EY665116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.794e-39 Identity = 77/86 (89.53%), Postives = 80/86 (93.02%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGE D LYP GSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFV AIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 182 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.794e-39 Identity = 77/86 (89.53%), Postives = 80/86 (93.02%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGE D LYP GSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFV AIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 182 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.766e-39 Identity = 77/85 (90.59%), Postives = 78/85 (91.76%), Query Frame = 3 Query: 6 LGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 LGEV DPLY GSFDPLGL DDPE FAELKVKEIKNGRLAMFSMFGFFV AIVTGKGP+ENLADHL DPVNNNAWAYATNFVPGK Sbjct: 180 LGEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNNAWAYATNFVPGK 264
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.766e-39 Identity = 76/86 (88.37%), Postives = 79/86 (91.86%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLG V DPLYP GSFDPLGLA+DPEAFAELKVKE KNGRLAMFSMFGFF+ AIVTGKGPLENLADHL DPVNNNAW+YATNFVP K Sbjct: 182 PLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNNAWSYATNFVPRK 267
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 4.766e-39 Identity = 76/86 (88.37%), Postives = 80/86 (93.02%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGE DP+YP G+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFV AIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK Sbjct: 180 PLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVPGK 265
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.387e-38 Identity = 75/86 (87.21%), Postives = 80/86 (93.02%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGE D +YP G+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV AIVTGKGP+ENL+DH+ADPV NNAWAYATNFVPGK Sbjct: 152 PLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFVPGK 237
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.387e-38 Identity = 75/86 (87.21%), Postives = 80/86 (93.02%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGE+ DPLYP GSFDPLGLA+ P+AFAELKVKEIKNGRLAMFSMFGFFV AIVTGKGPLE+LADH+ADPVNNNAW ATNFVPGK Sbjct: 181 PLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFVPGK 266
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 4.035e-38 Identity = 75/86 (87.21%), Postives = 79/86 (91.86%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGE D +YP G+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV AIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK Sbjct: 180 PLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.882e-38 Identity = 74/86 (86.05%), Postives = 79/86 (91.86%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGE D +YP G+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV AIVTGKGP+ENL+DH+ DPV NNAWAYATNFVPGK Sbjct: 180 PLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYATNFVPGK 265
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.988e-38 Identity = 76/86 (88.37%), Postives = 78/86 (90.70%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGE DPLYP +FDPLGLADDPEA AELKVKEIKNGRLAMFSMFGFFV AIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK Sbjct: 65 PLGEGLDPLYPGDAFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 150 The following BLAST results are available for this feature:
BLAST of EY665116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665116 ID=EY665116; Name=EY665116; organism=Citrus sinensis; type=EST; length=879bpback to top |