EY665116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 7.856e-42 Identity = 81/86 (94.19%), Postives = 83/86 (96.51%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGEV DPLYP GSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFV AIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 180 PLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 7.856e-42 Identity = 80/86 (93.02%), Postives = 83/86 (96.51%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGEV DPLYP GSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFV AIVTGKGPLENLADHL+DPVNNNAW+YATNFVPGK Sbjct: 183 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 268
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 7.856e-42 Identity = 81/86 (94.19%), Postives = 83/86 (96.51%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGEV DPLYP GSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFV AIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK Sbjct: 182 PLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.026e-41 Identity = 80/86 (93.02%), Postives = 83/86 (96.51%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGEV DPLYP GSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFV A+VTGKGPLENLADHLADPVNNNAW+YATNFVPGK Sbjct: 181 PLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.026e-41 Identity = 81/86 (94.19%), Postives = 83/86 (96.51%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGEV DPLYP GSFDPLGLADDPEAFAEL+VKEIKNGRLAMFSMFGFFV AIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 181 PLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.026e-41 Identity = 80/85 (94.12%), Postives = 82/85 (96.47%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 257 PLGEV DPLYP GSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFV AIVTGKGPLENLADH+ADPVNNNAWAYATNFVPG Sbjct: 177 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPG 261
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.340e-41 Identity = 80/86 (93.02%), Postives = 83/86 (96.51%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGEV DPLYP GSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFV AIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK Sbjct: 182 PLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.340e-41 Identity = 80/86 (93.02%), Postives = 83/86 (96.51%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGEV DPLYP GSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFV AIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK Sbjct: 182 PLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.340e-41 Identity = 81/86 (94.19%), Postives = 82/86 (95.35%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGEV DPLYP GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV AIVTGKGPLENLADHLADPVNNNAW +ATNFVPGK Sbjct: 182 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.750e-41 Identity = 78/86 (90.70%), Postives = 84/86 (97.67%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGEVTDP+YP G+FDPLGLADDP+AFA++KVKEIKNGRLAMFSMFGFFV AIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK Sbjct: 193 PLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278 The following BLAST results are available for this feature:
BLAST of EY665116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665116 ID=EY665116; Name=EY665116; organism=Citrus sinensis; type=EST; length=879bpback to top |