EY665099

Overview
NameEY665099
Unique NameEY665099
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665099 vs. ExPASy Swiss-Prot
Match: GLRX4_BUCBP (Glutaredoxin-4 OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=grxD PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.553e-17
Identity = 35/89 (39.33%), Postives = 59/89 (66.29%), Query Frame = 1
Query:  283 VTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELL 549
            +  N ++++MKG+ D P CGFS   V  + S    F  +++L+N  +R  L +Y++WPTFPQL++ GE  GGC+I +E ++ GEL++ +
Sbjct:   12 IQNNPIIIYMKGSPDAPSCGFSAQAVHAISSCGKKFAYIDVLKNPDIRLELPKYANWPTFPQLWVNGELIGGCNIILELFQKGELKKTI 100          
BLAST of EY665099 vs. ExPASy Swiss-Prot
Match: GLRX4_YEAST (Monothiol glutaredoxin-4 OS=Saccharomyces cerevisiae GN=GRX4 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.354e-17
Identity = 44/88 (50.00%), Postives = 58/88 (65.91%), Query Frame = 1
Query:  256 ELKSTLDKVVTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEA 519
            E+ + L K+V    V+LFMKG+   P+CGFS  +V IL+     F   +IL +E +RQ LK++S WPTFPQLYI GEF GG DI  E+
Sbjct:  144 EINARLVKLVQAAPVMLFMKGSPSEPKCGFSRQLVGILREHQIRFGFFDILRDENVRQSLKKFSDWPTFPQLYINGEFQGGLDIIKES 231          
BLAST of EY665099 vs. ExPASy Swiss-Prot
Match: GRXS4_ORYSJ (Monothiol glutaredoxin-S4 OS=Oryza sativa subsp. japonica GN=GRXS4 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.687e-17
Identity = 36/86 (41.86%), Postives = 62/86 (72.09%), Query Frame = 1
Query:  292 NKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELL 549
            N V+++MKG  D P+CGFS   V++LK  + P    +IL +  L++ +K +++WPTFPQ++I+GEF GG DI ++ ++ G+L+++L
Sbjct:   87 NPVLIYMKGYPDAPRCGFSALAVRVLKQYDVPISARDILGDLKLKESVKAHTNWPTFPQIFIKGEFVGGSDIILDMHQKGQLKDVL 172          
BLAST of EY665099 vs. ExPASy Swiss-Prot
Match: GRXS1_ORYSJ (Montothiol glutaredoxin-S1, mitochondrial OS=Oryza sativa subsp. japonica GN=GRXS1 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 8.212e-16
Identity = 35/86 (40.70%), Postives = 61/86 (70.93%), Query Frame = 1
Query:  292 NKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELL 549
            N V+++MKG  + P CGFS   V++LK  + P    +IL +  L++ +K +++WPTFPQ++I+GEF GG DI ++ ++ G+L+++L
Sbjct:   87 NPVLIYMKGFPESPMCGFSALAVKVLKLYDVPISARDILGDLKLKECVKAHTNWPTFPQIFIKGEFVGGSDIILDMHQKGQLKDVL 172          
The following BLAST results are available for this feature:
BLAST of EY665099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
GLRX4_BUCBP2.553e-1739.33Glutaredoxin-4 OS=Buchnera aphidicola subsp. Baizo... [more]
GLRX4_YEAST4.354e-1750.00Monothiol glutaredoxin-4 OS=Saccharomyces cerevisi... [more]
GRXS4_ORYSJ5.687e-1741.86Monothiol glutaredoxin-S4 OS=Oryza sativa subsp. j... [more]
GRXS1_ORYSJ8.212e-1640.70Montothiol glutaredoxin-S1, mitochondrial OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-A06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665099 ID=EY665099; Name=EY665099; organism=Citrus sinensis; type=EST; length=678bp
CCACGCGTCCGGCTCGTAGTTGGGGCTGTTATGGCTCTTCTTCATTCGTC
GATGACTGCAACGCCACGCGCCTTCACCTGTAAATCAGTATCGGTGGGCA
AAGTTGCATCCTTTCCACCTCCGCTTGTGAATTTCGCATCTCCGTCATCT
TACTCTCCGCGCTCCTTGACCGGCGTCACAAATAATCTCCGCCTGTTGGG
GGTTAAGTCTAACAAAGCCACGACCTTTCGCTGCTTGGCTTCTGCTTTGA
CACCTGAGCTCAAGTCAACATTGGATAAAGTTGTTACAGGAAACAAAGTG
GTTCTGTTTATGAAGGGCACGAAGGATTTCCCACAATGCGGATTCTCACA
CACTGTGGTGCAGATATTGAAGTCCTTGAATGCACCATTTGAAACGGTAA
ACATTCTAGAAAATGAAATGTTACGACAAGGGTTGAAGGAGTATTCTAGT
TGGCCAACCTTTCCTCAACTTTACATTGAAGGAGAGTTTTTTGGTGGCTG
TGACATCACAGTTGAGGCCTATAAGAATGGGGAATTGCAAGAACTATTGG
AGAAGGCACTGTGCACCTGAGACTCTTTTAGTTGGAAGAGGGCTATTATA
CTTGTGTACTTGCTTAGTGGTGATTAGAAAAAATCAACTGTTGTTTCTTG
CTTGGTTCTGATTAAAAAAAAAAAAAAA
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