CX043449

Overview
NameCX043449
Unique NameCX043449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_SHEFN (Chaperone protein dnaK OS=Shewanella frigidimarina (strain NCIMB 400) GN=dnaK PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13
Identity = 48/191 (25.13%), Postives = 90/191 (47.12%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFY----RSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERAKVKVKVRLNMHGIVSIES 566
            +++R   PL+ ALA+  LS+ D++ V +VG  +R+P + + +T FFGKEPR+ +N  E VA G A+Q  +LS   +V++  + +  P S+ +   GS              T +  K   IP+     F          T+ V   +  +  A   +  + +   +     + +V+V   ++  GI+ + +
Sbjct:  311 LIQRTLEPLKVALADADLSISDINEVILVGGQTRMPKVQEAVTNFFGKEPRKDVNPDEAVAVGAAIQAGVLSG--EVKDVLLLDVTPLSLGIETMGSV------------MTKLIEKNTTIPTKAQQVFSTADDNQSAVTIHVLQGERKQASANKSLGQFNLEGIEPAPRGQPQVEVMFDIDADGILHVSA 487          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_EHRSE (Chaperone protein dnaK OS=Ehrlichia sennetsu GN=dnaK PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13
Identity = 47/191 (24.61%), Postives = 91/191 (47.64%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFY----RSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERAKVKVKVRLNMHGIVSIES 566
            +++R   P +KAL ++GL  E+++ V +VG  +R+PA++K +TEFFGKEP + +N  E VA G A+Q  IL+     ++  + +  P S+ +   G               T +  +   IP+ ++ TF          T+ V   +         +  +++G          +++V   ++ +GIV + +
Sbjct:  306 LIDRTIEPCKKALKDSGLKREEINEVVLVGGMTRMPAVVKKVTEFFGKEPHKGVNPDEVVAIGAAIQANILAGGSDAQDIVLLDVTPLSLGIETLGGV------------FTKLIDRNTTIPTKRSQTFSTAEDNQSAVTIRVFQGERQMASDNKLLGQFSLGGIPPAPRGMPQIEVTFDIDANGIVHVSA 484          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_DESRM (Chaperone protein dnaK OS=Desulfotomaculum reducens (strain MI-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13
Identity = 51/192 (26.56%), Postives = 97/192 (50.52%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++E+   P  +ALA++GL   +++ V +VG S+R+PA+ + + +F GKEP + +N  ECVA G A+Q  +L+   +V++  + +  P S+ +   G               T +  +   IP+ K+  F  +      V+   +   R  A     T+G FQ +    A     +++VK  ++++GIVS+ +
Sbjct:  283 LVEKTMGPTRQALADSGLETNEINKVLMVGGSTRIPAVQEAVRKFLGKEPHKGINPDECVALGAAIQAGVLAG--EVKDVLLLDVTPLSLGIETLGGV------------FTKLIDRNTTIPTSKSQIFSTAADNQPSVEIHVLQGERQMA-ADNKTLGRFQLSGIPPAPRGVPQIEVKFDIDVNGIVSVSA 459          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_CLOB8 (Chaperone protein dnaK OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=dnaK PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13
Identity = 48/191 (25.13%), Postives = 92/191 (48.17%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPA----KISTYTIGPFQSTKSERAKVKVKVRLNMHGIVSIES 566
            ++ER   P+ KALA+  LS+ D+  + +VG S+R+PA+++ +  F GKEP + +N  ECVA G A+Q  +L  T +V++  + +  P ++ +   G              +T +  +   IP+ K+  F  +      V+   V   R  A     +  +T+           +++V   ++ +GIV + +
Sbjct:  284 LVERSIEPMRKALADAKLSLNDIDKIILVGGSTRIPAVVEAVKNFTGKEPSKGVNPDECVAVGAAIQAGVL--TGEVKDVVLLDVTPLTLGIETAGGI------------ATPLIERNTTIPTKKSQVFSTAADNQTSVEINVVQGERQMAMDNKSLGQFTLSGIAPAPRGIPQIEVTFDIDANGIVKVSA 460          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: HYOU1_MOUSE (Hypoxia up-regulated protein 1 OS=Mus musculus GN=Hyou1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13
