CX043449

Overview
NameCX043449
Unique NameCX043449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HYOU1_DANRE (Hypoxia up-regulated protein 1 OS=Danio rerio GN=hyou1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13
Identity = 46/149 (30.87%), Postives = 74/149 (49.66%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEP-RRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYR-SGTFTVDVQYADVSEL 446
            + +RV  P+++ALA   +S++++  V +VG ++RVP +  +L +  GKE   + +NA E  A G   Q A LS  FKV+ F V ++  F I + +     E             +F +  P P  K +TF R    F   + Y D+S L
Sbjct:  345 LFDRVPGPVKQALAAAEMSMDEIEQVILVGGATRVPKVQDVLLKSVGKEELSKNINADEAAAMGAVYQAAALSKAFKVKPFLVRDAAVFPIQVEFSRETEEEDGVKSLKHNKRILFQRMAPYPQRKVITFNRYIDDFVFYINYGDLSFL 493          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_MESFL (Chaperone protein dnaK OS=Mesoplasma florum GN=dnaK PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13
Identity = 57/193 (29.53%), Postives = 98/193 (50.78%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYA-DVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSI 560
            ++ER  +P++ AL    LS  D+  V +VG S+R+PA+ KI+ E  GKEP R++N  E VA G A+Q  +L+    V +  + +  P S+ +   G               T +  +   IP+ K+  F    +  VD Q A D++ L+   P      ++G FQ T  + A     +++V  +++++GIVS+
Sbjct:  284 LVERTSKPVKDALQAAKLSASDIDEVLLVGGSTRIPAVQKIVKELLGKEPNRSINPDEVVAMGAAIQGGVLAG--DVTDVLLLDVTPLSLGIETMGGV------------MTKLIDRNTTIPTEKSQIF----STAVDNQPAVDINVLQGERPMAADNKSLGQFQLTGIKPAPKGTPQIEVTFKIDVNGIVSV 458          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HYOU1_HUMAN (Hypoxia up-regulated protein 1 OS=Homo sapiens GN=HYOU1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.680e-13
Identity = 45/149 (30.20%), Postives = 74/149 (49.66%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPR-RTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYR-SGTFTVDVQYADVSEL 446
            + ERV  P+++AL    +S++++  V +VG ++RVP + ++L +  GKE   + +NA E  A G   Q A LS  FKV+ F V ++  + I + +     E             +F +  P P  K +TF R S  F   + Y D+  L
Sbjct:  355 LFERVPGPVQQALQSAEMSLDEIEQVILVGGATRVPRVQEVLLKAVGKEELGKNINADEAAAMGAVYQAAALSKAFKVKPFVVRDAVVYPILVEFTREVEEEPGIHSLKHNKRVLFSRMGPYPQRKVITFNRYSHDFNFHINYGDLGFL 503          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_STRTD (Chaperone protein dnaK OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=dnaK PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13
Identity = 53/194 (27.32%), Postives = 97/194 (50.00%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++ER K P+ +AL++ GLS+ D+  V +VG S+R+PA+++ +    GKEP +++N  E VA G A+Q  ++S    V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     +++V   ++ +GIVS+++
Sbjct:  282 LVERTKTPVRQALSDAGLSLSDIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVISG--DVKDVVLLDVTPLSLGIETMGGV------------FTKLIERNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGVPQIEVTFDIDKNGIVSVKA 458          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_STRT2 (Chaperone protein dnaK OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=dnaK PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13
Identity = 53/194 (27.32%), Postives = 97/194 (50.00%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++ER K P+ +AL++ GLS+ D+  V +VG S+R+PA+++ +    GKEP +++N  E VA G A+Q  ++S    V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     +++V   ++ +GIVS+++
Sbjct:  282 LVERTKTPVRQALSDAGLSLSDIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVISG--DVKDVVLLDVTPLSLGIETMGGV------------FTKLIERNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGVPQIEVTFDIDKNGIVSVKA 458          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_STRT1 (Chaperone protein dnaK OS=Streptococcus thermophilus (strain CNRZ 1066) GN=dnaK PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13
Identity = 53/194 (27.32%), Postives = 97/194 (50.00%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++ER K P+ +AL++ GLS+ D+  V +VG S+R+PA+++ +    GKEP +++N  E VA G A+Q  ++S    V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     +++V   ++ +GIVS+++
Sbjct:  282 LVERTKTPVRQALSDAGLSLSDIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVISG--DVKDVVLLDVTPLSLGIETMGGV------------FTKLIERNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGVPQIEVTFDIDKNGIVSVKA 458          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_DESDG (Chaperone protein dnaK OS=Desulfovibrio desulfuricans (strain G20) GN=dnaK PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13
