FC871836
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_RHOCA (ATP synthase gamma chain OS=Rhodobacter capsulatus GN=atpG PE=1 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 3.825e-17 Identity = 48/84 (57.14%), Postives = 62/84 (73.81%), Query Frame = 1 Query: 19 YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 Y+ E G+ EIL L + +F A+LEN S GA+MSAMD+++RNAG+M+DRLT+ YNR+RQA+IT ELIEIISGA AL Sbjct: 209 YDYEPGDQ--EILTALLPRAVATAIFAALLENNASFNGAQMSAMDNATRNAGDMIDRLTIEYNRSRQAAITKELIEIISGAEAL 290
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_RHISN (ATP synthase gamma chain OS=Rhizobium sp. (strain NGR234) GN=atpG PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.825e-17 Identity = 45/73 (61.64%), Postives = 55/73 (75.34%), Query Frame = 1 Query: 52 ILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 IL +L S +F A+LEN E GA+MSAMD+++RNAGEM+++LTL YNR RQA IT ELIEIISGA AL Sbjct: 221 ILTDLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGEMINKLTLNYNRQRQAQITKELIEIISGAEAL 293
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_MAGSA (ATP synthase gamma chain OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=atpG PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.825e-17 Identity = 47/84 (55.95%), Postives = 60/84 (71.43%), Query Frame = 1 Query: 19 YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 YE E E EIL + + MF A+LE+ SEQGARM+AMD+++RNAG+M++ L + YNR+RQA IT ELIEIISGA AL Sbjct: 213 YEFEPSEE--EILAEILPRNLATQMFRALLESQASEQGARMTAMDNATRNAGDMINALAIKYNRSRQAQITKELIEIISGAEAL 294
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_GEOUR (ATP synthase gamma chain OS=Geobacter uraniireducens (strain Rf4) GN=atpG PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.825e-17 Identity = 43/79 (54.43%), Postives = 58/79 (73.42%), Query Frame = 1 Query: 40 TKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 276 +K +L L MF A+LE+ SE GARM+AMDS+S+NA EM+ +LTL YNR RQA+ITTEL+EIISG+ +++G Sbjct: 209 SKAALLDELLPKHIEVQMFKAMLESVASEHGARMTAMDSASKNASEMIGKLTLQYNRARQAAITTELMEIISGSESIKG 287
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_ERYLH (ATP synthase gamma chain OS=Erythrobacter litoralis (strain HTCC2594) GN=atpG PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 4.995e-17 Identity = 46/83 (55.42%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 22 EIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 E E GE EIL+ L +F A+LE SEQGA M+AMD+++RNAG+++++LT+ YNR+RQA+ITTELIEII+GA AL Sbjct: 210 EYEPGEE--EILEELLPRYVKTQLFGALLEREASEQGASMTAMDNATRNAGDLINKLTIQYNRSRQAAITTELIEIIAGAEAL 290
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_BART1 (ATP synthase gamma chain OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=atpG PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 4.995e-17 Identity = 43/73 (58.90%), Postives = 56/73 (76.71%), Query Frame = 1 Query: 52 ILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 +L+ L S +F A+LEN E GA+M+AMD++SRNAGEM+++LT+ YNR RQA ITTELIEII+GA AL Sbjct: 236 LLEALVPRNLSVQIFRALLENVAGEMGAKMTAMDNASRNAGEMINKLTVAYNRQRQAQITTELIEIIAGAEAL 308
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_AGRRK (ATP synthase gamma chain OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=atpG PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.524e-17 Identity = 44/73 (60.27%), Postives = 56/73 (76.71%), Query Frame = 1 Query: 52 ILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 IL +L S +F A+LEN E G++MSAMD+++RNAGEM+++LTL+YNR RQA IT ELIEIISGA AL Sbjct: 222 ILADLIPRNISVQIFRALLENVAGEMGSKMSAMDNATRNAGEMINKLTLSYNRQRQAQITKELIEIISGAEAL 294
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_BARQU (ATP synthase gamma chain OS=Bartonella quintana GN=atpG PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 8.521e-17 Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 1 Query: 52 ILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 +L+ L S +F A+LEN E GA+++AMD++SRNAGEM+++LT+ YNR RQA ITTELIEII+GA AL Sbjct: 231 LLEELVPRNLSVQIFQALLENVAGEMGAKVTAMDNASRNAGEMINKLTVAYNRQRQAQITTELIEIIAGAEAL 303
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_OCHA4 (ATP synthase gamma chain OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=atpG PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.113e-16 Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 1 Query: 52 ILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 IL L S +F A+LEN E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL Sbjct: 220 ILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292
BLAST of FC871836 vs. ExPASy Swiss-Prot
Match: ATPG_GRABC (ATP synthase gamma chain OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=atpG PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.113e-16 Identity = 46/84 (54.76%), Postives = 60/84 (71.43%), Query Frame = 1 Query: 19 YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 270 YE E E +L L + ++ A+LE+A E ARM+AMD+++RNAG+M+ RL+LTYNRTRQA+IT ELIEIISGA AL Sbjct: 217 YEFEPDEET--LLAKLLPQNLAIQIYRAILESAAGEHAARMTAMDNATRNAGDMIKRLSLTYNRTRQANITRELIEIISGAEAL 298 The following BLAST results are available for this feature:
BLAST of FC871836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 370
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871836 ID=FC871836; Name=FC871836; organism=Citrus sinensis; type=EST; length=495bpback to top |