EY665123

Overview
NameEY665123
Unique NameEY665123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6119 contig Csv1_Contig6119:45..922. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.302e-64
Identity = 113/169 (66.86%), Postives = 145/169 (85.80%), Query Frame = 1
Query:  178 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIK 684
            +PEYD L K+L+IGDSGVGKSC+LLRFAD+ + +SYISTIGVDF IRT+E DGK IKLQIWDTAGQERF+TIT+SYYRGAHG+IIVYD+T  +SFN++K+WL ++DR+AS +V KL+VGNKCDL + + V ++ AK FADE+ IP METSAK+ST + +AF+ +A+ IK
Sbjct:   27 HPEYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKCDLNSKRAVDFKIAKKFADELNIPIMETSAKESTAIDEAFIKLASDIK 195          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.733e-63
Identity = 120/204 (58.82%), Postives = 155/204 (75.98%), Query Frame = 1
Query:  166 STTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKSPFMXNAXPXTVQIKRQPVAXKSGCC 777
            +T     YD+L KLLLIGDSGVGKSCLLLRF+D S+  S+I+TIG+DFKIRT+E +GK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD++SF +++ W+  I+++ASD+VNK+L+GNKCD+T  KVV     K+ ADE GI F+ETSAK+S NV +AF+ +A  IK RM  +P   N    T+ I   P   K+ CC
Sbjct:    5 ATNKPAAYDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKRMIDTP---NDPDHTICI--TPNNKKNTCC 203          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.834e-62
Identity = 121/206 (58.74%), Postives = 151/206 (73.30%), Query Frame = 1
Query:  184 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKSPFMXNAXPXTVQIK-----RQPVAXKSGCCST 783
            +YDYL KLLLIGDSGVGKSCLLLRF+D S+  S+I+TIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+  I+++ASDNVNK+LVGNK D+  +K  V     +A ADE GI F ETSAK + NV + F ++A  IK R+  S     A P ++ IK         A KS CC +
Sbjct:   11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEAQP-SITIKPADQSGNQAAAKSACCGS 215          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.522e-61
Identity = 120/208 (57.69%), Postives = 151/208 (72.60%), Query Frame = 1
Query:  184 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKSPFMXNAXPXTVQIKRQPVA-------XKSGCCST 783
            +YDYL KLLLIGDSGVGKSCLLLRF+D S+  S+I+TIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+  I+++ASDNVNK+LVGNK D+  +K  V     +A ADE GI F ETSAK + NV + F ++   IK R+  +     A P T++I +   A        KS CC T
Sbjct:   11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTD--SRAEPATIKISQTDQAAGAGQATQKSACCGT 216          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.898e-60
Identity = 112/172 (65.12%), Postives = 139/172 (80.81%), Query Frame = 1
Query:  181 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRM 693
            P+YD L KLLL+GDSGVGKSCLLLRF DD +  S+I+TIG+DFKI+ V+ DGK +KLQIWDTAGQERFRTITS+YYRGA GII+VYD+TD+ SFNNV+ W+  I+++ASDNVNK+LVGNK DL  +K VVS    +A ADE G  F ETSAKD+ +V +AF+A+A  +  RM
Sbjct:    8 PDYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGNKLDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARM 179          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 6.397e-60
Identity = 106/166 (63.86%), Postives = 139/166 (83.73%), Query Frame = 1
Query:  187 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIK 684
            YDYL KLLLIGDSGVGKSCLLLRF++DS+  S+I+TIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI+++YDVTD++SF+NV+ W + ++++AS+NV K+L+GNKCD    + VS+E  +A ADE+G+ F+E SAK + NV +AF  +A  IK
Sbjct:    6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIK 171          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.881e-57
Identity = 102/175 (58.29%), Postives = 139/175 (79.43%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGK 699
            M   YDYLFKLLLIGDSGVGK+CLL RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+  I+ +AS +V ++++GNKCD+   + VS E  +  A + GI F+ETSAK STNV +AF  +A  I  ++ +
