EY665105

Overview
NameEY665105
Unique NameEY665105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length543
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665105 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.616e-49
Identity = 92/123 (74.80%), Postives = 103/123 (83.74%), Query Frame = 2 
Query:   11 VDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 379
            +DYLGNP+L+HAQSILAIWACQVVLMG VEGYR+                +FDPLGLADDP+ FAEL+VKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct:  144 LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
[Close]
BLAST of EY665105 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 6.028e-49
Identity = 91/123 (73.98%), Postives = 103/123 (83.74%), Query Frame = 2 
Query:   11 VDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 379
            +DYLGNP+L+HAQSILAIWACQVVLMG VEGYR+                +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQA+VTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  144 LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
[Close]
BLAST of EY665105 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 7.873e-49
Identity = 92/123 (74.80%), Postives = 102/123 (82.93%), Query Frame = 2 
Query:   11 VDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 379
            +DYLGNP+L+HAQSILAIWACQV+LMG VEGYRI                +FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW +ATNFVPGK
Sbjct:  145 LDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267
[Close]
BLAST of EY665105 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 7.873e-49
Identity = 92/123 (74.80%), Postives = 101/123 (82.11%), Query Frame = 2 
Query:   11 VDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 379
            +DYLG+P LIHAQSILAIWACQV+LMG +EGYR+                 FDPLGLADDPD FA++KVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATNFVPGK
Sbjct:  156 LDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
[Close]
BLAST of EY665105 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 7.873e-49
Identity = 95/123 (77.24%), Postives = 100/123 (81.30%), Query Frame = 2 
Query:   11 VDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 379
            +DYLGNP+LIHAQSILAIWACQVVLMG VEGYRI                +FDPLGLADDP+ F ELKVKELK GRLAM SMFGFFVQAIVTGKGP+ENL DHIADPV NNAWAYATNFVPGK
Sbjct:  143 LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 265
[Close]
BLAST of EY665105 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.028e-48
Identity = 93/123 (75.61%), Postives = 102/123 (82.93%), Query Frame = 2 
Query:   11 VDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 379
            +DYLGNP+L+HAQSILAIWA QV+LMG VEGYRI                +FDPLGLADDP+ FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  147 LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 269
[Close]
BLAST of EY665105 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.343e-48
Identity = 91/123 (73.98%), Postives = 102/123 (82.93%), Query Frame = 2 
Query:   11 VDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 379
            +DYLGNP+L+HAQSILAIWACQVVLMG VEGYR+                +FDPLGLA+DP+ FAELKVK +KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct:  145 LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
[Close]
BLAST of EY665105 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.291e-48
Identity = 92/123 (74.80%), Postives = 102/123 (82.93%), Query Frame = 2 
Query:   11 VDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 379
            +DYLGNP+L+HAQSILAIWA QV+LMG VEGYRI                +FDPLGLADDP+ FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH++DPV NNAW+YATNFVPGK
Sbjct:  146 LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 268
[Close]
BLAST of EY665105 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.291e-48
Identity = 94/123 (76.42%), Postives = 101/123 (82.11%), Query Frame = 2 
Query:   11 VDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 379
            +DYLGNP+LIHAQSILAIWA QV+LMG VEGYRI                +FDPLGLADDP+ FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+A PV NNAWAYATNFVPGK
Sbjct:  141 LDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPGK 263
[Close]
BLAST of EY665105 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 6.665e-48
Identity = 91/123 (73.98%), Postives = 101/123 (82.11%), Query Frame = 2 
Query:   11 VDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 379
            + YLGNP+L+HAQSILAIWACQVVLMG VEGYR+                +FDPLGLADD + FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct:  142 LQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264
The following BLAST results are available for this feature:
BLAST of EY665105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
CB21_PETSP4.616e-4974.80Chlorophyll a-b binding protein 13, chloroplastic ... [more]
CB25_NICPL6.028e-4973.98Chlorophyll a-b binding protein E, chloroplastic O... [more]
CB2A_SPIOL7.873e-4974.80Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB2A_PYRPY7.873e-4974.80Chlorophyll a-b binding protein 1A, chloroplastic ... [more]
CB22_MAIZE7.873e-4977.24Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB22_PEA1.028e-4875.61Chlorophyll a-b binding protein AB80, chloroplasti... [more]
CB25_TOBAC1.343e-4873.98Chlorophyll a-b binding protein 50, chloroplastic ... [more]
CB28_PEA2.291e-4874.80Chlorophyll a-b binding protein 8, chloroplastic O... [more]
CB23_SOYBN2.291e-4876.42Chlorophyll a-b binding protein 3, chloroplastic O... [more]
CB22_HORVU6.665e-4873.98Chlorophyll a-b binding protein 2, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665105 ID=EY665105; Name=EY665105; organism=Citrus sinensis; type=EST; length=543bp
CCACGCGTCCGTTGACTATCTTGGCAACCCCAACCTCATTCATGCTCAGA
GCATTTTGGCTATCTGGGCCTGCCAGGTTGTGCTCATGGGTTTTGTTGAA
GGATACAGAATTGGTGGCGGTCCTCTTGGTGAAGGACTTGACCCACTTTA
CCCTGGTGGTGCTTTTGACCCACTTGGTTTGGCTGATGACCCCGATCAAT
TTGCTGAGTTGAAGGTCAAGGAGCTCAAGAATGGCCGTCTGGCTATGTTC
TCCATGTTTGGATTCTTTGTTCAGGCTATTGTCACTGGGAAGGGTCCAAT
TGAGAACCTCTACGACCACATTGCTGATCCTGTGGCCAACAATGCCTGGG
CTTATGCCACTAACTTTGTTCCCGGAAAGTGAAGAAACTCATGACTTGAT
GGTGTCTGTTTCATCTGTAACATTATTCTATCTATCGTATGTGCTTTTGT
GGAAAACTCTGTCATGGACTTACTAGTAGCTCTGTAATGTTACCATTAGA
AATGCTATGCTCCTGATCTTTTATTTCAAAAAAAAAAAAAAAA
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