CX043449

Overview
NameCX043449
Unique NameCX043449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HSP7F_CANGA (Heat shock protein homolog SSE1 OS=Candida glabrata GN=SSE1 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.121e-27
Identity = 72/192 (37.50%), Postives = 110/192 (57.29%), Query Frame = 3
Query:    3 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSEL--RAPAKISTYTIGPFQSTKSERA-KVKVKVRLNMHGIVSIESA 569
            P+LERV  P+ KALA+ GL+ +DV  VE++G ++R+P +   ++E FGK    T+N  E +A+G A  CAI SPT +VR F+  +   FS+S  W     + Q E  D+ +   VFP  +  PS K +T +RSG F+++  Y +  EL     A I+ + I   Q  + E +  VK+K+R +  G+  IE A
Sbjct:  312 PMLERVTEPVTKALAQAGLTKDDVDFVEIIGGTTRIPTLKNSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHQFSVSYKW-----DKQVEDEDHLE---VFPANSNFPSTKLITLHRSGDFSMEANYTNKEELPPHLDANIAKWDITGVQIPEGETSVPVKLKLRCDPSGLHIIEEA 495          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HSP7F_SACCA (Heat shock protein homolog SSE1 OS=Saccharomyces castellii GN=SSE1 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.259e-27
Identity = 69/192 (35.94%), Postives = 105/192 (54.69%), Query Frame = 3
Query:    3 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSEL--RAPAKISTYTIGPFQSTK-SERAKVKVKVRLNMHGIVSIESA 569
            P+L RV  P+ KALA+  L+VED+  VE++G ++R+P +   ++E F K    T+N  E +A+G A  CAI SPT +VR F+  +  P+S+S SW     E        ++S  VFP G+  PS K +T  R+G F +   Y    +L     A I+ + I   Q  + +E   VKV +R +  G+ +IE A
Sbjct:  312 PLLTRVTEPVTKALAQANLTVEDIDFVEIIGGTTRIPTLKNSISEAFNKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYSVSYSWDKQVEE--------EESMEVFPAGSTFPSTKLITLQRTGDFQMSAYYTTPEQLPKGTKADIAKWEITGLQVPEGAESVPVKVVLRCDPSGLHTIEEA 495          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HSP79_YEAST (Heat shock protein homolog SSE2 OS=Saccharomyces cerevisiae GN=SSE2 PE=1 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 1.049e-25
Identity = 70/195 (35.90%), Postives = 110/195 (56.41%), Query Frame = 3
Query:    3 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERAK------VKVKVRLNMHGIVSIESA 569
            P+L+RV  P+  ALA+  L+V D+  VE++G ++R+P + K +++ FGK    T+N  E VA+G A  CAI SPT +VR F+  +  P+S+S +W        ++  D++    VFP  +  PS K +T +R+G F++   Y   S+L  P   ST TI  +  T  +  K      VKVK+R +  G+  IE+A
Sbjct:  312 PLLKRVTYPITNALAQAKLTVNDIDFVEIIGGTTRIPVLKKSISDVFGKPLSSTLNQDEAVAKGAAFICAIHSPTLRVRPFKFEDIDPYSVSYTW--------DKQVDDEDRLEVFPANSSYPSTKLITLHRTGDFSMKAVYTHPSKL--PKGTST-TIAKWSFTGVKVPKDQDFIPVKVKLRCDPSGLHIIENA 495          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HSP7F_ASHGO (Heat shock protein homolog SSE1 OS=Ashbya gossypii GN=SSE1 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.052e-25
Identity = 65/192 (33.85%), Postives = 108/192 (56.25%), Query Frame = 3
Query:    3 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-KVKVKVRLNMHGIVSIESA 569
            P+L+RV  P+ KALA+  L+ ED+  VE++G ++R+P +   ++  F K    T+N  E +A+G A  CAI SPT KVR F+  +   +S+S  W        ++  +++    VFP G+  PS K +T +R+G FT+  +Y +   L A  P +I+ + I   +  + E +  VK+K+R +  G   IE+A
Sbjct:  312 PLLKRVTEPVTKALAQAKLTPEDIDFVEIIGGTTRIPCLKNAISAAFNKPLSTTLNQDEAIAKGAAFICAIHSPTLKVRPFKFEDIHEYSVSYHW--------DQQVEDEDHLEVFPAGSSYPSTKLITLHRTGDFTMTAKYTNPEVLPAGMPEEIAKWEITGVKVPEGETSVPVKLKLRCDPSGFHIIENA 495          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HSP7F_CANAL (Heat shock protein homolog SSE1 OS=Candida albicans GN=SSE1 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.756e-24
