EY665140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 1.964e-83 Identity = 159/229 (69.43%), Postives = 179/229 (78.17%), Query Frame = 3 Query: 45 MATSTMALSSSFVGKAVNLAPSGNELSNG------GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MAT + S+FVG+AV S NE GRI+MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKA + IFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG V+GYR+ G PLGE D +YP G+F PLGLAD+P AFAEL VKEI+ FSM Sbjct: 1 MATCAIQ-QSAFVGQAVG--KSQNEFIRKVGNFGEGRITMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 224 HSP 2 Score: 70.0922 bits (170), Expect = 2.016e-11 Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GP+ENL H+ DPV NNAW T P Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYATNFVP 263
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 3.350e-83 Identity = 156/228 (68.42%), Postives = 179/228 (78.51%), Query Frame = 3 Query: 45 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MA S + ++SF+G A P +EL +GGRI+MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKA A IFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG V+GYR+ G PLGE D +YP G+F PLGLAD+P FAEL VKE++ FSM Sbjct: 1 MAASALHQTTSFLGTA----PRRDELVRRVGDSGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSM 222 HSP 2 Score: 69.707 bits (169), Expect = 2.633e-11 Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GP+ENL H+ DPV NNAW T P Sbjct: 213 KNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVP 261
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 3.350e-83 Identity = 156/228 (68.42%), Postives = 179/228 (78.51%), Query Frame = 3 Query: 45 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MA S + ++SF+G A P +EL +GGRI+MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKA A IFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG V+GYR+ G PLGE D +YP G+F PLGLAD+P FAEL VKE++ FSM Sbjct: 1 MAASALHQTTSFLGTA----PRRDELVRRVGDSGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSM 222 HSP 2 Score: 69.707 bits (169), Expect = 2.633e-11 Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GP+ENL H+ DPV NNAW T P Sbjct: 213 KNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVP 261
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 308.531 bits (789), Expect = 3.350e-83 Identity = 156/210 (74.29%), Postives = 173/210 (82.38%), Query Frame = 3 Query: 45 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAF 659 MATST+ S+F G+ + L P NEL NGGR+SMR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+NGVKFGEAVWFKA + IF EGGLDYLGNP+L+HAQSILAIWACQVVLMGAV+GYR+ G PLGE D LYP G+F PLGLA++P AF Sbjct: 1 MATSTIQ-QSAFAGQTL-LKPQ-NELVRKVGGNGGRVSMRRTIKSAPES--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLGLAEDPEAF 205
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 7.462e-83 Identity = 157/229 (68.56%), Postives = 178/229 (77.73%), Query Frame = 3 Query: 45 MATSTMALSSSFVGKAVNLAPSGNELS------NGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MATS + S+F G+ S NEL NGGR +MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKA + IFSEGGLDYLGNP+LIHAQSILA+WA QVVLMG ++GYR+ G PLGE D +YP G+F PLGLAD+P AFAEL VKEI+ FSM Sbjct: 1 MATSAIE-QSAFAGQTA--LKSQNELVRKIGSFNGGRATMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 224 HSP 2 Score: 69.707 bits (169), Expect = 2.633e-11 Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GP+ENL H+ DPV NNAW T P Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVP 263
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 1.273e-82 Identity = 158/228 (69.30%), Postives = 176/228 (77.19%), Query Frame = 3 Query: 45 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MAT++ SSS G+ + L P NEL + RI+MR+T + S WYGPDR KYLGPFS PSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+NG+KFGEAVWFKA A IFSEGGLDY GNP+LIHAQSILAIWACQVVLMG ++GYR+ G LGE DPL P G+F PLGLAD+P A AEL VKEI+ FSM Sbjct: 1 MATASAIQSSSLAGQTL-LRPQQNELVKKVGTAQARITMRRTVRSAPES--IWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLADDPEACAELKVKEIKNGRLAMFSM 225 HSP 2 Score: 70.8626 bits (172), Expect = 1.182e-11 Identity = 33/49 (67.35%), Postives = 36/49 (73.47%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GP+ENL HL DPV NNAW T P Sbjct: 216 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVP 264
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 1.078e-81 Identity = 157/229 (68.56%), Postives = 176/229 (76.86%), Query Frame = 3 Query: 45 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MATS + S+F G+ S NEL GGR +MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKA + IFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG V+GYR+ G PLGE D +YP G+F PLGLAD+P AFAEL VKEI+ FSM Sbjct: 1 MATSAIQ-QSAFAGQTA--LKSQNELVRKIGSFGGGRATMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 224 HSP 2 Score: 70.0922 bits (170), Expect = 2.016e-11 Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GP+ENL H+ DPV NNAW T P Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVP 263
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 3.135e-81 Identity = 146/195 (74.87%), Postives = 163/195 (83.59%), Query Frame = 3 Query: 129 GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 GGR++MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKA + IFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG V+GYR+ G PLGE D +YP G+F PLGLAD+P AFAEL VKEI+ FSM Sbjct: 4 GGRVTMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 196 HSP 2 Score: 70.0922 bits (170), Expect = 2.016e-11 Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GP+ENL H+ DPV NNAW T P Sbjct: 187 KNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFVP 235
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 5.348e-81 Identity = 148/194 (76.29%), Postives = 164/194 (84.54%), Query Frame = 3 Query: 132 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 GR SMR+T K+V S WYG DR K+LGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+FPELL++NGV+FGEAVWFKA A IFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG ++GYR+ G PLGE DPLYP G+F PLGLAD+P AFAEL VKEI+ FSM Sbjct: 32 GRFSMRRT-VKAVPQ-SIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223 HSP 2 Score: 70.4774 bits (171), Expect = 1.543e-11 Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GP+ENL H+ DPV NNAW T P Sbjct: 214 KNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANNAWAFATNFVP 262
BLAST of EY665140 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 2.654e-80 Identity = 157/229 (68.56%), Postives = 175/229 (76.42%), Query Frame = 3 Query: 45 MATSTMALSSSFVGKAVNLAPSGNEL----SNGG--RISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAXAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYRIAGWPLGEVTDPLYPCGSFYPLGLADEPXAFAELMVKEIRMEGWLCFSM 713 MATS + S+F GK GNE N G R +MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPELL +NGVKFGEAVWFKA + IF+EGGLDYLGNP+LIHAQSILAIWA QVVLMG V+GYR+ G PLGE DPLYP G+F PLGLAD+P +FAEL VKE++ FSM Sbjct: 1 MATSAIQ-QSAFTGKTG--LRQGNEFIRKRGNFGQARFTMRRTVKSAPES--IWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSM 224 HSP 2 Score: 68.9366 bits (167), Expect = 4.491e-11 Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 2 Query: 683 QNGRLAMFLHVGFFVQAIVTGRGPLENLXRHLXDPVNNNAWGLRTTLSP 829 +NGRLAMF GFFVQAIVTG+GP++NL H+ DPV NNAW T P Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVP 263 The following BLAST results are available for this feature:
BLAST of EY665140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665140 ID=EY665140; Name=EY665140; organism=Citrus sinensis; type=EST; length=913bpback to top |