CX043449

Overview
NameCX043449
Unique NameCX043449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_DEIPR (Chaperone protein dnaK (Fragment) OS=Deinococcus proteolyticus GN=dnaK PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 35/117 (29.91%), Postives = 67/117 (57.26%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGS--APEAQNETGDNQQSTTVF 350
            +L+RV++P+E+A+ + G+S  D++ V +VG S+R+PA+ +I+ +  GKEP  ++N  E V  G A+Q  I+     + +  + +  P ++ +  KG   AP     T    + T ++
Sbjct:  295 LLKRVRQPVEQAMRDAGVSSSDLNEVILVGGSTRIPAVKRIVKDLTGKEPNESVNPDEAVGLGAAVQAGIIQGDSNLGDIVLVDVTPLTLGVEVKGGMIAPMITRNTAVPAKKTEIY 411          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_DEIDV (Chaperone protein dnaK OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=dnaK PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 37/117 (31.62%), Postives = 65/117 (55.56%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGS--APEAQNETGDNQQSTTVF 350
            +L RV++P+E+ALA+  LS  D+  V +VG S+R+PA+ +I+ +  GK P  ++N  E VA G A+Q  I+     + +  + +  P ++ +  KG   AP     T    + T ++
Sbjct:  306 LLRRVRKPVEQALADAKLSASDIDEVILVGGSTRIPAVKRIVQDLVGKTPNESVNPDEAVALGAAVQAGIIQGDSALGDIVLVDVTPLTLGVEVKGGMIAPMITRNTTVPAKKTEIY 422          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_MYCPA (Chaperone protein dnaK OS=Mycobacterium paratuberculosis GN=dnaK PE=2 SV=4)

HSP 1 Score: 69.3218 bits (168), Expect = 2.509e-11
Identity = 53/194 (27.32%), Postives = 95/194 (48.97%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF-GKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQ---YADVSELRAPAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSI 560
            +L+R ++P +  +A+ G+SV D+  V +VG S+R+PA+  ++ E   GKEP + +N  E VA G ALQ  +L    +V++  + +  P S+ +  KG               T +  +   IP+ ++ TF  +      VQ   Y    E+ A  K+    +G F+ T    A     +++V   ++ +GIV +
Sbjct:  285 LLDRTRQPFKSVIADAGISVSDIDHVVLVGGSTRMPAVTDLVKELTGGKEPNKGVNPDEVVAVGAALQAGVLKG--EVKDVLLLDVTPLSLGIETKGGV------------MTKLIERNTTIPTKRSETFTTADDNQPSVQIQVYQGEREIAAHNKL----LGSFELTGIPPAPRGVPQIEVTFDIDANGIVHV 460          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_MYCMO (Chaperone protein dnaK OS=Mycoplasma mobile GN=dnaK PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.509e-11
Identity = 43/191 (22.51%), Postives = 90/191 (47.12%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFY----RSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERAKVKVKVRLNMHGIVSIES 566
            ++ER ++P+  AL E  L  ED+H V +VG S+R+PA+ ++L     K+P  ++N  E VA G A+Q A+LS    + +  + +  P ++ +  +G              +T +  +   IP+ K+  F          T++V   +         +  + +G  +       +++V   ++++GI+ + +
Sbjct:  284 LVERTRKPVRDALKEAKLKSEDLHEVLLVGGSTRIPAVQEMLQHELNKKPNHSINPDEVVAIGAAIQGAVLSG--DINDVLLLDVTPLTLGIETQGGI------------ATPLIQRNTTIPTTKSQIFSTAADNQSEVTINVVQGERQMAADNKSLGQFNLGGIEKAPRGTPQIEVSFSIDVNGIIKVSA 460          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_MYCA1 (Chaperone protein dnaK OS=Mycobacterium avium (strain 104) GN=dnaK PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.509e-11
