CX043449

Overview
NameCX043449
Unique NameCX043449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HS105_RAT (Heat shock protein 105 kDa OS=Rattus norvegicus GN=Hsph1 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.744e-37
Identity = 91/251 (36.25%), Postives = 132/251 (52.59%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAP-AKISTYTIGPFQSTK-SERAKVKVKVRLNMHGIVSIESAXXXXXXXXXXXXXXXXXXXAAKMETDEVPSDTAPPSSSETDVNMQDAXGTADAQGTTDAPG 752
            +L++++ PL   + +T L  E+V  +E+VG ++R+PA+ + +  FFGK+   T+NA E VARGCALQCAILSP FKVREF V ++ PF ISL W   + E +           VF + +  P  K LTF R G F ++  Y+D   +  P AKI  + +    + K  E++KVKVKVR+N HGI +I +A                    + +E D    +  P  SS+ D N+Q     A  Q      G
Sbjct:  313 LLQKIEVPLHLLMEQTHLKTEEVSAIEIVGGATRIPAVKERIARFFGKDVSTTLNADEAVARGCALQCAILSPAFKVREFSVTDAVPFPISLVWNHDSEETEG-------VHEVFSRNHAAPFSKVLTFLRRGPFELEAFYSDPQAVPYPEAKIGRFVVQNVSAQKDGEKSKVKVKVRVNTHGIFTISTA-------SMVEKVPTEEEDGSSVEADMECPNQKPAESSDVDKNIQQDNSEAGTQPQVQTDG 549          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HSP74_CANFA (Heat shock 70 kDa protein 4 OS=Canis familiaris GN=HSPA4 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.011e-36
Identity = 83/192 (43.23%), Postives = 115/192 (59.90%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAP----AKISTYTIGPFQSTKSERAKVKVKVRLNMHGIVSIESA 569
            +L RV+ PL   L +  L  ED++ VE+VG ++R+PA+ + +++FFGKE   T+NA E V RGCALQCAILSP FKVREF + +  P+SISL W   A E  ++         VF K +  P  K LTFYR   FT++  Y+   +L  P    A+     + P   +    +KVKVKVR+N+HGI S+ SA
Sbjct:  313 LLARVEPPLRSVLEQAKLRKEDIYAVEIVGGATRIPAVKEKISKFFGKELSTTLNADEAVTRGCALQCAILSPAFKVREFSITDVVPYSISLRWNSPAEEGSSD-------CEVFTKNHSAPFSKVLTFYRKEPFTLEAYYSSPQDLPYPDPAIAQFLVQKVTP--QSDGSSSKVKVKVRVNVHGIFSVSSA 495          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HS74L_MOUSE (Heat shock 70 kDa protein 4L OS=Mus musculus GN=Hspa4l PE=1 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.321e-36
Identity = 80/190 (42.11%), Postives = 119/190 (62.63%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAP-AKISTYTI-GPFQSTKSERAKVKVKVRLNMHGIVSIESA 569
            +L RV+ PL+  + +  L  ED++ +E+VG ++R+PA+ + +T FF K+   T+NA E VARGCALQCAILSP FKVREF + +  P+S++L WK S  E   E         VF K +P P  K +TF++   F ++  Y ++ E+  P  +I  +TI   F  +  + +KVKVKVR+N+HGI S+ SA
Sbjct:  313 LLARVEPPLKSVMDQANLQREDINSIEIVGGATRIPAVKEQVTRFFLKDISTTLNADEAVARGCALQCAILSPAFKVREFSITDLVPYSVTLRWKTSFEEGTGE-------CEVFSKNHPAPFSKVITFHKKEPFELEAFYTNLHEVPYPDPRIGNFTIQNVFPQSDGDSSKVKVKVRINIHGIFSVASA 495          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HSP97_STRPU (97 kDa heat shock protein OS=Strongylocentrotus purpuratus PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.725e-36
Identity = 85/189 (44.97%), Postives = 118/189 (62.43%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTI-GPFQSTKSERAKVKVKVRLNMHGIVSIESA 569
            +L+RV+ PL+  L +T L  ED+H +E+VG SSR+P+I + + + F KE   T+N  E VARGCALQCAILSPTFKVR+F V +  P+ I L WKG+    + E G    S  V  K +  P  K LTFYR   F +  +YAD +      +I  + I G F +T+ E +K+KVKVR++ HGI ++ SA
Sbjct:  313 LLKRVEVPLKSVLEQTKLKPEDIHSIEIVGGSSRIPSIKETIKKVFKKECSTTLNQDEAVARGCALQCAILSPTFKVRDFTVTDLTPYPIELEWKGT----EGEDG----SMEVSSKNHQAPFSKMLTFYRKAPFELVARYADPNLPIPERRIGRFKINGVFPTTEGESSKIKVKVRVDGHGIFNVASA 493          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HSP88_NEUCR (Heat shock protein Hsp88 OS=Neurospora crassa GN=hsp-88 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.118e-35
