EY665104

Overview
NameEY665104
Unique NameEY665104
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665104 vs. ExPASy Swiss-Prot
Match: CALM_KARMI (Calmodulin OS=Karlodinium micrum PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.527e-24
Identity = 57/145 (39.31%), Postives = 87/145 (60.00%), Query Frame = 3 
Query:   12 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 437
            A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF++     +   + EE L+ AF+ FD+DG+G+I+  EL+         +TD  ++++IRE D D DG+I+Y EFV MM
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146
[Close]
BLAST of EY665104 vs. ExPASy Swiss-Prot
Match: CALM_ALEFU (Calmodulin OS=Alexandrium fundyense PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.527e-24
Identity = 57/145 (39.31%), Postives = 87/145 (60.00%), Query Frame = 3 
Query:   12 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 437
            A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF++     +   + EE L+ AF+ FD+DG+G+I+  EL+         +TD  ++++IRE D D DG+I+Y EFV MM
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146
[Close]
BLAST of EY665104 vs. ExPASy Swiss-Prot
Match: CALM_HALOK (Calmodulin OS=Halichondria okadai PE=2 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 7.219e-24
Identity = 57/144 (39.58%), Postives = 87/144 (60.42%), Query Frame = 3 
Query:   15 ESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 437
            ++LSEE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      + + + EE +  AF+ FDKDG+G+I+  EL+         +TD  ++++IRE D D DG+++Y EFVAMM
Sbjct:    3 DALSEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMM 146
[Close]
BLAST of EY665104 vs. ExPASy Swiss-Prot
Match: CALM_PLEOS (Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 9.428e-24
Identity = 58/145 (40.00%), Postives = 85/145 (58.62%), Query Frame = 3 
Query:   12 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 437
            A+ LSEE+I+  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      +   + EE +  AF+ FDKDG+GYI+  EL+         +TD  ++++IRE D D DG+I+Y EFV MM
Sbjct:    2 ADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDNEVDEMIREADVDGDGQINYEEFVKMM 146
[Close]
BLAST of EY665104 vs. ExPASy Swiss-Prot
Match: CALM_MACPY (Calmodulin OS=Macrocystis pyrifera PE=2 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 9.428e-24
Identity = 57/145 (39.31%), Postives = 86/145 (59.31%), Query Frame = 3 
Query:   12 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 437
            A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      +   + EE ++ AF+ FDKDG+G+I+  EL+         +TD  ++++IRE D D DG+I+Y EFV MM
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIIEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMM 146
[Close]
BLAST of EY665104 vs. ExPASy Swiss-Prot
Match: CALM_HETTR (Calmodulin OS=Heterocapsa triquetra PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.428e-24
Identity = 57/145 (39.31%), Postives = 87/145 (60.00%), Query Frame = 3 
Query:   12 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 437
            A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF++     +   + EE L+ AF+ FD+DG+G+I+  EL+         +TD  ++++IRE D D DG+I+Y EFV MM
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDSDGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146
[Close]
BLAST of EY665104 vs. ExPASy Swiss-Prot
Match: CALMS_CHICK (Calmodulin, striated muscle OS=Gallus gallus GN=CCM1 PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 9.428e-24
Identity = 59/145 (40.69%), Postives = 86/145 (59.31%), Query Frame = 3 
Query:   12 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 437
            AE LSEE+IA  KE F   D D  G IT  EL   +R  G    + E++D++   D D SGTID+ EF++     +   + EE +  AF+ FDKDG+GYI+  EL+         +TD  ++++I+E D +NDG+++Y EFV MM
