CX043449

Overview
NameCX043449
Unique NameCX043449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_STRAG (Chaperone protein dnaK OS=Streptococcus agalactiae GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 52/194 (26.80%), Postives = 97/194 (50.00%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++ER K P+ +AL++ GLS+ ++  V +VG S+R+PA+++ +    GKEP +++N  E VA G A+Q  ++  T  V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     +++V   ++ +GIVS+++
Sbjct:  282 LVERTKTPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVI--TGDVKDVVLLDVTPLSLGIETMGGV------------FTKLIDRNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKA 458          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_STRA5 (Chaperone protein dnaK OS=Streptococcus agalactiae serotype V GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 52/194 (26.80%), Postives = 97/194 (50.00%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++ER K P+ +AL++ GLS+ ++  V +VG S+R+PA+++ +    GKEP +++N  E VA G A+Q  ++  T  V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     +++V   ++ +GIVS+++
Sbjct:  282 LVERTKTPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVI--TGDVKDVVLLDVTPLSLGIETMGGV------------FTKLIDRNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKA 458          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_STRA3 (Chaperone protein dnaK OS=Streptococcus agalactiae serotype III GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 52/194 (26.80%), Postives = 97/194 (50.00%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++ER K P+ +AL++ GLS+ ++  V +VG S+R+PA+++ +    GKEP +++N  E VA G A+Q  ++  T  V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     +++V   ++ +GIVS+++
Sbjct:  282 LVERTKTPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVI--TGDVKDVVLLDVTPLSLGIETMGGV------------FTKLIDRNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKA 458          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_STRA1 (Chaperone protein dnaK OS=Streptococcus agalactiae serotype Ia GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 52/194 (26.80%), Postives = 97/194 (50.00%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++ER K P+ +AL++ GLS+ ++  V +VG S+R+PA+++ +    GKEP +++N  E VA G A+Q  ++  T  V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     +++V   ++ +GIVS+++
Sbjct:  282 LVERTKTPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVI--TGDVKDVVLLDVTPLSLGIETMGGV------------FTKLIDRNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKA 458          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_CLOK5 (Chaperone protein dnaK OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 47/191 (24.61%), Postives = 93/191 (48.69%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPA----KISTYTIGPFQSTKSERAKVKVKVRLNMHGIVSIES 566
            +++R   P++KAL + GL++ D++ V +VG S+R+PA+ + +  F GKEP + +N  ECVA G A+Q  +L  T  V++  + +  P ++ +   G              +T +  +   IP+ K+  F  +      V+   V   R  A     +  +T+           +++V   ++ +GIV++ +
Sbjct:  284 LVDRTIEPMKKALNDAGLTINDINKVILVGGSTRIPAVQEAVKSFTGKEPSKGVNPDECVAMGAAIQAGVL--TGDVKDVLLLDVTPLTLGIETLGGV------------ATPLIERNTTIPTKKSQVFSTAADGQTSVEIHVVQGERQMAADNKTLGRFTLSGIAPAPRGVPQIEVTFDIDANGIVNVSA 460          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_CLOK1 (Chaperone protein dnaK OS=Clostridium kluyveri (strain NBRC 12016) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 47/191 (24.61%), Postives = 93/191 (48.69%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPA----KISTYTIGPFQSTKSERAKVKVKVRLNMHGIVSIES 566
            +++R   P++KAL + GL++ D++ V +VG S+R+PA+ + +  F GKEP + +N  ECVA G A+Q  +L  T  V++  + +  P ++ +   G              +T +  +   IP+ K+  F  +      V+   V   R  A     +  +T+           +++V   ++ +GIV++ +
Sbjct:  284 LVDRTIEPMKKALNDAGLTINDINKVILVGGSTRIPAVQEAVKSFTGKEPSKGVNPDECVAMGAAIQAGVL--TGDVKDVLLLDVTPLTLGIETLGGV------------ATPLIERNTTIPTKKSQVFSTAADGQTSVEIHVVQGERQMAADNKTLGRFTLSGIAPAPRGVPQIEVTFDIDANGIVNVSA 460          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_APHHA (Chaperone protein dnaK OS=Aphanothece halophytica GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 52/194 (26.80%), Postives = 96/194 (49.48%), Query Frame = 3
Query:    3 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF-GKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            P++E+   PL++A+ ++GLSV+ +  + +VG S+R+P + + L +FF GKEP R++N  E VA G A+Q  +L    +V +  +    P S+ +   G            +  T V  +   IP+ K+  F  +      V+   +   RA A     T+G F  T    A     +++V   ++++GI+ + +