Identity = 86/197 (43.65%), Postives = 119/197 (60.41%), Query Frame = 3
Query:    3 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERAK--------VKVKVRLNMHGIVSIESA 569
            P+L +V  PLE+ALA+  L+ +D+ ++EVVG  SRVP++ + +  FFGK+   TMN  E +ARGCA  CAILSP FKVR+FQV +   + I  +W+  A     +  D   S  VF KGN +PS K LTFYR   F ++ +Y +  EL  P K S + IG F S K   A          K+K R+N+HGI+++ESA
Sbjct:  310 PLLAKVHVPLEQALADAKLTKDDIDIIEVVGGGSRVPSVKERIQAFFGKQLSFTMNQDEAIARGCAFSCAILSPVFKVRDFQVQDIINYPIEFTWEKDA-----DIPDEDTSLVVFNKGNVLPSTKILTFYRKQPFDLEARYTNPEEL--PGKTSPF-IGRF-SIKGVHATEGPEDFMICKLKARINIHGILNVESA 497          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HSP7F_SCHPO (Heat shock protein homolog pss1 OS=Schizosaccharomyces pombe GN=pss1 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.118e-35
Identity = 82/192 (42.71%), Postives = 116/192 (60.42%), Query Frame = 3
Query:    3 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAK--ISTYTIGPFQSTK-SERAKVKVKVRLNMHGIVSIESA 569
            P+LER+  P+EKAL   G+  ED++ +E+VG  +RVP + +++  +FGK    T+N  E VARGCAL CAILSP F+VREF V++   + I+ SW     E   E  +   S  VF +GNPIPS K LTFYR   F +   Y+  ++L    K  I+ Y I      K  + + VK+KVRL++HGI+ +E A
Sbjct:  314 PLLERLTPPIEKALELAGIKKEDLYSIEMVGGCTRVPIVKEVIANYFGKGLSFTLNQDEAVARGCALSCAILSPVFRVREFHVHDVTTYPITFSW-----EPIPENPEEDSSLEVFSEGNPIPSTKILTFYRKAPFKLLAAYSKEAQLPGSIKQNIAQYLINDVVPNKDGDLSIVKIKVRLDLHGILVVEQA 500          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HSP97_STRFN (97 kDa heat shock protein OS=Strongylocentrotus franciscanus GN=HSP110 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.460e-35
Identity = 83/189 (43.92%), Postives = 116/189 (61.38%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTI-GPFQSTKSERAKVKVKVRLNMHGIVSIESA 569
            +L+RV+ PL+  L +T L  ED+H +E+VG SSR+P+I + + + F KE   T+N  E VARGCALQCAILSPTF+VR+F V +  P+ I L WKG+    + E G    S  V  K +  P  K LTFYR   F +  +YAD +      +I  + I G F + + E +K+KVKVR++ HGI  + SA
Sbjct:  313 LLKRVEVPLKSVLEQTKLKPEDIHSIEIVGGSSRIPSIKETIKKVFKKECSTTLNQDEAVARGCALQCAILSPTFRVRDFTVTDLTPYPIELEWKGT----EGEDG----SMEVSHKNHQAPFSKMLTFYRKEPFELVARYADTNLPLPERRIGRFKINGVFPTAEGESSKIKVKVRVDGHGIFKVSSA 493          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: YLA4_CAEEL (Uncharacterized protein C30C11.4 OS=Caenorhabditis elegans GN=C30C11.4 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.671e-31
Identity = 80/193 (41.45%), Postives = 113/193 (58.55%), Query Frame = 3
Query:    3 PILERVKRPLEKALAETGLSV--EDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSEL-RAPAKISTYTI-GPFQSTKSERAKVKVKVRLNMHGIVSIESA 569
            PI  R+K+ L    A+ G+S+  E++  +E+VG SSR+P I +I+ + FGKEP+ TMN  E VARG A+QCAILSPTF+VREF + ++ P+ I LSW        N TG+N     VF   + +P  K ++  RSG F V+  YA  + +      I ++ + G          KVKVKVR+N  GI +I SA
Sbjct:  314 PIFNRIKQVLINLFAD-GVSIKPEEIDEIEIVGGSSRIPMIREIVKDLFGKEPKTTMNQDEAVARGAAMQCAILSPTFRVREFAIKDTQPYRIRLSW--------NSTGENGGENDVFSPRDEVPFSKLVSLLRSGPFNVEAHYAQPNVVPHNQVHIGSWKVNGARPGADGGNQKVKVKVRVNPDGIFTIASA 497          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HSP7F_YEAST (Heat shock protein homolog SSE1 OS=Saccharomyces cerevisiae GN=SSE1 PE=1 SV=4)

HSP 1 Score: 130.568 bits (327), Expect = 9.169e-30
Identity = 72/192 (37.50%), Postives = 114/192 (59.38%), Query Frame = 3
