CX043449
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HYOU1_DANRE (Hypoxia up-regulated protein 1 OS=Danio rerio GN=hyou1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13 Identity = 46/149 (30.87%), Postives = 74/149 (49.66%), Query Frame = 3 Query: 6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEP-RRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYR-SGTFTVDVQYADVSEL 446 + +RV P+++ALA +S++++ V +VG ++RVP + +L + GKE + +NA E A G Q A LS FKV+ F V ++ F I + + E +F + P P K +TF R F + Y D+S L Sbjct: 345 LFDRVPGPVKQALAAAEMSMDEIEQVILVGGATRVPKVQDVLLKSVGKEELSKNINADEAAAMGAVYQAAALSKAFKVKPFLVRDAAVFPIQVEFSRETEEEDGVKSLKHNKRILFQRMAPYPQRKVITFNRYIDDFVFYINYGDLSFL 493
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_MESFL (Chaperone protein dnaK OS=Mesoplasma florum GN=dnaK PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13 Identity = 57/193 (29.53%), Postives = 98/193 (50.78%), Query Frame = 3 Query: 6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYA-DVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSI 560 ++ER +P++ AL LS D+ V +VG S+R+PA+ KI+ E GKEP R++N E VA G A+Q +L+ V + + + P S+ + G T + + IP+ K+ F + VD Q A D++ L+ P ++G FQ T + A +++V +++++GIVS+ Sbjct: 284 LVERTSKPVKDALQAAKLSASDIDEVLLVGGSTRIPAVQKIVKELLGKEPNRSINPDEVVAMGAAIQGGVLAG--DVTDVLLLDVTPLSLGIETMGGV------------MTKLIDRNTTIPTEKSQIF----STAVDNQPAVDINVLQGERPMAADNKSLGQFQLTGIKPAPKGTPQIEVTFKIDVNGIVSV 458
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HYOU1_HUMAN (Hypoxia up-regulated protein 1 OS=Homo sapiens GN=HYOU1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.680e-13 Identity = 45/149 (30.20%), Postives = 74/149 (49.66%), Query Frame = 3 Query: 6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPR-RTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYR-SGTFTVDVQYADVSEL 446 + ERV P+++AL +S++++ V +VG ++RVP + ++L + GKE + +NA E A G Q A LS FKV+ F V ++ + I + + E +F + P P K +TF R S F + Y D+ L Sbjct: 355 LFERVPGPVQQALQSAEMSLDEIEQVILVGGATRVPRVQEVLLKAVGKEELGKNINADEAAAMGAVYQAAALSKAFKVKPFVVRDAVVYPILVEFTREVEEEPGIHSLKHNKRVLFSRMGPYPQRKVITFNRYSHDFNFHINYGDLGFL 503
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_STRTD (Chaperone protein dnaK OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=dnaK PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13 Identity = 53/194 (27.32%), Postives = 97/194 (50.00%), Query Frame = 3 Query: 6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566 ++ER K P+ +AL++ GLS+ D+ V +VG S+R+PA+++ + GKEP +++N E VA G A+Q ++S V++ + + P S+ + G T + + IP+ K+ F T + D+ L+ P T+G FQ T A +++V ++ +GIVS+++ Sbjct: 282 LVERTKTPVRQALSDAGLSLSDIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVISG--DVKDVVLLDVTPLSLGIETMGGV------------FTKLIERNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGVPQIEVTFDIDKNGIVSVKA 458
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_STRT2 (Chaperone protein dnaK OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=dnaK PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13 Identity = 53/194 (27.32%), Postives = 97/194 (50.00%), Query Frame = 3 Query: 6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566 ++ER K P+ +AL++ GLS+ D+ V +VG S+R+PA+++ + GKEP +++N E VA G A+Q ++S V++ + + P S+ + G T + + IP+ K+ F T + D+ L+ P T+G FQ T A +++V ++ +GIVS+++ Sbjct: 282 LVERTKTPVRQALSDAGLSLSDIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVISG--DVKDVVLLDVTPLSLGIETMGGV------------FTKLIERNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGVPQIEVTFDIDKNGIVSVKA 458
