EY665116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.988e-38 Identity = 76/86 (88.37%), Postives = 77/86 (89.53%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGE D LYP GSFDPL DPEAFAELKVKEIKNGRLAMFSMFGFFV AIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 39 PLGEAEDLLYPGGSFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 124
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.174e-37 Identity = 74/86 (86.05%), Postives = 79/86 (91.86%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGE D +YP G+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV AIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 180 PLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVPGK 265
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.461e-37 Identity = 74/85 (87.06%), Postives = 76/85 (89.41%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 257 PLGEVTDP+YP GSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFV AIVTGKGPLENL DHLADPV NNAWAYA PG Sbjct: 183 PLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSPPG 267
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.461e-37 Identity = 71/86 (82.56%), Postives = 80/86 (93.02%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGE DPLYP G+FDPLGLADDP++FAELKVKE+KNGRLAMFSMFGFFV AIVTGKGP++NL DH+ADPV NNAWA+ATNFVPG+ Sbjct: 180 PLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPGQ 265
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.826e-37 Identity = 72/86 (83.72%), Postives = 78/86 (90.70%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGE D +YP G+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFV AIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK Sbjct: 178 PLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.826e-37 Identity = 72/86 (83.72%), Postives = 78/86 (90.70%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 PLGE D +YP G+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFV AIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK Sbjct: 178 PLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.826e-37 Identity = 75/85 (88.24%), Postives = 77/85 (90.59%), Query Frame = 3 Query: 6 LGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260 LGE DPL P G+FDPLGLADDPEA AELKVKEIKNGRLAMFSMFGFFV AIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK Sbjct: 182 LGEGLDPLLPGGAFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 266
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.321e-32 Identity = 67/84 (79.76%), Postives = 71/84 (84.52%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 254 P GE DPLYP SFDPLGLADDP+ FAELKVKEIKNGRLAMFS FGFFV AIVTGKGP++NLADHLADP NNA+A AT F P Sbjct: 171 PAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.144e-31 Identity = 64/84 (76.19%), Postives = 70/84 (83.33%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 254 P GE DPLYP +FDPLGLADDP+ FAELKVKEIKNGRLAMF+ GFFV AIVTGKGP+ENL DHLA+P NNA+AYAT F P Sbjct: 189 PAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTP 272
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.800e-31 Identity = 65/84 (77.38%), Postives = 71/84 (84.52%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 254 P GE DPLYP SFDPLGLADDP+ FAELKVKEIKNGRLA FSMFGFFV AIVTGKGP++NL DHLA+P NNA+A+AT F P Sbjct: 168 PAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251 The following BLAST results are available for this feature:
BLAST of EY665116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665116 ID=EY665116; Name=EY665116; organism=Citrus sinensis; type=EST; length=879bpback to top |