Identity = 54/200 (27.00%), Postives = 93/200 (46.50%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPR-RTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYR-SGTFTVDVQYADV-----SELRAPAKISTYTI---GPFQSTKS----ERAKVKVKVRLNMHGIVSIE 563
            + +RV  P+++AL    +S++ +  V +VG ++RVP + ++L +  GKE   + +NA E  A G   Q A LS  FKV+ F V ++  + I + +     E             +F +  P P  K +TF R S  F   + Y D+      +LR     +  T+   G  +S K     E   +K    L+  G++S++
Sbjct:  355 LFDRVPGPVQQALQSAEMSLDQIEQVILVGGATRVPKVQEVLLKAVGKEELGKNINADEAAAMGAVYQAAALSKAFKVKPFVVRDAVIYPILVEFTREVEEEPGLRSLKHNKRVLFSRMGPYPQRKVITFNRYSHDFNFHINYGDLGFLGPEDLRVFGSQNLTTVKLKGVGESFKKYPDYESKGIKAHFNLDESGVLSLD 554          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_PSEA6 (Chaperone protein dnaK OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=dnaK PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13
Identity = 48/184 (26.09%), Postives = 88/184 (47.83%), Query Frame = 3
Query:   27 PLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFY----RSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERAKVKVKVRLNMHGIVSIES 566
            PL++ALA+  LSV D++ + +VG  +R+P + K +TEFFGKEPR+ +N  E VA G A+Q  +LS    V++  + +  P S+ +   G               T +  K   +P+ K+ TF          TV V   +  +      +  + +   +  +    +++V   ++  GI+ + +
Sbjct:  319 PLKQALADADLSVGDINDIILVGGQTRMPLVQKYVTEFFGKEPRKDVNPDEAVAVGAAIQGGVLSG--DVKDVLLLDVTPLSLGIETMGGV------------MTALIEKNTTVPTKKSQTFSTAEDNQSAVTVHVLQGERKQAAGNKSLGQFNLEGIRPAQRGAPQIEVTFDIDADGILHVSA 488          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_GLOVI (Chaperone protein dnaK OS=Gloeobacter violaceus GN=dnaK PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13
Identity = 49/189 (25.93%), Postives = 95/189 (50.26%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPA----KISTYTIGPFQSTKSERAKVKVKVRLNMHGIVSI 560
            +L RV++P+E+AL +  LS E++  V +VG S+R+PA+ +++    GK+P +++N  E VA G A+Q  +LS   +VR+  + +  P S+ +   G              +T + P+   IP+ K+ TF  +      V+   +   R+ A     +  + +           +V+V   ++ +GI+S+
Sbjct:  306 LLRRVEKPVEQALRDAKLSKENIDEVVLVGGSTRIPAVQELVKRIIGKDPNQSVNPDEVVAVGAAIQAGVLSG--EVRDVVLLDVTPLSLGVETLGGV------------ATPIIPRNTTIPTRKSETFSTAADGQTSVEIHVIQGERSMAGDNKSLGRFRLDGIPPAPRGVPQVEVTFDIDANGILSV 480          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_CARHZ (Chaperone protein dnaK OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dnaK PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13
Identity = 50/192 (26.04%), Postives = 94/192 (48.96%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++E    P  +ALA+ GL  ED+  + +VG S+R+PA+ + + +FF KEP + +N  ECVA G A+Q A+L+   +V++  + +  P S+ +   G               T +  +   IP+ K+  F  +      V+   V +   P      ++G F  T    A     +++V+  ++++GIV + +
Sbjct:  283 LVEATMGPTRQALADAGLKPEDIDKILLVGGSTRIPAVQEAIRKFFNKEPHKGINPDECVAIGAAIQAAVLAG--EVKDVVLLDVTPLSLGIETLGGV------------FTKLIERNTTIPTSKSQIFTTAADNQTSVE-IHVLQGERPMAADNVSLGRFTLTGIPPAPRGVPQIEVRFDIDVNGIVHVSA 459          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_BDEBA (Chaperone protein dnaK OS=Bdellovibrio bacteriovorus GN=dnaK PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13