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_STRT1 (Chaperone protein dnaK OS=Streptococcus thermophilus (strain CNRZ 1066) GN=dnaK PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13 Identity = 53/194 (27.32%), Postives = 97/194 (50.00%), Query Frame = 3 Query: 6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566 ++ER K P+ +AL++ GLS+ D+ V +VG S+R+PA+++ + GKEP +++N E VA G A+Q ++S V++ + + P S+ + G T + + IP+ K+ F T + D+ L+ P T+G FQ T A +++V ++ +GIVS+++ Sbjct: 282 LVERTKTPVRQALSDAGLSLSDIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVISG--DVKDVVLLDVTPLSLGIETMGGV------------FTKLIERNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGVPQIEVTFDIDKNGIVSVKA 458
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_DESDG (Chaperone protein dnaK OS=Desulfovibrio desulfuricans (strain G20) GN=dnaK PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13 Identity = 54/192 (28.12%), Postives = 92/192 (47.92%), Query Frame = 3 Query: 6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566 ++ER P KAL++ GLS +V V +VG +R+P + K + +FFGKEP R+MN E V+ G A+Q IL+ V++ + + P S+ + G T + + IP+ K+ TF + V V + P T+G F+ T A +++V ++ +GIV++ + Sbjct: 306 LVERTIEPCRKALSDAGLSASEVDEVVLVGGMTRMPLVQKKVADFFGKEPNRSMNPDEVVSMGAAIQGGILAG--DVKDVLLLDVTPLSLGIETLGGV------------FTRLIERNTTIPTKKSQTFTTAADNQPSVS-IHVMQGERPMASDNMTLGRFELTGIPAAPRGMPQIEVSFDIDANGIVNVSA 482
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_THET8 (Chaperone protein dnaK OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaK PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13 Identity = 42/130 (32.31%), Postives = 71/130 (54.62%), Query Frame = 3 Query: 3 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTF 392 P+L+R++ P+E+AL + GL+ + V +VG ++RVPA+ +++ E GKEP R++N E VA G A+Q +L +VR+ + + P S+ + KG T + P+ IP+ K F Sbjct: 305 PLLKRLRGPVEQALKDAGLTPAQIDEVILVGGATRVPAVQQVVRELLGKEPNRSVNPDEVVAMGAAIQAGVLMG--EVRDVVLLDVTPLSLGVETKGGV------------MTVLIPRNTTIPTRKCEIF 420
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_THET2 (Chaperone protein dnaK OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=dnaK PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13 Identity = 42/130 (32.31%), Postives = 71/130 (54.62%), Query Frame = 3 Query: 3 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTF 392 P+L+R++ P+E+AL + GL+ + V +VG ++RVPA+ +++ E GKEP R++N E VA G A+Q +L +VR+ + + P S+ + KG T + P+ IP+ K F Sbjct: 305 PLLKRLRGPVEQALKDAGLTPAQIDEVILVGGATRVPAVQQVVRELLGKEPNRSVNPDEVVAMGAAIQAGVLMG--EVRDVVLLDVTPLSLGVETKGGV------------MTVLIPRNTTIPTRKCEIF 420
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_STRSV (Chaperone protein dnaK OS=Streptococcus sanguinis (strain SK36) GN=dnaK PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13 Identity = 52/194 (26.80%), Postives = 97/194 (50.00%), Query Frame = 3 Query: 6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566 ++ER K P+ +AL++ GLS+ ++ V +VG S+R+PA+++ + GKEP +++N E VA G A+Q ++ T V++ + + P S+ + G T + + IP+ K+ F T + D+ L+ P T+G FQ T A +++V ++ +GIVS+++ Sbjct: 282 LVERTKEPVRRALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVI--TGDVKDVVLLDVTPLSLGIETMGGV------------FTKLIDRNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKA 458 The following BLAST results are available for this feature:
BLAST of CX043449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 261
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043449 ID=CX043449; Name=CX043449; organism=Citrus sinensis; type=EST; length=753bpback to top |