CX043449

Overview
NameCX043449
Unique NameCX043449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_SHEDO (Chaperone protein dnaK OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12
Identity = 48/191 (25.13%), Postives = 90/191 (47.12%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFY----RSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERAKVKVKVRLNMHGIVSIES 566
            +++R   PL+ ALA+  LSV +++ V +VG  +R+P + + +T FFGKEPR+ +N  E VA G A+Q  +LS   +V++  + +  P S+ +   GS              T +  K   IP+     F          T+ V   +  +  A   +  + +   +     + +V+V   ++  GI+ + +
Sbjct:  311 LIQRTLEPLKVALADADLSVSEINEVILVGGQTRMPKVQEAVTNFFGKEPRKDVNPDEAVAVGAAIQAGVLSG--EVKDVLLLDVTPLSLGIETMGSV------------MTKLIDKNTTIPTKAQQVFSTADDNQSAVTIHVLQGERKQASANKSLGQFNLEGIEPAPRGQPQVEVMFDIDADGILHVSA 487          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_LACLS (Chaperone protein dnaK OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12
Identity = 61/248 (24.60%), Postives = 110/248 (44.35%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIESAXXXXXXXXXXXXXXXXXXXAAKMETDEVPSDTAPPSSSETDVNMQDAXGTADA 728
            ++E  ++P+ +AL++ GLS  D+  V +VG S+R+PA+++++     KEP +++N  E VA G A+Q  ++  T  V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     +++V   ++ +GIVS+++                      + E   V    +  S  E D  M+DA   ADA
Sbjct:  282 LVEATRQPVRQALSDAGLSTSDIDEVLLVGGSTRIPAVVELVRHETNKEPNKSVNPDEVVAMGAAIQGGVI--TGDVKDVVLLDVTPLSLGIETMGGV------------FTKLIDRNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKA-----------------KDLGTQKEQTIVIKSNSGLSDEEIDKMMKDAEANADA 495          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_LACLM (Chaperone protein dnaK OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12
Identity = 61/248 (24.60%), Postives = 110/248 (44.35%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIESAXXXXXXXXXXXXXXXXXXXAAKMETDEVPSDTAPPSSSETDVNMQDAXGTADA 728
            ++E  ++P+ +AL++ GLS  D+  V +VG S+R+PA+++++     KEP +++N  E VA G A+Q  ++  T  V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     +++V   ++ +GIVS+++                      + E   V    +  S  E D  M+DA   ADA
Sbjct:  282 LVEATRQPVRQALSDAGLSTSDIDEVLLVGGSTRIPAVVELVRHETNKEPNKSVNPDEVVAMGAAIQGGVI--TGDVKDVVLLDVTPLSLGIETMGGV------------FTKLIDRNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKA-----------------KDLGTQKEQTIVIKSNSGLSDEEIDKMMKDAEANADA 495          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_LACLA (Chaperone protein dnaK OS=Lactococcus lactis subsp. lactis GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12
Identity = 61/248 (24.60%), Postives = 110/248 (44.35%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIESAXXXXXXXXXXXXXXXXXXXAAKMETDEVPSDTAPPSSSETDVNMQDAXGTADA 728
            ++E  ++P+ +AL++ GLS  D+  V +VG S+R+PA+++++     KEP +++N  E VA G A+Q  ++  T  V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     +++V   ++ +GIVS+++                      + E   V    +  S  E D  M+DA   ADA
Sbjct:  282 LVEATRQPVRQALSDAGLSTSDIDEVLLVGGSTRIPAVVELVRHETNKEPNKSVNPDEVVAMGAAIQGGVI--TGDVKDVVLLDVTPLSLGIETMGGV------------FTKLIDRNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKA-----------------KDLGTQKEQTIVIKSNSGLSDEEIDKMMKDAEANADA 495          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_DESVV (Chaperone protein dnaK OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12
Identity = 54/190 (28.42%), Postives = 91/190 (47.89%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSI 560
            ++ER   P  KALA+ GL+   +  V +VG  +R+P + K ++EFFGKEP R++N  E VA G A+Q  IL+    V++  + +  P S+ +   G               T +  +   IP+ K+ TF  +      V    V +   P      T+G F+ T    A     +++V   ++ +GIV++
Sbjct:  307 LVERTVEPCRKALADAGLTAAQIDEVVLVGGMTRMPLVQKRVSEFFGKEPNRSVNPDEVVAMGAAIQGGILAG--DVKDVLLLDVTPLSLGIETLGGV------------FTRLIERNTTIPTRKSQTFTTAADNQPSVS-IHVLQGERPMASDNMTLGRFELTGIPPAMRGVPQIEVSFDIDANGIVNV 481          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_DESVH (Chaperone protein dnaK OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12
Identity = 54/190 (28.42%), Postives = 91/190 (47.89%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSI 560
            ++ER   P  KALA+ GL+   +  V +VG  +R+P + K ++EFFGKEP R++N  E VA G A+Q  IL+    V++  + +  P S+ +   G               T +  +   IP+ K+ TF  +      V    V +   P      T+G F+ T    A     +++V   ++ +GIV++
Sbjct:  307 LVERTVEPCRKALADAGLTAAQIDEVVLVGGMTRMPLVQKRVSEFFGKEPNRSVNPDEVVAMGAAIQGGILAG--DVKDVLLLDVTPLSLGIETLGGV------------FTRLIERNTTIPTRKSQTFTTAADNQPSVS-IHVLQGERPMASDNMTLGRFELTGIPPAMRGVPQIEVSFDIDANGIVNV 481          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_CLOD6 (Chaperone protein dnaK OS=Clostridium difficile (strain 630) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12