Identity = 54/192 (28.12%), Postives = 92/192 (47.92%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++ER   P  KAL++ GLS  +V  V +VG  +R+P + K + +FFGKEP R+MN  E V+ G A+Q  IL+    V++  + +  P S+ +   G               T +  +   IP+ K+ TF  +      V    V +   P      T+G F+ T    A     +++V   ++ +GIV++ +
Sbjct:  306 LVERTIEPCRKALSDAGLSASEVDEVVLVGGMTRMPLVQKKVADFFGKEPNRSMNPDEVVSMGAAIQGGILAG--DVKDVLLLDVTPLSLGIETLGGV------------FTRLIERNTTIPTKKSQTFTTAADNQPSVS-IHVMQGERPMASDNMTLGRFELTGIPAAPRGMPQIEVSFDIDANGIVNVSA 482          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_THET8 (Chaperone protein dnaK OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaK PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13
Identity = 42/130 (32.31%), Postives = 71/130 (54.62%), Query Frame = 3
Query:    3 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTF 392
            P+L+R++ P+E+AL + GL+   +  V +VG ++RVPA+ +++ E  GKEP R++N  E VA G A+Q  +L    +VR+  + +  P S+ +  KG               T + P+   IP+ K   F
Sbjct:  305 PLLKRLRGPVEQALKDAGLTPAQIDEVILVGGATRVPAVQQVVRELLGKEPNRSVNPDEVVAMGAAIQAGVLMG--EVRDVVLLDVTPLSLGVETKGGV------------MTVLIPRNTTIPTRKCEIF 420          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_THET2 (Chaperone protein dnaK OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=dnaK PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13
Identity = 42/130 (32.31%), Postives = 71/130 (54.62%), Query Frame = 3
Query:    3 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTF 392
            P+L+R++ P+E+AL + GL+   +  V +VG ++RVPA+ +++ E  GKEP R++N  E VA G A+Q  +L    +VR+  + +  P S+ +  KG               T + P+   IP+ K   F
Sbjct:  305 PLLKRLRGPVEQALKDAGLTPAQIDEVILVGGATRVPAVQQVVRELLGKEPNRSVNPDEVVAMGAAIQAGVLMG--EVRDVVLLDVTPLSLGVETKGGV------------MTVLIPRNTTIPTRKCEIF 420          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_STRSV (Chaperone protein dnaK OS=Streptococcus sanguinis (strain SK36) GN=dnaK PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13
Identity = 52/194 (26.80%), Postives = 97/194 (50.00%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++ER K P+ +AL++ GLS+ ++  V +VG S+R+PA+++ +    GKEP +++N  E VA G A+Q  ++  T  V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     +++V   ++ +GIVS+++
Sbjct:  282 LVERTKEPVRRALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVI--TGDVKDVVLLDVTPLSLGIETMGGV------------FTKLIDRNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKA 458          
The following BLAST results are available for this feature:
BLAST of CX043449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 261
Match NameE-valueIdentityDescription
HYOU1_DANRE2.052e-1330.87Hypoxia up-regulated protein 1 OS=Danio rerio GN=h... [more]
DNAK_MESFL2.052e-1329.53Chaperone protein dnaK OS=Mesoplasma florum GN=dna... [more]
HYOU1_HUMAN2.680e-1330.20Hypoxia up-regulated protein 1 OS=Homo sapiens GN=... [more]
DNAK_STRTD3.500e-1327.32Chaperone protein dnaK OS=Streptococcus thermophil... [more]
DNAK_STRT23.500e-1327.32Chaperone protein dnaK OS=Streptococcus thermophil... [more]
DNAK_STRT13.500e-1327.32Chaperone protein dnaK OS=Streptococcus thermophil... [more]
DNAK_DESDG4.572e-1328.13Chaperone protein dnaK OS=Desulfovibrio desulfuric... [more]
DNAK_THET85.971e-1332.31Chaperone protein dnaK OS=Thermus thermophilus (st... [more]
DNAK_THET25.971e-1332.31Chaperone protein dnaK OS=Thermus thermophilus (st... [more]
DNAK_STRSV5.971e-1326.80Chaperone protein dnaK OS=Streptococcus sanguinis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11B05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11B05-C9-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043449 ID=CX043449; Name=CX043449; organism=Citrus sinensis; type=EST; length=753bp
CTCCAATCCTGGAACGTGTAAAGAGGCCTTTGGAAAAGGCTCTTGCTGAA
ACCGGGCTTTCAGTTGAGGATGTTCACATGGTTGAGGTTGTTGGCTCTTC
ATCTCGGGTTCCTGCAATAATTAAGATACTCACTGAATTCTTTGGAAAAG
AACCCAGGCGTACAATGAATGCAAGTGAGTGTGTAGCCAGAGGATGCGCT
TTACAATGTGCGATTCTTAGTCCTACTTTCAAAGTGCGGGAGTTTCAGGT
CAATGAGAGTTTCCCATTTTCAATTTCTTTGTCATGGAAAGGCTCTGCTC
CAGAAGCTCAAAATGAAACAGGGGACAATCAGCAAAGCACTACTGTGTTC
CCCAAGGGAAATCCAATACCTAGTGTGAAGGCTCTGACATTTTACAGGTC
AGGTACATTCACTGTTGATGTGCAGTATGCTGATGTGAGTGAATTGCGGG
CACCTGCCAAAATCAGTACTTACACGATCGGTCCTTTCCAATCTACAAAA
AGTGAACGGGCCAAAGTGAAAGTCAAAGTTCGCTTGAATATGCATGGGAT
TGTGTCTATTGAGTCAGCAACACTCTTGGAGGAAGAGGAAGTTGAAGTTC
CAGTTACGAAGGAGCCTGAAAAAGAAGCCGCTAAGATGGAAACTGATGAG
GTTCCCAGTGATACTGCTCCCCCTAGTTCCAGTGAGACTGATGTAAACAT
GCAAGATGCTAANGGTACTGCTGATGCTCAGGGAACCACTGATGCTCCGG
GGG
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