Query:    3 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSEL--RAPAKISTYTIGPFQSTK-SERAKVKVKVRLNMHGIVSIESA 569
            P+LERV  P+ KALA+  LS E+V  VE++G ++R+P + + ++E FGK    T+N  E +A+G A  CAI SPT +VR F+  +  P+S+S SW     + Q E  D+ +   VFP G+  PS K +T  R+G F++   Y D+++L    P +I+ + I   Q  +  +   VK+K+R +  G+ +IE A
Sbjct:  312 PLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYSVSYSW-----DKQVEDEDHME---VFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPVKLKLRCDPSGLHTIEEA 495          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HSP7F_SACKL (Heat shock protein homolog SSE1 OS=Saccharomyces kluyveri GN=SSE1 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.324e-28
Identity = 72/192 (37.50%), Postives = 114/192 (59.38%), Query Frame = 3
Query:    3 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSEL--RAPAKISTYTIGPFQSTKSERA-KVKVKVRLNMHGIVSIESA 569
            P+L RV  P+ KALA+  L+ E+V  VE+VG ++R+P++   ++E FGK+   T+N  E +A+G A  CAI SPT +VR F+  +  P+S+S SW     + Q E  D+ +   VFP G+  PS K +T  R+G F++  +Y +  EL     A+I+ + I   Q ++ E +  VK+K+R +  G+  IE A
Sbjct:  312 PLLSRVTEPITKALAQANLTPEEVDYVEIVGGTTRIPSLKNAISEAFGKQLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYSVSYSW-----DKQEEDEDHLE---VFPAGSSYPSTKLITLQRTGDFSMQAKYTNKEELPEGTSAEIAKWDITGVQVSEGETSVPVKLKLRCDPSGLHIIEDA 495          
The following BLAST results are available for this feature:
BLAST of CX043449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 261
Match NameE-valueIdentityDescription
HS105_RAT7.744e-3736.25Heat shock protein 105 kDa OS=Rattus norvegicus GN... [more]
HSP74_CANFA1.011e-3643.23Heat shock 70 kDa protein 4 OS=Canis familiaris GN... [more]
HS74L_MOUSE1.321e-3642.11Heat shock 70 kDa protein 4L OS=Mus musculus GN=Hs... [more]
HSP97_STRPU1.725e-3644.9797 kDa heat shock protein OS=Strongylocentrotus pu... [more]
HSP88_NEUCR1.118e-3543.65Heat shock protein Hsp88 OS=Neurospora crassa GN=h... [more]
HSP7F_SCHPO1.118e-3542.71Heat shock protein homolog pss1 OS=Schizosaccharom... [more]
HSP97_STRFN1.460e-3543.9297 kDa heat shock protein OS=Strongylocentrotus fr... [more]
YLA4_CAEEL1.671e-3141.45Uncharacterized protein C30C11.4 OS=Caenorhabditis... [more]
HSP7F_YEAST9.169e-3037.50Heat shock protein homolog SSE1 OS=Saccharomyces c... [more]
HSP7F_SACKL1.324e-2837.50Heat shock protein homolog SSE1 OS=Saccharomyces k... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11B05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11B05-C9-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043449 ID=CX043449; Name=CX043449; organism=Citrus sinensis; type=EST; length=753bp
CTCCAATCCTGGAACGTGTAAAGAGGCCTTTGGAAAAGGCTCTTGCTGAA
ACCGGGCTTTCAGTTGAGGATGTTCACATGGTTGAGGTTGTTGGCTCTTC
ATCTCGGGTTCCTGCAATAATTAAGATACTCACTGAATTCTTTGGAAAAG
AACCCAGGCGTACAATGAATGCAAGTGAGTGTGTAGCCAGAGGATGCGCT
TTACAATGTGCGATTCTTAGTCCTACTTTCAAAGTGCGGGAGTTTCAGGT
CAATGAGAGTTTCCCATTTTCAATTTCTTTGTCATGGAAAGGCTCTGCTC
CAGAAGCTCAAAATGAAACAGGGGACAATCAGCAAAGCACTACTGTGTTC
CCCAAGGGAAATCCAATACCTAGTGTGAAGGCTCTGACATTTTACAGGTC
AGGTACATTCACTGTTGATGTGCAGTATGCTGATGTGAGTGAATTGCGGG
CACCTGCCAAAATCAGTACTTACACGATCGGTCCTTTCCAATCTACAAAA
AGTGAACGGGCCAAAGTGAAAGTCAAAGTTCGCTTGAATATGCATGGGAT
TGTGTCTATTGAGTCAGCAACACTCTTGGAGGAAGAGGAAGTTGAAGTTC
CAGTTACGAAGGAGCCTGAAAAAGAAGCCGCTAAGATGGAAACTGATGAG
GTTCCCAGTGATACTGCTCCCCCTAGTTCCAGTGAGACTGATGTAAACAT
GCAAGATGCTAANGGTACTGCTGATGCTCAGGGAACCACTGATGCTCCGG
GGG
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