CX043449

Overview
NameCX043449
Unique NameCX043449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_CITK8 (Chaperone protein dnaK OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11
Identity = 38/101 (37.62%), Postives = 59/101 (58.42%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEA 308
            ++ R   PL+ AL + GLSV D++ V +VG  +R+P + K + EFFGKEPR+ +N  E VA G A+Q  +L  T  V++  + +  P S+ +   G    A
Sbjct:  312 LVNRSIEPLKVALQDAGLSVSDINDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVL--TGDVKDVLLLDVTPLSLGIETMGGVMTA 410          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_BORRA (Chaperone protein dnaK OS=Borrelia recurrentis (strain A1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11
Identity = 40/129 (31.01%), Postives = 67/129 (51.94%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTF 392
            ++++ K P  KA+ + GL   D++ V +VG S+R+PAI KI+ E FG+EP + +N  E VA G A+Q  IL  T + ++  + +  P S+ +   G               T +  +   IP+ K+  F
Sbjct:  307 LVQKTKEPCLKAIKDAGLKASDINEVILVGGSTRIPAIQKIVKEIFGQEPNKGVNPDEAVAIGAAIQGGIL--TGEAKDMVLLDVTPLSLGIETLGGV------------MTKLIERNTTIPTKKSQVF 421          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_BORDL (Chaperone protein dnaK OS=Borrelia duttonii (strain Ly) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11
Identity = 40/129 (31.01%), Postives = 67/129 (51.94%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTF 392
            ++++ K P  KA+ + GL   D++ V +VG S+R+PAI KI+ E FG+EP + +N  E VA G A+Q  IL  T + ++  + +  P S+ +   G               T +  +   IP+ K+  F
Sbjct:  307 LVQKTKEPCLKAIKDAGLKASDINEVILVGGSTRIPAIQKIVKEIFGQEPNKGVNPDEAVAIGAAIQGGIL--TGEAKDMVLLDVTPLSLGIETLGGV------------MTKLIERNTTIPTKKSQVF 421          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_BACFR (Chaperone protein dnaK OS=Bacteroides fragilis GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11
Identity = 51/192 (26.56%), Postives = 91/192 (47.40%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERAK-----VKVKVRLNMHGIVSIES 566
            +++    P +KA+ + GLS  D+  V +VG SSR+PA+ K++ +FFGK P + +N  E VA G A+Q A+L  T +++   + +  P S+ +   G               T +      IP+ K+ TF  +     +V    V +   P      +IG F  T    A+     ++V   ++ +GI+ + +
Sbjct:  306 LIQACLEPCKKAMQDAGLSNSDIDEVILVGGSSRIPAVQKLVEDFFGKTPSKGVNPDEVVAVGAAVQGAVL--TDEIKGVVLLDVTPLSMGIETLGGV------------MTKLIDANTTIPARKSETFSTAADNQTEVT-IHVLQGERPMAAQNKSIGQFNLTGIAPARRGVPQIEVTFDIDANGILKVSA 482          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_BACFN (Chaperone protein dnaK OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11
Identity = 51/192 (26.56%), Postives = 91/192 (47.40%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERAK-----VKVKVRLNMHGIVSIES 566
            +++    P +KA+ + GLS  D+  V +VG SSR+PA+ K++ +FFGK P + +N  E VA G A+Q A+L  T +++   + +  P S+ +   G               T +      IP+ K+ TF  +     +V    V +   P      +IG F  T    A+     ++V   ++ +GI+ + +
Sbjct:  306 LIQACLEPCKKAMQDAGLSNSDIDEVILVGGSSRIPAVQKLVEDFFGKTPSKGVNPDEVVAVGAAVQGAVL--TDEIKGVVLLDVTPLSMGIETLGGV------------MTKLIDANTTIPARKSETFSTAADNQTEVT-IHVLQGERPMAAQNKSIGQFNLTGIAPARRGVPQIEVTFDIDANGILKVSA 482          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_VIBCM (Chaperone protein dnaK OS=Vibrio cholerae serotype O1 (strain M66-2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 41/121 (33.88%), Postives = 69/121 (57.02%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPI 368
            +++R   PL+ ALA+  LSV D+  V +VG  +R+P + K + EFFGKEPR+ +N  E VA G A+Q  +L+   +V++  + +  P S+ +   G        T   +++TT+  K N +
Sbjct:  311 LVQRSLEPLKVALADADLSVNDITDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAVGAAVQGGVLAG--EVKDVLLLDVTPLSLGIETMGGV-----MTKLIEKNTTIPTKANQV 424          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_VIBCH (Chaperone protein dnaK OS=Vibrio cholerae GN=dnaK PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 41/121 (33.88%), Postives = 69/121 (57.02%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPI 368
            +++R   PL+ ALA+  LSV D+  V +VG  +R+P + K + EFFGKEPR+ +N  E VA G A+Q  +L+   +V++  + +  P S+ +   G        T   +++TT+  K N +
