EY665088

Overview
NameEY665088
Unique NameEY665088
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length408
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7736 contig Csv1_Contig7736:953..1360. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY665088 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 4.007e-12
Identity = 33/35 (94.29%), Postives = 35/35 (100.00%), Query Frame = 3 
Query:    3 TPVVNALSKQRAMLENILRACVGLAPENNMILEYK 107
            TPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  476 TPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510
[Close]
BLAST of EY665088 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 4.007e-12
Identity = 33/35 (94.29%), Postives = 35/35 (100.00%), Query Frame = 3 
Query:    3 TPVVNALSKQRAMLENILRACVGLAPENNMILEYK 107
            TPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  476 TPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510
[Close]
BLAST of EY665088 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.007e-12
Identity = 33/35 (94.29%), Postives = 35/35 (100.00%), Query Frame = 3 
Query:    3 TPVVNALSKQRAMLENILRACVGLAPENNMILEYK 107
            TPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  476 TPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510
[Close]
BLAST of EY665088 vs. ExPASy Swiss-Prot
Match: INO1_PHAVU (Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.166e-11
Identity = 31/35 (88.57%), Postives = 35/35 (100.00%), Query Frame = 3 
Query:    3 TPVVNALSKQRAMLENILRACVGLAPENNMILEYK 107
            TPV+NALSKQRAMLENI+RACVGLAPENNMI+E+K
Sbjct:  477 TPVINALSKQRAMLENIMRACVGLAPENNMIMEFK 511
[Close]
BLAST of EY665088 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 1.166e-11
Identity = 31/35 (88.57%), Postives = 35/35 (100.00%), Query Frame = 3 
Query:    3 TPVVNALSKQRAMLENILRACVGLAPENNMILEYK 107
            TPV+NALSKQRAMLENI+RACVGLAPENNMI+E+K
Sbjct:  477 TPVINALSKQRAMLENIMRACVGLAPENNMIMEFK 511
The following BLAST results are available for this feature:
BLAST of EY665088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
INO1_ORYSJ4.007e-1294.29Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO1_MAIZE4.007e-1294.29Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]
INO1_HORVU4.007e-1294.29Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1_PHAVU1.166e-1188.57Inositol-3-phosphate synthase OS=Phaseolus vulgari... [more]
INO1_ARATH1.166e-1188.57Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-H05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665088 ID=EY665088; Name=EY665088; organism=Citrus sinensis; type=EST; length=408bp
GCACACCAGTGGTGAATGCGCTGTCGAAGCAGCGTGCAATGCTTGAGAAC
ATTCTGAGGGCTTGCGTTGGCTTGGCTCCTGAGAACAACATGATTTTGGA
ATACAAGTGAAGAACTTGCAGGGGAGAAAAGTGGAAGAACCGGTTTTCCC
TTTCTCTGTCACCAATCAAAGCTGTGGTGGTCCATTTAATTACTGATTGT
AATGTCTTGTGTCATGAAATTGTGGTTAATATTAGTGTGTCCTGTATGTT
TGCTCTTTTATTTTTTTAATGAAGGTGCTGGAGTGTAGCCCATTGCCTTT
GTAGCTCATTTCGGAGCATGAAATCTCTTGTATTGCAAGTAGATAATATA
TGGAAGTTCATAAATAACTGTATTGCGGCAAAAAAAAAAAAAAAAAAAAA
AAAAAANA
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