Identity = 53/194 (27.32%), Postives = 95/194 (48.97%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF-GKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQ---YADVSELRAPAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSI 560
            +L+R ++P +  +A+ G+SV D+  V +VG S+R+PA+  ++ E   GKEP + +N  E VA G ALQ  +L    +V++  + +  P S+ +  KG               T +  +   IP+ ++ TF  +      VQ   Y    E+ A  K+    +G F+ T    A     +++V   ++ +GIV +
Sbjct:  285 LLDRTRQPFKSVIADAGISVSDIDHVVLVGGSTRMPAVTDLVKELTGGKEPNKGVNPDEVVAVGAALQAGVLKG--EVKDVLLLDVTPLSLGIETKGGV------------MTKLIERNTTIPTKRSETFTTADDNQPSVQIQVYQGEREIAAHNKL----LGSFELTGIPPAPRGVPQIEVTFDIDANGIVHV 460          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_IDILO (Chaperone protein dnaK OS=Idiomarina loihiensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.509e-11
Identity = 40/129 (31.01%), Postives = 68/129 (52.71%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTF 392
            ++++   PL++ALA+  LSV D+  + +VG  +R+P +   +T+FFGKEPRR +N  E VA G A+Q  +L     V++  + +  P S+ +   G               T +  K   IP+ ++ TF
Sbjct:  312 LIKKSLEPLKQALADADLSVSDIQDIIMVGGQTRMPKVQAAVTDFFGKEPRRDVNPDEAVAVGAAVQAGVLQG--DVKDVLLLDVCPLSLGIETMGGV------------MTKLIEKNTTIPTKESQTF 426          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_PHOLL (Chaperone protein dnaK OS=Photorhabdus luminescens subsp. laumondii GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11
Identity = 46/191 (24.08%), Postives = 87/191 (45.55%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFY----RSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERAKVKVKVRLNMHGIVSIES 566
            +++R   P+  AL + GLSV DV+ V +VG  +R+P + K++ +FFGKEPR+ +N  E VA G A+Q  +L+    V++  + +  P S+ +   G               T++  K   IP+  +  F          T+ V   +         +  + +   Q+      ++ V   ++  GI+ + +
Sbjct:  312 LVKRSMEPVRVALQDAGLSVSDVNDVILVGGQTRMPMVQKVVADFFGKEPRKDVNPDEAVAMGAAVQGGVLAG--DVKDVLLLDVTPLSLGIETMGGV------------MTSLIVKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAGDNKSLGQFNLDGIQAAPRGMPQIDVTFDIDADGILHVSA 488          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_MOOTA (Chaperone protein dnaK OS=Moorella thermoacetica (strain ATCC 39073) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11
Identity = 51/192 (26.56%), Postives = 93/192 (48.44%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++E+   P  +ALA+ GL  +D+  V +VG S+RVP + + + +  G+EP + +N  ECVA G A+Q  +L+   +V++  + +  P S+ +   G               T +  +   IP+ K+  F  +      V+   +   RA A     T+G FQ T    A     +++VK  ++ +GIV + +
Sbjct:  283 LVEKTVGPTRQALADAGLEPKDIDKVLLVGGSTRVPLVQETVRKILGQEPHKGINPDECVALGAAIQGGVLAG--EVKDVLLLDVTPLSLGIETLGGV------------FTKLIERNTTIPTSKSQIFSTAADNQTTVEIHVLQGERAMA-ADNKTLGRFQLTGIPPAPRGVPQIEVKFDIDANGIVHVSA 459          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_LACRJ (Chaperone protein dnaK OS=Lactobacillus reuteri (strain JCM 1112) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11
Identity = 52/194 (26.80%), Postives = 93/194 (47.94%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++ER K+P+  AL +  L+ +D+  V + G S+R+PA+ +++ E  GKEP  ++N  E VA G A+Q  +L  T  V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     ++KV   ++ +GIV++ +
