EY665116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.777e-31 Identity = 69/85 (81.18%), Postives = 71/85 (83.53%), Query Frame = 3 Query: 6 LGEVTDPLYPRGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 257 +GE D LYP G FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFV AIVTGKGPLENL DHL +PV NNAW YAT FVPG Sbjct: 181 VGEGND-LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 264
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.815e-30 Identity = 68/85 (80.00%), Postives = 70/85 (82.35%), Query Frame = 3 Query: 6 LGEVTDPLYPRGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 257 +GE D LYP G FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFV AIVTGKGPLENL DHL DPV NNAW +AT F PG Sbjct: 184 VGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAPG 267
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 6.898e-30 Identity = 68/85 (80.00%), Postives = 72/85 (84.71%), Query Frame = 3 Query: 3 PLGEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 257 PLGEVTDPLYP GSFD LGLA+D EAFAELKVKE+KNGRLAMFSMFGFFV AIV+ K LENLADHL VNNNA + TNFVPG Sbjct: 184 PLGEVTDPLYP-GSFDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVPG 267
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 9.961e-29 Identity = 61/79 (77.22%), Postives = 65/79 (82.28%), Query Frame = 3 Query: 21 DPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 257 D LYP G FDPLGLADDP+ FAELKVKEIKNGRLAMFS GFFV AIVTGKGP++NL DHLADP N A+A AT F PG Sbjct: 174 DTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.914e-22 Identity = 53/83 (63.86%), Postives = 58/83 (69.88%), Query Frame = 3 Query: 9 GEVTDPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADP-VNNNAWAYATNFVP 254 GE D LYP G FDPLGLADDP+ F ELKVKEIKNGRLAM M GF+ AIVTG+GP+EN HL DP +N A T F P Sbjct: 39 GEDLDRLYPGGPFDPLGLADDPDTFPELKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTALVTQFAP 121
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.627e-21 Identity = 49/68 (72.06%), Postives = 55/68 (80.88%), Query Frame = 3 Query: 21 DPLYPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNN 224 D L+P G FDPLGLA DPE A LKVKEIKNGRLAMF+M GFF+ A VTG+GP+ENLA HL+DP NN Sbjct: 198 DKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.344e-19 Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 3 Query: 6 LGEVTDPLYPRGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNN 224 LG DP YP G F+PLG D ++ ELK+KEIKNGRLAM ++ G+F+ A+VTG GP +NL DHLADPVNNN Sbjct: 192 LGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 265
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.746e-17 Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = 3 Query: 21 DPLYPRGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVHAIVTGKGPLENLADHLADPVNNN 224 +P YP G F +PLG D ++ ELK+KE+KNGRLAM ++ G+F+ +VTG GP +NL DH+ADPVNNN Sbjct: 199 NPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNN 267
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.670e-16 Identity = 42/66 (63.64%), Postives = 48/66 (72.73%), Query Frame = 3 Query: 30 YPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-HAIVTGKGPLENLADHLADPVNNN 224 YP G+FDPLG + DP F ELK+KEIKNGRLAM + GF V + G GPLENLA HLADP +NN Sbjct: 167 YPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 232
BLAST of EY665116 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.670e-16 Identity = 42/66 (63.64%), Postives = 49/66 (74.24%), Query Frame = 3 Query: 30 YPRGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-HAIVTGKGPLENLADHLADPVNNN 224 YP G+FDPLG + DP F ELKVKEIKNGRLA+ ++ GF V + G GPLENLA HLADP +NN Sbjct: 168 YPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNN 233 The following BLAST results are available for this feature:
BLAST of EY665116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665116 ID=EY665116; Name=EY665116; organism=Citrus sinensis; type=EST; length=879bpback to top |