Identity = 64/193 (33.16%), Postives = 105/193 (54.40%), Query Frame = 3
Query:    3 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSG-TFTVDVQYADVSELRAPAK--ISTYTIGPFQSTKSERA-KVKVKVRLNMHGIVSIESA 569
            P+L+R+  P+E AL + G++V+++  +EV+G SSR+PA+   ++E FGK    T+N  E +A+G A  CA  SPT +VR F+  +   +++S  W         E  +      VFPKG   PS K +T +R G +F ++ +Y    EL    +  I+ + I      + E +   K+K+R +  G  +IESA
Sbjct:  312 PLLDRINVPIETALKDAGITVDELDSIEVIGGSSRIPAVKTRISEIFGKPLSFTLNQDEAIAKGNAYICACHSPTVRVRPFKFEDYNQYTVSYFW-------DKEEDEEDDHLEVFPKGGLFPSTKIITLFRKGPSFEIEAKYTKPEELPKGTELHIAKWKISGVVPNEGESSIATKIKLRNDPSGFYTIESA 497          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HSP88_DICDI (Heat shock protein 88 OS=Dictyostelium discoideum GN=hspH PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.193e-15
Identity = 52/185 (28.11%), Postives = 91/185 (49.19%), Query Frame = 3
Query:    9 LERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERAKVKVKVRLNMHGIVSIE 563
            +  +  PL++ L+E  ++ +    +E+ G  +R  ++ K L+E  G++  +T+N+ E V RG ALQCA+LSP F+VR F VN+   + +S+ +K             +Q   +F   + IP+ K L      T     +    S     A +    I  F    + ++ +K KV L++HGI  I+
Sbjct:  311 MNTIVEPLQRLLSELQMTPDQFQSIEITGGGTRSTSLQKKLSEVLGRDLSKTINSEESVCRGAALQCAMLSPVFRVRPFAVNDVASYPVSVHFK--------SVSGVEQKLDLFNLKSAIPTPKPLRISFPVTKAEGFEIVVNSTFGTIATVKVDNIPAF----TNKSSIKAKVWLDIHGIFHID 483          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HYOU1_XENLA (Hypoxia up-regulated protein 1 (Fragment) OS=Xenopus laevis GN=hyou1 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.135e-14
Identity = 46/149 (30.87%), Postives = 74/149 (49.66%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEP-RRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYR-SGTFTVDVQYADVSEL 446
            +  RV  P+++ALA   + +E++  V +VG ++RVP + + L +  GKE   + +NA E  A G   Q A LS  FKV+ F V ++  F I + +     E  +          +F +  P P  K +TF R +  F   + Y D+S L
Sbjct:  343 LFNRVSAPVQQALASAEMKMEEIDQVILVGGATRVPKVQEFLLKVVGKEELSKNINADEAAAMGAVYQAAALSKAFKVKPFIVRDAAIFPIQVEFTREVEEENHSKSLKHNKRILFQRLAPYPQRKVITFNRYTDDFAFSINYGDLSYL 491          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HYOU1_XENTR (Hypoxia up-regulated protein 1 (Fragment) OS=Xenopus tropicalis GN=hyou1 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 9.212e-14
Identity = 45/149 (30.20%), Postives = 74/149 (49.66%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPR-RTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYR-SGTFTVDVQYADVSEL 446
            +  RV  P++ AL+   + +E++  V +VG ++RVP + ++L +  GKE   + +NA E  A G   Q A LS  FKV+ F V ++  F I + +     E  +          +F +  P P  K +TF R +  F   + Y D+S L
Sbjct:  343 LFNRVSAPVQHALSSAEMKMEEIDQVILVGGATRVPKVQELLLKVVGKEELGKNINADEAAAMGAVYQAAALSKAFKVKPFIVRDAAIFPIQVEFTREVEEEDHSKSLKHNKRILFQRLAPYPQRKVITFNRYTDNFAFSINYGDLSYL 491          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HYOU1_CRIGR (Hypoxia up-regulated protein 1 OS=Cricetulus griseus GN=HYOU1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.203e-13
Identity = 55/200 (27.50%), Postives = 94/200 (47.00%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPR-RTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYR-SGTFTVDVQYADV-----SELRAPAKISTYTI---GPFQSTKS----ERAKVKVKVRLNMHGIVSIE 563