Sbjct:  310 PLVEKTIDPLKQAIEDSGLSVDQIDRILLVGGSTRIPEVQEALKKFFNGKEPDRSINPDEAVALGAAIQGGVLGQEQEVEDLLLLVVIPLSLGIETLG------------EVFTKVIERNTTIPTSKSQVFSTASDGQTSVEIHVLQGERAMAN-DNKTLGKFLLTGIPAAPRGVPQIEVSFDIDVNGILKVSA 490          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_ALTMD (Chaperone protein dnaK OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 50/184 (27.17%), Postives = 88/184 (47.83%), Query Frame = 3
Query:   27 PLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFY----RSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERAKVKVKVRLNMHGIVSIES 566
            PL++ALA++ LSV D++ + +VG  +R+P + K +TEFFGKEPR+ +N  E VA G A+Q  +LS    V++  + +  P S+ +   G               T +  K   IP+ K+ TF          TV V   +  +      +  + +   +       +++V   L+  GI+ + +
Sbjct:  319 PLKQALADSDLSVGDINDIILVGGQTRMPLVQKYVTEFFGKEPRKDVNPDEAVAVGAAIQGGVLSG--DVKDVLLLDVTPLSLGIETMGGV------------MTALIEKNTTIPTKKSQTFSTAEDNQSAVTVHVLQGERKQSSGNKSLGQFNLEGIRPAARGVPQIEVTFDLDADGILHVSA 488          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_ACIC5 (Chaperone protein dnaK OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 51/190 (26.84%), Postives = 95/190 (50.00%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSI 560
            IL+R   P +KA+A+ G+    +  V +VG  +R+P I +I+ + FGKEP R +N  E VA G A+Q  +L+   +V++  + +  P ++S+   G              +T + P+   IP+ K  TF  +G    +V+   V +   P      T+G F+ +    A     +++V   ++ +GI+++
Sbjct:  306 ILQRSIEPCKKAMADAGVDASKIDEVVLVGGQTRMPRIQEIVKQLFGKEPHRGVNPDEVVAIGAAVQAGVLAG--EVKDLLLLDVTPLTLSIETLGGV------------ATPMIPRNTTIPTKKTETFSTAGDSQTEVE-VHVLQGERPMAGQNRTLGKFKLSGIPPAPRGVPQIEVTFDIDANGILNV 480          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_STRU0 (Chaperone protein dnaK OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12
Identity = 52/194 (26.80%), Postives = 97/194 (50.00%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++ER K P+ +AL++ GLS+ ++  V +VG S+R+PA+++ +    GKEP +++N  E VA G A+Q  ++  T  V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     +++V   ++ +GIVS+++
Sbjct:  282 LVERTKVPVRRALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVI--TGDVKDVVLLDVTPLSLGIETMGGV------------FTKLIERNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKA 458          
The following BLAST results are available for this feature:
BLAST of CX043449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 261
Match NameE-valueIdentityDescription
DNAK_STRAG1.018e-1226.80Chaperone protein dnaK OS=Streptococcus agalactiae... [more]
DNAK_STRA51.018e-1226.80Chaperone protein dnaK OS=Streptococcus agalactiae... [more]
DNAK_STRA31.018e-1226.80Chaperone protein dnaK OS=Streptococcus agalactiae... [more]
DNAK_STRA11.018e-1226.80Chaperone protein dnaK OS=Streptococcus agalactiae... [more]
DNAK_CLOK51.018e-1224.61Chaperone protein dnaK OS=Clostridium kluyveri (st... [more]
DNAK_CLOK11.018e-1224.61Chaperone protein dnaK OS=Clostridium kluyveri (st... [more]
DNAK_APHHA1.018e-1226.80Chaperone protein dnaK OS=Aphanothece halophytica ... [more]
DNAK_ALTMD1.018e-1227.17Chaperone protein dnaK OS=Alteromonas macleodii (s... [more]
DNAK_ACIC51.018e-1226.84Chaperone protein dnaK OS=Acidobacterium capsulatu... [more]
DNAK_STRU01.330e-1226.80Chaperone protein dnaK OS=Streptococcus uberis (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11B05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11B05-C9-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043449 ID=CX043449; Name=CX043449; organism=Citrus sinensis; type=EST; length=753bp
CTCCAATCCTGGAACGTGTAAAGAGGCCTTTGGAAAAGGCTCTTGCTGAA
ACCGGGCTTTCAGTTGAGGATGTTCACATGGTTGAGGTTGTTGGCTCTTC
ATCTCGGGTTCCTGCAATAATTAAGATACTCACTGAATTCTTTGGAAAAG
AACCCAGGCGTACAATGAATGCAAGTGAGTGTGTAGCCAGAGGATGCGCT
TTACAATGTGCGATTCTTAGTCCTACTTTCAAAGTGCGGGAGTTTCAGGT
CAATGAGAGTTTCCCATTTTCAATTTCTTTGTCATGGAAAGGCTCTGCTC
CAGAAGCTCAAAATGAAACAGGGGACAATCAGCAAAGCACTACTGTGTTC
CCCAAGGGAAATCCAATACCTAGTGTGAAGGCTCTGACATTTTACAGGTC
AGGTACATTCACTGTTGATGTGCAGTATGCTGATGTGAGTGAATTGCGGG
CACCTGCCAAAATCAGTACTTACACGATCGGTCCTTTCCAATCTACAAAA
AGTGAACGGGCCAAAGTGAAAGTCAAAGTTCGCTTGAATATGCATGGGAT
TGTGTCTATTGAGTCAGCAACACTCTTGGAGGAAGAGGAAGTTGAAGTTC
CAGTTACGAAGGAGCCTGAAAAAGAAGCCGCTAAGATGGAAACTGATGAG
GTTCCCAGTGATACTGCTCCCCCTAGTTCCAGTGAGACTGATGTAAACAT
GCAAGATGCTAANGGTACTGCTGATGCTCAGGGAACCACTGATGCTCCGG
GGG
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