Sbjct:  285 LVERTKQPVLNALKDADLTFDDIDEVILNGGSTRIPAVQEMVKELTGKEPNHSINPDEAVALGAAIQGGVL--TGDVKDVVLLDVTPLSLGIETMGGV------------FTKLIDRNTTIPTSKSQIF---STAADNQPAVDIHVLQGERPMAADNKTLGNFQLTDIPAAPRGVPQIKVTFDIDKNGIVNVSA 461          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_LACRD (Chaperone protein dnaK OS=Lactobacillus reuteri (strain DSM 20016) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11
Identity = 52/194 (26.80%), Postives = 93/194 (47.94%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++ER K+P+  AL +  L+ +D+  V + G S+R+PA+ +++ E  GKEP  ++N  E VA G A+Q  +L  T  V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     ++KV   ++ +GIV++ +
Sbjct:  285 LVERTKQPVLNALKDADLTFDDIDEVILNGGSTRIPAVQEMVKELTGKEPNHSINPDEAVALGAAIQGGVL--TGDVKDVVLLDVTPLSLGIETMGGV------------FTKLIDRNTTIPTSKSQIF---STAADNQPAVDIHVLQGERPMAADNKTLGNFQLTDIPAAPRGVPQIKVTFDIDKNGIVNVSA 461          
The following BLAST results are available for this feature:
BLAST of CX043449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 261
Match NameE-valueIdentityDescription
DNAK_DEIPR1.921e-1129.91Chaperone protein dnaK (Fragment) OS=Deinococcus p... [more]
DNAK_DEIDV1.921e-1131.62Chaperone protein dnaK OS=Deinococcus deserti (str... [more]
DNAK_MYCPA2.509e-1127.32Chaperone protein dnaK OS=Mycobacterium paratuberc... [more]
DNAK_MYCMO2.509e-1122.51Chaperone protein dnaK OS=Mycoplasma mobile GN=dna... [more]
DNAK_MYCA12.509e-1127.32Chaperone protein dnaK OS=Mycobacterium avium (str... [more]
DNAK_IDILO2.509e-1131.01Chaperone protein dnaK OS=Idiomarina loihiensis GN... [more]
DNAK_PHOLL3.276e-1124.08Chaperone protein dnaK OS=Photorhabdus luminescens... [more]
DNAK_MOOTA3.276e-1126.56Chaperone protein dnaK OS=Moorella thermoacetica (... [more]
DNAK_LACRJ3.276e-1126.80Chaperone protein dnaK OS=Lactobacillus reuteri (s... [more]
DNAK_LACRD3.276e-1126.80Chaperone protein dnaK OS=Lactobacillus reuteri (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11B05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11B05-C9-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043449 ID=CX043449; Name=CX043449; organism=Citrus sinensis; type=EST; length=753bp
CTCCAATCCTGGAACGTGTAAAGAGGCCTTTGGAAAAGGCTCTTGCTGAA
ACCGGGCTTTCAGTTGAGGATGTTCACATGGTTGAGGTTGTTGGCTCTTC
ATCTCGGGTTCCTGCAATAATTAAGATACTCACTGAATTCTTTGGAAAAG
AACCCAGGCGTACAATGAATGCAAGTGAGTGTGTAGCCAGAGGATGCGCT
TTACAATGTGCGATTCTTAGTCCTACTTTCAAAGTGCGGGAGTTTCAGGT
CAATGAGAGTTTCCCATTTTCAATTTCTTTGTCATGGAAAGGCTCTGCTC
CAGAAGCTCAAAATGAAACAGGGGACAATCAGCAAAGCACTACTGTGTTC
CCCAAGGGAAATCCAATACCTAGTGTGAAGGCTCTGACATTTTACAGGTC
AGGTACATTCACTGTTGATGTGCAGTATGCTGATGTGAGTGAATTGCGGG
CACCTGCCAAAATCAGTACTTACACGATCGGTCCTTTCCAATCTACAAAA
AGTGAACGGGCCAAAGTGAAAGTCAAAGTTCGCTTGAATATGCATGGGAT
TGTGTCTATTGAGTCAGCAACACTCTTGGAGGAAGAGGAAGTTGAAGTTC
CAGTTACGAAGGAGCCTGAAAAAGAAGCCGCTAAGATGGAAACTGATGAG
GTTCCCAGTGATACTGCTCCCCCTAGTTCCAGTGAGACTGATGTAAACAT
GCAAGATGCTAANGGTACTGCTGATGCTCAGGGAACCACTGATGCTCCGG
GGG
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