Identity = 55/194 (28.35%), Postives = 96/194 (49.48%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKIS--TYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            +++R   P  KALA++GL   ++  V +VG S+R+PAI K + +FFGKEP R++N  E VA G A+Q  +L+    V++  + +  P S+ +   G               TT+  +   IPS K+  F    T   +    D+  L+   K++    T+G F+      A     +V+V   ++ +GI+ + +
Sbjct:  304 LVKRSMEPCRKALADSGLKASEIDEVVLVGGSTRIPAIQKAVKDFFGKEPNRSVNPDEVVAIGAAVQGGVLAG--DVKDVLLLDVTPLSLGIETLGGV------------MTTLIERNTAIPSKKSQVF---STAADNQPAVDIHVLQGERKMAGDNKTLGRFELVGIPPAPRGVPQVEVTFDIDANGILHVSA 480          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_STRPZ (Chaperone protein dnaK OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 52/194 (26.80%), Postives = 97/194 (50.00%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++ER K P+ +AL++ GLS+ ++  V +VG S+R+PA+++ +    GKEP +++N  E VA G A+Q  ++  T  V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     +++V   ++ +GIVS+++
Sbjct:  282 LVERTKTPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVI--TGDVKDVVLLDVTPLSLGIETMGGV------------FTKLIDRNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKA 458          
The following BLAST results are available for this feature:
BLAST of CX043449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 261
Match NameE-valueIdentityDescription
DNAK_SHEFN5.971e-1325.13Chaperone protein dnaK OS=Shewanella frigidimarina... [more]
DNAK_EHRSE5.971e-1324.61Chaperone protein dnaK OS=Ehrlichia sennetsu GN=dn... [more]
DNAK_DESRM5.971e-1326.56Chaperone protein dnaK OS=Desulfotomaculum reducen... [more]
DNAK_CLOB85.971e-1325.13Chaperone protein dnaK OS=Clostridium beijerinckii... [more]
HYOU1_MOUSE7.798e-1327.00Hypoxia up-regulated protein 1 OS=Mus musculus GN=... [more]
DNAK_PSEA67.798e-1326.09Chaperone protein dnaK OS=Pseudoalteromonas atlant... [more]
DNAK_GLOVI7.798e-1325.93Chaperone protein dnaK OS=Gloeobacter violaceus GN... [more]
DNAK_CARHZ7.798e-1326.04Chaperone protein dnaK OS=Carboxydothermus hydroge... [more]
DNAK_BDEBA7.798e-1328.35Chaperone protein dnaK OS=Bdellovibrio bacteriovor... [more]
DNAK_STRPZ1.018e-1226.80Chaperone protein dnaK OS=Streptococcus pyogenes s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11B05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11B05-C9-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043449 ID=CX043449; Name=CX043449; organism=Citrus sinensis; type=EST; length=753bp
CTCCAATCCTGGAACGTGTAAAGAGGCCTTTGGAAAAGGCTCTTGCTGAA
ACCGGGCTTTCAGTTGAGGATGTTCACATGGTTGAGGTTGTTGGCTCTTC
ATCTCGGGTTCCTGCAATAATTAAGATACTCACTGAATTCTTTGGAAAAG
AACCCAGGCGTACAATGAATGCAAGTGAGTGTGTAGCCAGAGGATGCGCT
TTACAATGTGCGATTCTTAGTCCTACTTTCAAAGTGCGGGAGTTTCAGGT
CAATGAGAGTTTCCCATTTTCAATTTCTTTGTCATGGAAAGGCTCTGCTC
CAGAAGCTCAAAATGAAACAGGGGACAATCAGCAAAGCACTACTGTGTTC
CCCAAGGGAAATCCAATACCTAGTGTGAAGGCTCTGACATTTTACAGGTC
AGGTACATTCACTGTTGATGTGCAGTATGCTGATGTGAGTGAATTGCGGG
CACCTGCCAAAATCAGTACTTACACGATCGGTCCTTTCCAATCTACAAAA
AGTGAACGGGCCAAAGTGAAAGTCAAAGTTCGCTTGAATATGCATGGGAT
TGTGTCTATTGAGTCAGCAACACTCTTGGAGGAAGAGGAAGTTGAAGTTC
CAGTTACGAAGGAGCCTGAAAAAGAAGCCGCTAAGATGGAAACTGATGAG
GTTCCCAGTGATACTGCTCCCCCTAGTTCCAGTGAGACTGATGTAAACAT
GCAAGATGCTAANGGTACTGCTGATGCTCAGGGAACCACTGATGCTCCGG
GGG
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