EY665131

Overview
NameEY665131
Unique NameEY665131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS19_PAGMA (40S ribosomal protein S19 OS=Pagrus major GN=rps19 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.038e-36
Identity = 69/137 (50.36%), Postives = 99/137 (72.26%), Query Frame = 3
Query:  102 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRIVVA 512
            TVKDV+  EFV+A +A LK+SGK+++P W D+VK  + KELAP D +W+Y+R+AS  R +YLR G GVGS  +IYG  +RNG  P H+   S  +AR +LQ L+ + +I+ +P GGRR+T+ G RDLD++AG++  A
Sbjct:    5 TVKDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGKHKELAPSDENWFYIRSASTVRHLYLRGGAGVGSMTKIYGSRQRNGVCPAHYSVGSKNVARKVLQALELLKMIEKDPNGGRRLTAQGTRDLDRIAGQVAAA 141          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS19_EMENI (40S ribosomal protein S19 OS=Emericella nidulans GN=rps19 PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.540e-36
Identity = 71/132 (53.79%), Postives = 96/132 (72.73%), Query Frame = 3
Query:  102 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIID-IEPKGGRRITSSGQRDLDQVA 494
            TV+DV   +F+ AY+A LKR GK+ +P W D VKT+   EL P D DWYYVRAA++AR IYLR+ +GVG  R+++G +K  GSRP H   +SGA+ R +LQ L+ + +++  E KGGRRIT SGQRDLD++A
Sbjct:    5 TVRDVDAQKFIVAYAAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWYYVRAAAVARHIYLRKTVGVGRLRKVHGSTKNRGSRPAHHVDASGAVDRKVLQSLEKIGVLEQDEEKGGRRITQSGQRDLDRIA 136          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS19S_ASCSU (40S ribosomal protein S19S OS=Ascaris suum GN=RPS19S PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.615e-33
Identity = 66/140 (47.14%), Postives = 97/140 (69.29%), Query Frame = 3
Query:   87 MATARTVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKG-GRRITSSGQRDLDQVAGRI 503
            M    +VKDV  HE V+  +  LK+SGK+++P W+D+VK    KELAP D DWYYVR AS+AR++Y+R   GVG+ RR+YGG+KR G  P HF ++SG++ R  LQ L+ +  ++  P G GR +T  G++DLD++A ++
Sbjct:    1 MVKQPSVKDVDQHEIVRYIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRSPTGVGALRRVYGGNKRRGVTPNHFARASGSVIRKALQTLEAIKWVEKHPDGNGRILTKQGRKDLDRIASQM 140          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS19B_YEAST (40S ribosomal protein S19-B OS=Saccharomyces cerevisiae GN=RPS19B PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.367e-32
Identity = 64/134 (47.76%), Postives = 98/134 (73.13%), Query Frame = 3
Query:  102 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPD-WYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGR 500
            +V+DV+  +F+ AY++ L+R GK+E+P + DIVKT+   E+ P D + W+Y RAAS+AR IY+R+ +GVG   ++YGG+K  G RP     +SG+I R +LQ L+ + I++I PKGGRRI+ +GQRDLD++A +
Sbjct:    5 SVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRDLDRIAAQ 138          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS19A_YEAST (40S ribosomal protein S19-A OS=Saccharomyces cerevisiae GN=RPS19A PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.367e-32
Identity = 64/134 (47.76%), Postives = 98/134 (73.13%), Query Frame = 3
Query:  102 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPD-WYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGR 500
            +V+DV+  +F+ AY++ L+R GK+E+P + DIVKT+   E+ P D + W+Y RAAS+AR IY+R+ +GVG   ++YGG+K  G RP     +SG+I R +LQ L+ + I++I PKGGRRI+ +GQRDLD++A +
Sbjct:    5 SVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRDLDRIAAQ 138          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS19_ENTHI (40S ribosomal protein S19 OS=Entamoeba histolytica GN=RPS19 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.194e-32
Identity = 63/134 (47.01%), Postives = 91/134 (67.91%), Query Frame = 3
Query:  105 VKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRIV 506
            +KDV   +F+KAY+ HLK+SGK+E+P W D VKT   KELAP +PDW Y+RAA++ARK+YL  G+GV + RR YG        P H    SG + R+ILQQL+ M I+  + + GR +T  G++D+D++A + +
Sbjct:    7 IKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVYLNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIVG-KIQSGRSLTKEGRKDMDKIASKFI 139          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS19G_ASCSU (40S ribosomal protein S19G OS=Ascaris suum GN=RPS19G PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.511e-31
Identity = 65/140 (46.43%), Postives = 94/140 (67.14%), Query Frame = 3
