EY665138

Overview
NameEY665138
Unique NameEY665138
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length464
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665138 vs. ExPASy Swiss-Prot
Match: TCTP_FRAAN (Translationally-controlled tumor protein homolog OS=Fragaria ananassa GN=TCTP PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 3.262e-30
Identity = 65/82 (79.27%), Postives = 70/82 (85.37%), Query Frame = 2
Query:   14 FVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALNEVKC 259
            FVT++KR+IKLLTPKL  E+QE FKKNIEGATKFLLSKLSDLQFFVGESM DD  LVFA YKEGATDP F+Y A  L EVKC
Sbjct:   89 FVTWVKRYIKLLTPKLEGEQQETFKKNIEGATKFLLSKLSDLQFFVGESMGDDTSLVFASYKEGATDPIFIYFAHGLKEVKC 170          
BLAST of EY665138 vs. ExPASy Swiss-Prot
Match: TCTP_SOLTU (Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 5.564e-30
Identity = 61/82 (74.39%), Postives = 67/82 (81.71%), Query Frame = 2
Query:   14 FVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALNEVKC 259
            FVTY+KR+IK LTPKL  E QE FKKNIE ATKFLLSKL D QFFVGE MHDD  LVFAYYK+G+ DPTFLY+A  L E+KC
Sbjct:   87 FVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKFLLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168          
BLAST of EY665138 vs. ExPASy Swiss-Prot
Match: TCTP_TOBAC (Translationally-controlled tumor protein homolog OS=Nicotiana tabacum GN=TCTP PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 7.267e-30
Identity = 61/82 (74.39%), Postives = 71/82 (86.59%), Query Frame = 2
Query:   14 FVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALNEVKC 259
            FV YMK++IK LTPKL  E++E+FK NI+GATK+LLSKLSDLQFFVGESM DD  +VFAYYK+GATDPTFLY+A  L EVKC
Sbjct:   87 FVAYMKKYIKNLTPKLGAEQEEVFKNNIQGATKYLLSKLSDLQFFVGESMADDTGMVFAYYKDGATDPTFLYLAHGLKEVKC 168          
BLAST of EY665138 vs. ExPASy Swiss-Prot
Match: TCTP_BRAOL (Translationally-controlled tumor protein homolog OS=Brassica oleracea GN=TCTP PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.240e-29
Identity = 60/82 (73.17%), Postives = 68/82 (82.93%), Query Frame = 2
Query:   14 FVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALNEVKC 259
            F+ Y+K++IKLLTPKL+ E+QE FKK IEGATKFLL KL D QFFVGE MHDD  +VFAYYKEGAT+PTFLY A  L EVKC
Sbjct:   87 FIAYIKKYIKLLTPKLTPEQQEEFKKGIEGATKFLLPKLKDFQFFVGEGMHDDSTIVFAYYKEGATNPTFLYFAHGLKEVKC 168          
BLAST of EY665138 vs. ExPASy Swiss-Prot
Match: TCTP_HORVU (Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 3.053e-28
Identity = 58/82 (70.73%), Postives = 66/82 (80.49%), Query Frame = 2
Query:   14 FVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALNEVKC 259
            F+ Y+KR+IK LT KL  E  + FKKN+E ATK+LLSKL DLQFFVGESMHDDG +VFAYY+EGA DPTFLY A  L EVKC
Sbjct:   87 FIAYIKRYIKNLTAKLEGEELDAFKKNVESATKYLLSKLKDLQFFVGESMHDDGSVVFAYYREGAADPTFLYFAHGLKEVKC 168          
BLAST of EY665138 vs. ExPASy Swiss-Prot
Match: TCTP_WHEAT (Translationally-controlled tumor protein homolog OS=Triticum aestivum GN=TCTP PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 8.883e-28
Identity = 57/82 (69.51%), Postives = 68/82 (82.93%), Query Frame = 2
Query:   14 FVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALNEVKC 259
            F+++MKR+IK L+ KL  +  ++FKKN+E ATK+LLSKL DLQFFVGESMHDDG +VFAYYKEGA DPTFLY A  L EVKC
Sbjct:   87 FISHMKRYIKNLSAKLEGDDLDVFKKNVESATKYLLSKLKDLQFFVGESMHDDGGVVFAYYKEGAADPTFLYFAHGLKEVKC 168          
BLAST of EY665138 vs. ExPASy Swiss-Prot
Match: TCTP_CUCME (Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.086e-25
Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 2
Query:   14 FVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALNEVKC 259
            F++ +K++IK LTP L  E+QE FK  IEGA K+LL K+ DLQFFVGESM DD  +VFAYYKEGATDPTFLY+A  L EVKC
Sbjct:   87 FLSCIKKYIKKLTPLLQGEQQEAFKNKIEGAVKYLLPKVKDLQFFVGESMADDSAMVFAYYKEGATDPTFLYIAPGLKEVKC 168          
BLAST of EY665138 vs. ExPASy Swiss-Prot
Match: TCTP_MAIZE (Translationally-controlled tumor protein homolog OS=Zea mays GN=TCTP PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.048e-24
Identity = 52/83 (62.65%), Postives = 65/83 (78.31%), Query Frame = 2
Query:   11 AFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALNEVKC 259
            +FV+Y+K++IK LT  L  E+ + FKK +EGATKFLLSKL DLQFFVGESM DD  + FAYYK+GAT+ TFLY +  L E+KC
Sbjct:   85 SFVSYIKKYIKNLTAVLEPEKADEFKKGVEGATKFLLSKLKDLQFFVGESMKDDASVAFAYYKDGATNSTFLYFSHGLKEIKC 167          
The following BLAST results are available for this feature:
BLAST of EY665138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
TCTP_FRAAN3.262e-3079.27Translationally-controlled tumor protein homolog O... [more]
TCTP_SOLTU5.564e-3074.39Translationally-controlled tumor protein homolog O... [more]
TCTP_TOBAC7.267e-3074.39Translationally-controlled tumor protein homolog O... [more]
TCTP_BRAOL1.240e-2973.17Translationally-controlled tumor protein homolog O... [more]
TCTP_HORVU3.053e-2870.73Translationally-controlled tumor protein homolog O... [more]
TCTP_WHEAT8.883e-2869.51Translationally-controlled tumor protein homolog O... [more]
TCTP_CUCME1.086e-2567.07Translationally-controlled tumor protein homolog O... [more]
TCTP_MAIZE2.048e-2462.65Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-E01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665138 ID=EY665138; Name=EY665138; organism=Citrus sinensis; type=EST; length=464bp
CCACGCGTCCGCGTTTGTAACATACATGAAGAGATTCATCAAGTTGCTGA
CGCCCAAGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAAGAATATTGAG
GGAGCGACCAAGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATTCTTTGT
TGGGGAGAGCATGCATGATGATGGCTGTCTTGTCTTTGCTTACTACAAGG
AAGGTGCGACCGACCCAACATTTTTGTATATGGCTGATGCATTGAACGAG
GTGAAGTGCTAAGCTGGGCTTCGAAGAGGAAGTGCCTGCTGTAGTTCTAA
TTTTAATTATTGCCCGCGGTTATTTTTATGTATCTTTTGTGCTGGTTTAC
TCGGGACTTGTGCTTGCTGTTTTTTAGTTTTTATTTTGACATAAACAATA
TGTTTTTCTGCTCTTAATTATTGGGTTTTATGGTTTGAGATTGAAAAAAA
NANNNNAAATAAAT
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