Sbjct:  311 LVQRSLEPLKVALADADLSVNDITDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAVGAAVQGGVLAG--EVKDVLLLDVTPLSLGIETMGGV-----MTKLIEKNTTIPTKANQV 424          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_VIBC3 (Chaperone protein dnaK OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 41/121 (33.88%), Postives = 69/121 (57.02%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPI 368
            +++R   PL+ ALA+  LSV D+  V +VG  +R+P + K + EFFGKEPR+ +N  E VA G A+Q  +L+   +V++  + +  P S+ +   G        T   +++TT+  K N +
Sbjct:  311 LVQRSLEPLKVALADADLSVNDITDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAVGAAVQGGVLAG--EVKDVLLLDVTPLSLGIETMGGV-----MTKLIEKNTTIPTKANQV 424          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_THEM4 (Chaperone protein dnaK OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 49/194 (25.26%), Postives = 91/194 (46.91%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILS--PTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++E  ++P+E+AL++  L  ED+  + +VG  +RVP I   + E FGKEP + +N  E VA G A+Q AIL+     + ++  + +  P ++ +  KG   E             + P+ + IP  K+  F  +     +V+   V +   P       +G F+      A     +++V   ++  GIV + +
Sbjct:  289 LVEMTRKPIEQALSDAKLKPEDIDEIILVGGMTRVPMIQNFIKEIFGKEPNKRVNPDEAVAMGAAIQAAILAGEEGAQGKDIVLVDVTPLTLGIEVKGGLFE------------PIIPRNSTIPIKKSKVFTTAEDGQTEVEIR-VFQGERPIAADNILLGSFRLVGIPPAPRGVPQIEVTFDIDSDGIVHVSA 469          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_THEAB (Chaperone protein dnaK OS=Thermosipho africanus (strain TCF52B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 49/194 (25.26%), Postives = 92/194 (47.42%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILS--PTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++E  ++P+E+AL++  L  ED+  + +VG  +RVP + K + E FGK+P R +N  E VA G A+Q AIL+     + ++  + +  P ++ +  KG   E             + P+ + IP  K+  F  +     +V+   V +   P       +G F+      A     +++V   ++  GIV + +
Sbjct:  289 LVEMTRKPVEQALSDAKLKPEDIDEIILVGGMTRVPMVQKFIKEIFGKDPNRGVNPDEAVAVGAAIQAAILAGEEGAQGKDIVLVDVTPLTLGIEVKGGLFE------------PIIPRNSTIPIKKSKVFTTAEDGQTEVE-VRVYQGERPIAADNILLGSFRLVGIPPAPRGVPQIEVTFDIDSDGIVHVSA 469          
The following BLAST results are available for this feature:
BLAST of CX043449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 261
Match NameE-valueIdentityDescription
DNAK_CITK85.588e-1137.62Chaperone protein dnaK OS=Citrobacter koseri (stra... [more]
DNAK_BORRA5.588e-1131.01Chaperone protein dnaK OS=Borrelia recurrentis (st... [more]
DNAK_BORDL5.588e-1131.01Chaperone protein dnaK OS=Borrelia duttonii (strai... [more]
DNAK_BACFR5.588e-1126.56Chaperone protein dnaK OS=Bacteroides fragilis GN=... [more]
DNAK_BACFN5.588e-1126.56Chaperone protein dnaK OS=Bacteroides fragilis (st... [more]
DNAK_VIBCM7.299e-1133.88Chaperone protein dnaK OS=Vibrio cholerae serotype... [more]
DNAK_VIBCH7.299e-1133.88Chaperone protein dnaK OS=Vibrio cholerae GN=dnaK ... [more]
DNAK_VIBC37.299e-1133.88Chaperone protein dnaK OS=Vibrio cholerae serotype... [more]
DNAK_THEM47.299e-1125.26Chaperone protein dnaK OS=Thermosipho melanesiensi... [more]
DNAK_THEAB7.299e-1125.26Chaperone protein dnaK OS=Thermosipho africanus (s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_11B05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11B05-C9-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043449 ID=CX043449; Name=CX043449; organism=Citrus sinensis; type=EST; length=753bp
CTCCAATCCTGGAACGTGTAAAGAGGCCTTTGGAAAAGGCTCTTGCTGAA
ACCGGGCTTTCAGTTGAGGATGTTCACATGGTTGAGGTTGTTGGCTCTTC
ATCTCGGGTTCCTGCAATAATTAAGATACTCACTGAATTCTTTGGAAAAG
AACCCAGGCGTACAATGAATGCAAGTGAGTGTGTAGCCAGAGGATGCGCT
TTACAATGTGCGATTCTTAGTCCTACTTTCAAAGTGCGGGAGTTTCAGGT
CAATGAGAGTTTCCCATTTTCAATTTCTTTGTCATGGAAAGGCTCTGCTC
CAGAAGCTCAAAATGAAACAGGGGACAATCAGCAAAGCACTACTGTGTTC
CCCAAGGGAAATCCAATACCTAGTGTGAAGGCTCTGACATTTTACAGGTC
AGGTACATTCACTGTTGATGTGCAGTATGCTGATGTGAGTGAATTGCGGG
CACCTGCCAAAATCAGTACTTACACGATCGGTCCTTTCCAATCTACAAAA
AGTGAACGGGCCAAAGTGAAAGTCAAAGTTCGCTTGAATATGCATGGGAT
TGTGTCTATTGAGTCAGCAACACTCTTGGAGGAAGAGGAAGTTGAAGTTC
CAGTTACGAAGGAGCCTGAAAAAGAAGCCGCTAAGATGGAAACTGATGAG
GTTCCCAGTGATACTGCTCCCCCTAGTTCCAGTGAGACTGATGTAAACAT
GCAAGATGCTAANGGTACTGCTGATGCTCAGGGAACCACTGATGCTCCGG
GGG
back to top