Identity = 51/192 (26.56%), Postives = 95/192 (49.48%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRAPAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++E+   P + AL + GLS  D+  V +VG S+R+PA+ + + +F GKEP + +N  ECVA G ++Q  +L+    V++  + +  P S+ +   G+              T +  +   IP+ K+  F  +      V    +   R+ A  +T T+G FQ T    A     +++V   ++ +GIV++ +
Sbjct:  284 LVEKTMEPTKTALQDAGLSTGDIDDVLLVGGSTRIPAVQEAVKKFIGKEPHKGINPDECVAAGASIQAGVLAG--DVKDLLLLDVTPLSLGIETMGNV------------MTKIIERNTTIPTKKSQIFSTAADNQTAVDIHVLQGERSMAYDNT-TLGRFQLTDIPPAQRGIPQIEVTFDIDANGIVNVSA 460          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_STRZT (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.737e-12
Identity = 52/194 (26.80%), Postives = 97/194 (50.00%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++ER K P+ +AL++ GLS+ ++  V +VG S+R+PA+++ +    GKEP +++N  E VA G A+Q  ++  T  V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     +++V   ++ +GIVS+++
Sbjct:  282 LVERTKVPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVI--TGDVKDVVLLDVTPLSLGIETMGGV------------FTKLIDRNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKA 458          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_STRZP (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain P1031) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.737e-12
Identity = 52/194 (26.80%), Postives = 97/194 (50.00%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++ER K P+ +AL++ GLS+ ++  V +VG S+R+PA+++ +    GKEP +++N  E VA G A+Q  ++  T  V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     +++V   ++ +GIVS+++
Sbjct:  282 LVERTKVPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVI--TGDVKDVVLLDVTPLSLGIETMGGV------------FTKLIDRNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKA 458          
BLAST of CX043449 vs. ExPASy Swiss-Prot
Match: DNAK_STRZJ (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain JJA) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.737e-12
Identity = 52/194 (26.80%), Postives = 97/194 (50.00%), Query Frame = 3
Query:    6 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSELRA--PAKISTYTIGPFQSTKSERA-----KVKVKVRLNMHGIVSIES 566
            ++ER K P+ +AL++ GLS+ ++  V +VG S+R+PA+++ +    GKEP +++N  E VA G A+Q  ++  T  V++  + +  P S+ +   G               T +  +   IP+ K+  F    T   +    D+  L+   P      T+G FQ T    A     +++V   ++ +GIVS+++
Sbjct:  282 LVERTKVPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVI--TGDVKDVVLLDVTPLSLGIETMGGV------------FTKLIDRNTTIPTSKSQVF---STAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKA 458          
The following BLAST results are available for this feature:
BLAST of CX043449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 261
Match NameE-valueIdentityDescription
DNAK_SHEDO1.330e-1225.13Chaperone protein dnaK OS=Shewanella denitrificans... [more]
DNAK_LACLS1.330e-1224.60Chaperone protein dnaK OS=Lactococcus lactis subsp... [more]
DNAK_LACLM1.330e-1224.60Chaperone protein dnaK OS=Lactococcus lactis subsp... [more]
DNAK_LACLA1.330e-1224.60Chaperone protein dnaK OS=Lactococcus lactis subsp... [more]
DNAK_DESVV1.330e-1228.42Chaperone protein dnaK OS=Desulfovibrio vulgaris s... [more]
DNAK_DESVH1.330e-1228.42Chaperone protein dnaK OS=Desulfovibrio vulgaris (... [more]
DNAK_CLOD61.330e-1226.56Chaperone protein dnaK OS=Clostridium difficile (s... [more]
DNAK_STRZT1.737e-1226.80Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRZP1.737e-1226.80Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRZJ1.737e-1226.80Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_11B05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11B05-C9-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043449 ID=CX043449; Name=CX043449; organism=Citrus sinensis; type=EST; length=753bp
CTCCAATCCTGGAACGTGTAAAGAGGCCTTTGGAAAAGGCTCTTGCTGAA
ACCGGGCTTTCAGTTGAGGATGTTCACATGGTTGAGGTTGTTGGCTCTTC
ATCTCGGGTTCCTGCAATAATTAAGATACTCACTGAATTCTTTGGAAAAG
AACCCAGGCGTACAATGAATGCAAGTGAGTGTGTAGCCAGAGGATGCGCT
TTACAATGTGCGATTCTTAGTCCTACTTTCAAAGTGCGGGAGTTTCAGGT
CAATGAGAGTTTCCCATTTTCAATTTCTTTGTCATGGAAAGGCTCTGCTC
CAGAAGCTCAAAATGAAACAGGGGACAATCAGCAAAGCACTACTGTGTTC
CCCAAGGGAAATCCAATACCTAGTGTGAAGGCTCTGACATTTTACAGGTC
AGGTACATTCACTGTTGATGTGCAGTATGCTGATGTGAGTGAATTGCGGG
CACCTGCCAAAATCAGTACTTACACGATCGGTCCTTTCCAATCTACAAAA
AGTGAACGGGCCAAAGTGAAAGTCAAAGTTCGCTTGAATATGCATGGGAT
TGTGTCTATTGAGTCAGCAACACTCTTGGAGGAAGAGGAAGTTGAAGTTC
CAGTTACGAAGGAGCCTGAAAAAGAAGCCGCTAAGATGGAAACTGATGAG
GTTCCCAGTGATACTGCTCCCCCTAGTTCCAGTGAGACTGATGTAAACAT
GCAAGATGCTAANGGTACTGCTGATGCTCAGGGAACCACTGATGCTCCGG
GGG
back to top