FC871836

Overview
NameFC871836
Unique NameFC871836
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_FRATO (ATP synthase gamma chain OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=atpG PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.125e-11
Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 1
Query:   49 EILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270
            E+L  L        +  A+LENA  EQ ARM AM +++ NA +++D+L L YN+ RQA IT EL EI SGA+A+
Sbjct:  225 EVLNALCIRYIEAQVRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298          
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_FRATN (ATP synthase gamma chain OS=Francisella tularensis subsp. novicida (strain U112) GN=atpG PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.125e-11
Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 1
Query:   49 EILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270
            E+L  L        +  A+LENA  EQ ARM AM +++ NA +++D+L L YN+ RQA IT EL EI SGA+A+
Sbjct:  225 EVLNALCIRYIEAQVRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298          
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_FRATM (ATP synthase gamma chain OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=atpG PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.125e-11
Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 1
Query:   49 EILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270
            E+L  L        +  A+LENA  EQ ARM AM +++ NA +++D+L L YN+ RQA IT EL EI SGA+A+
Sbjct:  225 EVLNALCIRYIEAQVRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298          
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_FRATH (ATP synthase gamma chain OS=Francisella tularensis subsp. holarctica (strain LVS) GN=atpG PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.125e-11
Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 1
Query:   49 EILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270
            E+L  L        +  A+LENA  EQ ARM AM +++ NA +++D+L L YN+ RQA IT EL EI SGA+A+
Sbjct:  225 EVLNALCIRYIEAQVRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298          
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_FRATF (ATP synthase gamma chain OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=atpG PE=3 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 9.125e-11
Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 1
Query:   49 EILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270
            E+L  L        +  A+LENA  EQ ARM AM +++ NA +++D+L L YN+ RQA IT EL EI SGA+A+
Sbjct:  225 EVLNALCIRYIEAQVRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298          
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_FRAP2 (ATP synthase gamma chain OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=atpG PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.125e-11
Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 1
Query:   49 EILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270
            E+L  L        +  A+LENA  EQ ARM AM +++ NA +++D+L L YN+ RQA IT EL EI SGA+A+
Sbjct:  225 EVLNALCIRYIEAQVRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298          
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_CHRSD (ATP synthase gamma chain OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=atpG PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.125e-11
Identity = 31/60 (51.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query:   91 MFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270
            ++ AV+ENA  EQ ARM AM +++ NAG ++D L L YN+ RQA+IT E+ EI+ GA+A+
Sbjct:  233 VYQAVVENAACEQAARMIAMKNATDNAGNLIDDLELVYNKARQAAITQEISEIVGGAAAV 292          
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_BORPE (ATP synthase gamma chain OS=Bordetella pertussis GN=atpG PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.125e-11
Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 1
Query:   19 YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270
            YE +      ++LQ   E     +++ AV EN  SEQ ARM AM S+S NA +++  L L YN+TRQA+IT E+ EI+ GA+A+
Sbjct:  222 YEPDAKSVIDDLLQRYVEG----LLYQAVAENMASEQSARMVAMKSASDNAKKVIGDLQLVYNKTRQAAITKEISEIVGGAAAV 301          
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_BORPA (ATP synthase gamma chain OS=Bordetella parapertussis GN=atpG PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.125e-11
Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 1
Query:   19 YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270
            YE +      ++LQ   E     +++ AV EN  SEQ ARM AM S+S NA +++  L L YN+TRQA+IT E+ EI+ GA+A+
Sbjct:  222 YEPDAKSVIDDLLQRYVEG----LLYQAVAENMASEQSARMVAMKSASDNAKKVIGDLQLVYNKTRQAAITKEISEIVGGAAAV 301          
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_BORBR (ATP synthase gamma chain OS=Bordetella bronchiseptica GN=atpG PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.125e-11
Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 1
Query:   19 YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270
            YE +      ++LQ   E     +++ AV EN  SEQ ARM AM S+S NA +++  L L YN+TRQA+IT E+ EI+ GA+A+
Sbjct:  222 YEPDAKSVIDDLLQRYVEG----LLYQAVAENMASEQSARMVAMKSASDNAKKVIGDLQLVYNKTRQAAITKEISEIVGGAAAV 301          
The following BLAST results are available for this feature:
BLAST of FC871836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
ATPG_FRATO9.125e-1147.30ATP synthase gamma chain OS=Francisella tularensis... [more]
ATPG_FRATN9.125e-1147.30ATP synthase gamma chain OS=Francisella tularensis... [more]
ATPG_FRATM9.125e-1147.30ATP synthase gamma chain OS=Francisella tularensis... [more]
ATPG_FRATH9.125e-1147.30ATP synthase gamma chain OS=Francisella tularensis... [more]
ATPG_FRATF9.125e-1147.30ATP synthase gamma chain OS=Francisella tularensis... [more]
ATPG_FRAP29.125e-1147.30ATP synthase gamma chain OS=Francisella philomirag... [more]
ATPG_CHRSD9.125e-1151.67ATP synthase gamma chain OS=Chromohalobacter salex... [more]
ATPG_BORPE9.125e-1144.05ATP synthase gamma chain OS=Bordetella pertussis G... [more]
ATPG_BORPA9.125e-1144.05ATP synthase gamma chain OS=Bordetella parapertuss... [more]
ATPG_BORBR9.125e-1144.05ATP synthase gamma chain OS=Bordetella bronchisept... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1DD06FM2 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK1DD06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871836 ID=FC871836; Name=FC871836; organism=Citrus sinensis; type=EST; length=495bp
CTTGGTGAGCTAGACTCCTATGAAATTGAAGGCGGTGAAACAAAGGGTGA
AATACTTCAAAATCTGGCTGAGTTCCAATTCTCTTGTGTCATGTTCAATG
CGGTGTTGGAGAATGCCTGCAGTGAGCAAGGGGCAAGGATGTCTGCCATG
GATAGCTCAAGCAGAAATGCAGGAGAAATGCTTGATCGCCTCACTCTTAC
TTATAACAGAACTCGTCAAGCATCTATCACCACCGAGTTGATTGAGATTA
TATCTGGAGCATCAGCACTGGAAGGCTGATTACAAAAGCGACAGTGCTCA
CTTTTCTTGACAGTGACGAAATAAATCCTTGGTGGAGGCTTTGTTCAAAC
TTCAATGTGGTACTTTCATAAGAGTTTTTGTTGAGCTACTCCAATAATCT
CTCCAGTGTTAAAACTTGGGGAATTAACAATTATACTTGCGATATTTTCA
ATATAGTTTTTGATTCTCAATTAAAAAAAAAAAAAAAAAAAAAAA
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