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNR 175          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.881e-57
Identity = 102/175 (58.29%), Postives = 139/175 (79.43%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGK 699
            M   YDYLFKLLLIGDSGVGK+CLL RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+  I+ +AS +V ++++GNKCD+   + VS E  +  A + GI F+ETSAK STNV +AF  +A  I  ++ +
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNR 175          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB8B_MOUSE (Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.881e-57
Identity = 102/175 (58.29%), Postives = 139/175 (79.43%), Query Frame = 1
Query:  175 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGK 699
            M   YDYLFKLLLIGDSGVGK+CLL RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+  I+ +AS +V ++++GNKCD+   + VS E  +  A + GI F+ETSAK STNV +AF  +A  I  ++ +
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNR 175          
BLAST of EY665123 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.619e-57
Identity = 112/187 (59.89%), Postives = 147/187 (78.61%), Query Frame = 1
Query:  184 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVGQAFMAMAAFIKDRMGKSPFMXNAXPXTVQI 741
            EYDYLFK+++IGDSG GKS LLLRFAD++Y ESY+STIGVDFKI+TV+ D  TIKLQIWDTAGQERFRTITS+YYRGAHGII VYDVT++ SF+++ + WL +ID+YA+ NV KLL+GNK DL  ++VVS + AK  A++  + ++E SAK  +NV +AF  +A  +KD++ + P   NA   TV +
Sbjct:    3 EYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYP--SNAPASTVSL 187          
The following BLAST results are available for this feature:
BLAST of EY665123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB1C_DICDI7.302e-6466.86Ras-related protein Rab-1C OS=Dictyostelium discoi... [more]
RAB8B_DICDI4.733e-6358.82Ras-related protein Rab-8B OS=Dictyostelium discoi... [more]
RB1BV_BETVU6.834e-6258.74Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB... [more]
ARA3_ARATH1.522e-6157.69Ras-related protein ARA-3 OS=Arabidopsis thaliana ... [more]
YPTV2_VOLCA4.898e-6065.12GTP-binding protein yptV2 OS=Volvox carteri GN=YPT... [more]
YPT2_SCHPO6.397e-6063.86GTP-binding protein ypt2 OS=Schizosaccharomyces po... [more]
RAB8B_RAT3.881e-5758.29Ras-related protein Rab-8B OS=Rattus norvegicus GN... [more]
RAB8B_PONAB3.881e-5758.29Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8... [more]
RAB8B_MOUSE3.881e-5758.29Ras-related protein Rab-8B OS=Mus musculus GN=Rab8... [more]
RAB1_THEPA6.619e-5759.89Ras-related protein Rab-1 OS=Theileria parva GN=ra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665123 ID=EY665123; Name=EY665123; organism=Citrus sinensis; type=EST; length=878bp
CCTTTGCTTGTCGTTTCAGTATTTTCTTTCTTTTTTTTCTTTTTTGTCTT
GTCTTCTGTTTTTGTTGACATTTAATTTCCCGGCGAAACTCATATCACGA
GATCTCGCCGAAGATAATAATCTGTTTTGGTTAACCGAACCCGAAGCTTT
TTTCTTTTACACAAATCTACGACGATGAATCCTGAATATGACTATCTGTT
TAAGCTTCTGCTTATTGGAGATTCCGGTGTTGGCAAATCTTGTCTTCTCT
TGAGATTTGCTGATGATTCATATATTGAGAGTTACATCAGCACCATAGGA
GTTGATTTTAAAATACGCACTGTTGAGCAAGATGGGAAGACCATTAAACT
TCAAATTTGGGATACTGCTGGTCAAGAAAGATTTAGGACAATCACCAGCA
GCTACTACCGTGGGGCACATGGTATCATAATTGTTTATGATGTGACAGAC
CAAGAGAGCTTCAATAATGTCAAGCAGTGGTTGAATGAAATTGACCGTTA
TGCTAGTGATAATGTCAACAAACTTCTGGTTGGAAACAAGTGTGATCTCA
CTGCAAATAAGGTTGTCTCGTACGAAACAGCCAAGGCATTTGCAGATGAA
ATTGGAATACCTTTCATGGAAACTAGTGCAAAAGATTCTACCAACGTGGG
ACAGGCATTCATGGCCATGGCTGCTTTCATCAAGGATAGAATGGGCAAGT
CACCATTCATGANCAATGCANGGCCTNCAACTGTACAGATCAAAAGGCAG
CCTGTTGCACANAAAAGTGGCTGCTGCTCTACTAAGTATCATTGGATANT
ATCTGCCNGGGGTCTGCTGGACCCAAGGGGGGGGAATGCTTTTATCTTTT
CAGTTGAAAGCTTTGTATCTGGACCAAC
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