            + ERV  P+++AL    +S++++  V +VG ++RVP + ++L +  GKE   + +NA E  A G   Q A LS  FKV+ F V ++  + I + +     E             +F +  P P  K +TF R S  F   + Y D+      +LR     +  T+   G  +S K     E   +K    L+  G++S++
Sbjct:  355 LFERVPGPVQQALQSAEMSLDEIEQVILVGGATRVPKVQEVLLKAVGKEELGKNINADEAAAMGAVYQAAALSKAFKVKPFVVRDAVIYPILVEFTREVEEEPGVRSLKHNKRVLFSRMGPYPQGKVITFNRYSHDFNFHINYGDLGFLGPEDLRVFGSQNLTTVKLKGVGESLKKYPDYESKGIKAHFNLDESGVLSLD 554          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HYOU1_CHICK (Hypoxia up-regulated protein 1 OS=Gallus gallus GN=HYOU1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.571e-13
Identity = 54/200 (27.00%), Postives = 96/200 (48.00%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPR-RTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYR-SGTFTVDVQYADVS-----ELRAPAKISTYTI---GPFQSTKS----ERAKVKVKVRLNMHGIVSIE 563
            + +RV  P+++AL+   ++++ +  V +VG ++RVP + ++L +  GKE   + +NA E  A G   Q A LS  FKV+ F V ++  F I + +     E             +F +  P P  K +TF R +  F   V Y D+S     +LR    ++  T+   G  +S K     E   +K    ++  G++S++
Sbjct:  347 LFQRVPGPVQQALSSAEMNLDGIDQVILVGGATRVPKVQEVLLKAVGKEELGKNINADEAAAMGAVYQAAALSKAFKVKPFMVRDAAMFPIQVEFTREVEEDDKSKSLKHNKRILFQRMAPYPQRKVITFNRYTDDFEFYVNYGDLSFLNQDDLRIFGSLNLTTVRLKGVGESFKKHSDYESKGIKAHFNMDESGVLSLD 546          
The following BLAST results are available for this feature:
BLAST of CX043449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 261
Match NameE-valueIdentityDescription
HSP7F_CANGA1.121e-2737.50Heat shock protein homolog SSE1 OS=Candida glabrat... [more]
HSP7F_SACCA4.259e-2735.94Heat shock protein homolog SSE1 OS=Saccharomyces c... [more]
HSP79_YEAST1.049e-2535.90Heat shock protein homolog SSE2 OS=Saccharomyces c... [more]
HSP7F_ASHGO3.052e-2533.85Heat shock protein homolog SSE1 OS=Ashbya gossypii... [more]
HSP7F_CANAL5.756e-2433.16Heat shock protein homolog SSE1 OS=Candida albican... [more]
HSP88_DICDI2.193e-1528.11Heat shock protein 88 OS=Dictyostelium discoideum ... [more]
HYOU1_XENLA4.135e-1430.87Hypoxia up-regulated protein 1 (Fragment) OS=Xenop... [more]
HYOU1_XENTR9.212e-1430.20Hypoxia up-regulated protein 1 (Fragment) OS=Xenop... [more]
HYOU1_CRIGR1.203e-1327.50Hypoxia up-regulated protein 1 OS=Cricetulus grise... [more]
HYOU1_CHICK1.571e-1327.00Hypoxia up-regulated protein 1 OS=Gallus gallus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11B05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11B05-C9-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043449 ID=CX043449; Name=CX043449; organism=Citrus sinensis; type=EST; length=753bp
CTCCAATCCTGGAACGTGTAAAGAGGCCTTTGGAAAAGGCTCTTGCTGAA
ACCGGGCTTTCAGTTGAGGATGTTCACATGGTTGAGGTTGTTGGCTCTTC
ATCTCGGGTTCCTGCAATAATTAAGATACTCACTGAATTCTTTGGAAAAG
AACCCAGGCGTACAATGAATGCAAGTGAGTGTGTAGCCAGAGGATGCGCT
TTACAATGTGCGATTCTTAGTCCTACTTTCAAAGTGCGGGAGTTTCAGGT
CAATGAGAGTTTCCCATTTTCAATTTCTTTGTCATGGAAAGGCTCTGCTC
CAGAAGCTCAAAATGAAACAGGGGACAATCAGCAAAGCACTACTGTGTTC
CCCAAGGGAAATCCAATACCTAGTGTGAAGGCTCTGACATTTTACAGGTC
AGGTACATTCACTGTTGATGTGCAGTATGCTGATGTGAGTGAATTGCGGG
CACCTGCCAAAATCAGTACTTACACGATCGGTCCTTTCCAATCTACAAAA
AGTGAACGGGCCAAAGTGAAAGTCAAAGTTCGCTTGAATATGCATGGGAT
TGTGTCTATTGAGTCAGCAACACTCTTGGAGGAAGAGGAAGTTGAAGTTC
CAGTTACGAAGGAGCCTGAAAAAGAAGCCGCTAAGATGGAAACTGATGAG
GTTCCCAGTGATACTGCTCCCCCTAGTTCCAGTGAGACTGATGTAAACAT
GCAAGATGCTAANGGTACTGCTGATGCTCAGGGAACCACTGATGCTCCGG
GGG
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