Sbjct:    2 AERLSEEQIAEFKEAFSLFDRDGDGCITTMELGTVMRSLGQNPTEAELQDMVGEVDADGSGTIDFPEFLSLMARKMRDSDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIKEADCNNDGQVNYEEFVRMM 146
[Close]
BLAST of EY665104 vs. ExPASy Swiss-Prot
Match: CALM_SUBDO (Calmodulin OS=Suberites domuncula PE=2 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 1.231e-23
Identity = 56/145 (38.62%), Postives = 86/145 (59.31%), Query Frame = 3 
Query:   12 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 437
            A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      + + + EE +  AF+ FDKDG+G+I+  EL+         +TD  ++++IRE D D DG+++Y EFV MM
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDTDGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADTDGDGQVNYEEFVGMM 146
[Close]
BLAST of EY665104 vs. ExPASy Swiss-Prot
Match: CALM_STYLE (Calmodulin OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.231e-23
Identity = 58/145 (40.00%), Postives = 86/145 (59.31%), Query Frame = 3 
Query:   12 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 437
            A++L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF++     +   + EE LV AF+ FD+DG+G I+  EL+         +TD  ++++IRE D D DG I+Y EFV MM
Sbjct:    2 ADNLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELVEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGHINYEEFVRMM 146
[Close]
BLAST of EY665104 vs. ExPASy Swiss-Prot
Match: CALM_STIJA (Calmodulin OS=Stichopus japonicus PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.231e-23
Identity = 57/145 (39.31%), Postives = 85/145 (58.62%), Query Frame = 3 
Query:   12 AESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAE--HNMTDVLLEDIIREVDQDNDGRIDYGEFVAMM 437
            A+ L+EE+IA  KE F   D D  G IT  EL   +R  G    + E++D+++  D D +GTID+ EF+      +   + EE +  AF+ FDKDG+GYI+  EL+         +TD  ++++IRE D D DG+++Y EFV MM
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
The following BLAST results are available for this feature:
BLAST of EY665104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 299
Match NameE-valueIdentityDescription
CALM_KARMI5.527e-2439.31Calmodulin OS=Karlodinium micrum PE=2 SV=1[more]
CALM_ALEFU5.527e-2439.31Calmodulin OS=Alexandrium fundyense PE=2 SV=1[more]
CALM_HALOK7.219e-2439.58Calmodulin OS=Halichondria okadai PE=2 SV=3[more]
CALM_PLEOS9.428e-2440.00Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=... [more]
CALM_MACPY9.428e-2439.31Calmodulin OS=Macrocystis pyrifera PE=2 SV=3[more]
CALM_HETTR9.428e-2439.31Calmodulin OS=Heterocapsa triquetra PE=2 SV=1[more]
CALMS_CHICK9.428e-2440.69Calmodulin, striated muscle OS=Gallus gallus GN=CC... [more]
CALM_SUBDO1.231e-2338.62Calmodulin OS=Suberites domuncula PE=2 SV=3[more]
CALM_STYLE1.231e-2340.00Calmodulin OS=Stylonychia lemnae PE=3 SV=2[more]
CALM_STIJA1.231e-2339.31Calmodulin OS=Stichopus japonicus PE=1 SV=2[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-A12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665104 ID=EY665104; Name=EY665104; organism=Citrus sinensis; type=EST; length=867bp
CCACGCGTCCGGCTGAAAGCCTTTCTGAAGAGGAGATTGCTGGTTTAAAG
GAAATGTTCAAGGCCATGGATACTGACAATAGTGGTGCAATTACATTTGA
TGAACTCAAAGCTGGTTTACGAAGATATGGCTCTACCTTGAAGGATACAG
AGATACGTGATCTTATGGATGCGGCTGATGTGGACAATAGTGGAACTATT
GATTATGGAGAATTTATAGCTGCAACTGTTCACCTCAATAAATTAGAACG
TGAGGAACATCTTGTTGCTGCATTCCAGTACTTTGACAAGGATGGAAGTG
GTTATATTACGGTTGATGAACTTCAGCAAGCATGTGCTGAACATAACATG
ACAGATGTTTTACTTGAAGATATAATCAGAGAAGTTGATCAAGATAATGA
TGGAAGAATTGACTATGGTGAATTTGTTGCCATGATGCAAAAAGGCAACG
TGGGATTGGGTAGAAGAACTATGCGAAACAGTCTGAACATGAGCATGAGA
GATGCACCAGGTTCTCAATAACTTGGAGTCATACACATTGTGTACAGGTC
GTACAGCAAGCTAGTTGAGGTGATTGTTAACTGCTACGAGGAAAGTTTTT
GGTCCTTGTTAGTCAAAAACTTTCCTGGGTCACTGAAATATGGACAAGAG
ATGCTTTATGCCTGATTTGTCTTCTAAATGTTANTAGGTTGCTGTATAAC
GGAACAACATGGCCAGTAGCTTAATGAACCAAATGTGGAGTGGGCGAGTA
TTCGAGTTTGGGTTTCCTTGGCTGATGTTTTTATTAATGGTGAAGAGAAA
GATTGGGTCATGGATTGCTCACGAGCAATCAAAAGCCTTATTGATGACAG
GGAAGCGTTTTGAATGT
back to top