FC871836
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_RHILO (ATP synthase gamma chain OS=Rhizobium loti GN=atpG PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 6.971e-19 Identity = 47/75 (62.67%), Postives = 59/75 (78.67%), Query Frame = 1 Query: 46 GEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 GEIL +L S +F A+LENA E GA+MSAMD+++RNAGEM+++L++TYNR RQA IT ELIEIISGA AL Sbjct: 220 GEILSDLIPRNISVQVFRALLENAAGEMGAKMSAMDNATRNAGEMINKLSITYNRQRQAQITKELIEIISGAEAL 294
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_RHIME (ATP synthase gamma chain OS=Rhizobium meliloti GN=atpG PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.104e-19 Identity = 52/96 (54.17%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 4 GELDSYEIEGGET-------KGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 GE+ + E EG G IL +L S +F A+LEN E GA+MSAMD+++RNAGEM+D+LTL+YNR RQA IT ELIEIISGA AL Sbjct: 199 GEVAAAEGEGASAIYEYEPEAGAILSDLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGEMIDKLTLSYNRQRQAQITKELIEIISGAEAL 294
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_METPB (ATP synthase gamma chain OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=atpG PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.104e-19 Identity = 49/73 (67.12%), Postives = 57/73 (78.08%), Query Frame = 1 Query: 52 ILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 IL+ L + +F A+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL Sbjct: 223 ILETLLPKNLTVQVFRALLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEIISGAEAL 295
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_METEP (ATP synthase gamma chain OS=Methylobacterium extorquens (strain PA1) GN=atpG PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.104e-19 Identity = 49/73 (67.12%), Postives = 57/73 (78.08%), Query Frame = 1 Query: 52 ILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 IL+ L + +F A+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL Sbjct: 224 ILETLLPKNLTVQIFRALLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEIISGAEAL 296
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_METC4 (ATP synthase gamma chain OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=atpG PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.104e-19 Identity = 49/73 (67.12%), Postives = 57/73 (78.08%), Query Frame = 1 Query: 52 ILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 IL+ L + +F A+LENA SEQGARMSAMDS++RNAGEM+ + TL YNRTRQA IT ELIEIISGA AL Sbjct: 224 ILETLLPKNLTVQIFRALLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEIISGAEAL 296
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_SPHWW (ATP synthase gamma chain OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=atpG PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.189e-18 Identity = 46/73 (63.01%), Postives = 60/73 (82.19%), Query Frame = 1 Query: 52 ILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 IL L + +F A+LENA SEQG+RM+AMD+++RNAGEM+++LT+ YNRTRQA+ITTELIEII+GA AL Sbjct: 222 ILTELLPRNVAVQLFRAMLENAASEQGSRMTAMDNATRNAGEMINKLTIQYNRTRQAAITTELIEIIAGAEAL 294
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_PARDP (ATP synthase gamma chain OS=Paracoccus denitrificans (strain Pd 1222) GN=atpG PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.189e-18 Identity = 51/89 (57.30%), Postives = 64/89 (71.91%), Query Frame = 1 Query: 4 GELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 G Y+ E E IL +L + +F A+LENA SEQGARM+AMD+++RNAG+M+DRLT YNR+RQA+IT ELIEIISGA AL Sbjct: 204 GASSLYDYEPDENA--ILNDLLPRSVATQVFAALLENAASEQGARMTAMDNATRNAGDMIDRLTTVYNRSRQAAITKELIEIISGAEAL 290
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_SPHAL (ATP synthase gamma chain OS=Sphingopyxis alaskensis GN=atpG PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.553e-18 Identity = 49/83 (59.04%), Postives = 64/83 (77.11%), Query Frame = 1 Query: 22 EIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 E E GE EIL +L + +F +LENA SEQGA M+AMD+++RNAGE++++LT+ YNRTRQA+ITTELIEII+GA AL Sbjct: 211 EYEPGEE--EILADLLPRNVTIQIFKGLLENAASEQGASMTAMDNATRNAGELINKLTIIYNRTRQAAITTELIEIIAGAEAL 291
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_RHOS5 (ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=atpG PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.649e-18 Identity = 51/90 (56.67%), Postives = 68/90 (75.56%), Query Frame = 1 Query: 4 GELDS-YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 GE++S Y+ E E +L +L + +F A+LEN SEQGARMSAMD+++RNAG+M++RLT+ YNR+RQA+IT ELIEIISGA AL Sbjct: 202 GEVNSLYDYEPSEEG--VLADLLPRGVATQIFTALLENGASEQGARMSAMDNATRNAGDMINRLTIQYNRSRQAAITKELIEIISGAEAL 289
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_MACFA (ATP synthase subunit gamma, mitochondrial OS=Macaca fascicularis GN=ATP5C1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.649e-18 Identity = 43/75 (57.33%), Postives = 63/75 (84.00%), Query Frame = 1 Query: 49 EILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 273 ++LQN E+ + +++ ++ E++ SEQ ARM+AMD++S+NA EM+D+LTLT+NRTRQA IT ELIEIISGA+AL+ Sbjct: 224 DVLQNYQEYNLANIIYYSLKESSTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298 The following BLAST results are available for this feature:
BLAST of FC871836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 370
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC871836 ID=FC871836; Name=FC871836; organism=Citrus sinensis; type=EST; length=495bpback to top |