%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GPLENL HL DPVNNNAW T L P Sbjct: 206 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATKLCP 254
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 5.899e-88 Identity = 165/228 (72.37%), Postives = 183/228 (80.26%), Query Frame = 3 Query: 45 MATSTMALSSSFVGKAVNLAPSGNELSNG-----GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MATST AL+S+F G+ + NELS R+ M SK+ SGS WYG DR YLGPFSG PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKA + IF+EGGLDYLGNPSL+HAQSILAIWACQV+LMGAV+GYR+AG PLGEV DP+YP GSF PLGLAD+P AFAEL VKE++ FSM Sbjct: 1 MATSTAALTSTFSGQQLKPV---NELSRKVGAGEARVQMMAPKSKA-PSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSM 224 HSP 2 Score: 70.0922 bits (170), Expect = 2.016e-11 Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GP+ENL HL DP NNAW T +P Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNAWAYATNFTP 263
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 1.112e-86 Identity = 161/229 (70.31%), Postives = 182/229 (79.48%), Query Frame = 3 Query: 45 MATSTMALSSSFVGKAVNLAPSGNELSNG------GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MA +T S++ G++ L NELS R++MR+T SKS S + WYG DR K+LGPFSGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA++GVKFGEAVWFKA A IFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAV+GYR+AG PLGEVTDP+YP GSF PLGLAD+P FAEL VKEI+ FSM Sbjct: 1 MAAATAMHSTALAGQS--LVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSM 227 HSP 2 Score: 70.8626 bits (172), Expect = 1.182e-11 Identity = 34/49 (69.39%), Postives = 36/49 (73.47%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GPLENL HL DPV NNAW T P Sbjct: 218 KNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSPP 266
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 318.546 bits (815), Expect = 3.237e-86 Identity = 154/187 (82.35%), Postives = 163/187 (87.17%), Query Frame = 3 Query: 153 TGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 T K SS SPW+GPD VKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKA + IFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAV+GYRIAG PLGEV DPLYP GSF PLGLA+ P AFAEL VKE++ FSM Sbjct: 1 TTKKVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELKNGRLAMFSM 187 HSP 2 Score: 72.4034 bits (176), Expect = 4.062e-12 Identity = 34/49 (69.39%), Postives = 36/49 (73.47%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFV AIVTG+GPLENL HL DPVNNNAW T P Sbjct: 178 KNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNNAWSYATNFVP 226
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 318.546 bits (815), Expect = 3.237e-86 Identity = 162/229 (70.74%), Postives = 181/229 (79.04%), Query Frame = 3 Query: 45 MATSTMALSSSFVGKAVNLAPSGNELS------NGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MATS + S+F G+ NEL GGR+SMR+T + +S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKA + IFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG V+GYR+ G PLGE DP+YP G+F PLGLAD+P AFAEL VKEI+ FSM Sbjct: 1 MATSAIQ-QSAFAGQTA--LKQSNELVCKIGAVGGGRVSMRRTVKSAPTS--IWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSM 224 HSP 2 Score: 70.8626 bits (172), Expect = 1.182e-11 Identity = 33/49 (67.35%), Postives = 36/49 (73.47%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GP+ENL HL DPV NNAW T P Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVP 263
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 7.973e-85 Identity = 160/226 (70.80%), Postives = 176/226 (77.88%), Query Frame = 3 Query: 45 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MA +TMA++S + VGK A ++ GRI+MRKT +K SGSPWYG DRV YLGP SG PPSYLTGEFPGDYGWDT GLSADPETFAKNRELEVIHCRWA+ LGCVFPELLARNGVKFGE VWFKA + IFSEGGL + GNPSL+HAQSILAIWACQVVLMGAV+GY +AG LGEV DPLY GSF PLGL D+P FAEL VKEI+ FSM Sbjct: 1 MAAATMAITSRALVGKP---AAGTRDVFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSM 223 HSP 2 Score: 73.9442 bits (180), Expect = 1.396e-12 Identity = 34/49 (69.39%), Postives = 37/49 (75.51%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GP+ENL HL DPVNNNAW T P Sbjct: 214 KNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNNAWAYATNFVP 262 The following BLAST results are available for this feature:
BLAST of EY665140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665140 ID=EY665140; Name=EY665140; organism=Citrus sinensis; type=EST; length=913bpback to top |