Query:   87 MATARTVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKG-GRRITSSGQRDLDQVAGRI 503
            M  A +VKDV  HE V+  +  LK+SGK+++P W+D+ K    KELAP + DWYYVR AS+AR++Y+R   GV + R +YGGSKR G  P HF K+SG++ R  LQ L+ +  +   P G GR +T  G++DLD++A ++
Sbjct:    1 MVKATSVKDVDQHEIVQHIAKFLKKSGKVKVPEWSDVTKMGISKELAPLNSDWYYVRTASIARRLYVRSPTGVDALRLVYGGSKRRGVVPNHFAKASGSVIRKALQTLEAIKWVQKHPDGNGRVLTKQGRKDLDRIASQM 140          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS19B_DROME (40S ribosomal protein S19b OS=Drosophila melanogaster GN=RpS19b PE=1 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 4.397e-31
Identity = 63/135 (46.67%), Postives = 88/135 (65.19%), Query Frame = 3
Query:  102 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRIV 506
            TVK++  H   K  +A LK+SGK+ +P     +KT +FKE AP D DW+Y R AS+ R +YLR   GVG+F ++Y G KRNG RP   C+SS    R  LQ L+  N+++  P GGR++T  GQR+LD++A +IV
Sbjct:    5 TVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRNLDRIANKIV 139          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS19_CAEEL (40S ribosomal protein S19 OS=Caenorhabditis elegans GN=rps-19 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.743e-31
Identity = 63/137 (45.99%), Postives = 94/137 (68.61%), Query Frame = 3
Query:   87 MATARTVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKG-GRRITSSGQRDLDQVA 494
            M  A ++KDV  HE  K+ +  LK+SGK+++P W+D+VK    KELAP DPDW+Y RAAS+AR +Y R   G+G+F+++YGG+KR G  P HF  S+G   R  +QQL+ +  ++  P G GR ++  G++DLD++A
Sbjct:    1 MTRATSIKDVDQHEATKSIAHFLKKSGKVKVPEWSDLVKLGVNKELAPVDPDWFYTRAASLARHLYFRPA-GIGAFKKVYGGNKRRGVAPNHFQTSAGNCLRKAVQQLEKIKWVEKHPDGKGRILSKQGRKDLDRIA 136          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS19E_METTH (30S ribosomal protein S19e OS=Methanobacterium thermoautotrophicum GN=rps19e PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.407e-23
Identity = 57/134 (42.54%), Postives = 77/134 (57.46%), Query Frame = 3
Query:  102 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRI 503
            TV DV     +   +  LK   K++ P W + VKT   KE  P +PDW+YVRAA++ R++Y+   +GV S R  YGG K  GSRP  F + SGAI R  LQQL+   +I  E + GR IT  G+  LD+ A  +
Sbjct:    3 TVYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESGLIKRE-ENGRVITPEGRSFLDKAAAEV 135          
The following BLAST results are available for this feature:
BLAST of EY665131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
RS19_PAGMA2.038e-3650.3640S ribosomal protein S19 OS=Pagrus major GN=rps19... [more]
RS19_EMENI4.540e-3653.7940S ribosomal protein S19 OS=Emericella nidulans G... [more]
RS19S_ASCSU1.615e-3347.1440S ribosomal protein S19S OS=Ascaris suum GN=RPS1... [more]
RS19B_YEAST1.367e-3247.7640S ribosomal protein S19-B OS=Saccharomyces cerev... [more]
RS19A_YEAST1.367e-3247.7640S ribosomal protein S19-A OS=Saccharomyces cerev... [more]
RS19_ENTHI5.194e-3247.0140S ribosomal protein S19 OS=Entamoeba histolytica... [more]
RS19G_ASCSU1.511e-3146.4340S ribosomal protein S19G OS=Ascaris suum GN=RPS1... [more]
RS19B_DROME4.397e-3146.6740S ribosomal protein S19b OS=Drosophila melanogas... [more]
RS19_CAEEL5.743e-3145.9940S ribosomal protein S19 OS=Caenorhabditis elegan... [more]
RS19E_METTH4.407e-2342.5430S ribosomal protein S19e OS=Methanobacterium the... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-D05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665131 ID=EY665131; Name=EY665131; organism=Citrus sinensis; type=EST; length=715bp
CCACGCGTCCGGAGAGAGATATAAGCAATTCCACCACCTTCTTGCAAAAG
CGAAGCTTTGAGTCGCTGTCCTGCTCTGTTGTGACCATGGCTACCGCTAG
GACTGTCAAAGATGTGTCTCCTCATGAGTTTGTGAAGGCTTACTCTGCTC
ATCTCAAGCGATCTGGCAAGATGGAACTTCCCCCATGGACTGACATAGTC
AAGACTGCCCAGTTCAAGGAGCTTGCTCCCTATGACCCTGACTGGTACTA
TGTCAGAGCTGCCTCCATGGCAAGGAAAATCTACTTGAGGCAAGGGCTTG
GTGTGGGTTCTTTCAGGAGGATTTATGGTGGAAGTAAGAGGAATGGAAGT
CGTCCACCTCACTTCTGCAAAAGCAGTGGTGCTATTGCTCGCCACATTCT
TCAACAGTTGCAGAACATGAACATTATAGATATTGAGCCCAAGGGTGGAA
GGAGAATTACTTCCAGTGGCCAACGAGACCTTGACCAAGTTGCCGGAAGG
ATTGTCGTTGCTCCTTGAAGCTGCTTGACGGTGATCTTGTTTGATTTGTT
GCAGGTTTTTGTTAGTTGATGGAATGATGTTGCATTCTTAAGTAAGTTTT
GATTCCAAGCATGGACTTTTTATGATGAACCCAACTTCAGTTTTGTTGCT
TTTAGAATGTTGACATTTATCTGTAGTATTCACTATAAATTCCTGTTATC
CAAAAAAAAAAAAAA
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