EY665070
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665070 vs. ExPASy Swiss-Prot
Match: ATPD_RAT (ATP synthase subunit delta, mitochondrial OS=Rattus norvegicus GN=Atp5d PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 7.136e-17 Identity = 48/137 (35.04%), Postives = 73/137 (53.28%), Query Frame = 1 Query: 217 PTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLXKAEAQIGVDVHSALNSAL 624 P + P +++ F P V V VP TG G+L HVPT+ L+PG++ VH + T KYFVSSG ++A+S ++A E V +D +D + L + +LS A + +AE QI ++ + AL AL Sbjct: 31 PAAGPGQMSFTFASPTQVFFDGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVMVHAEDGTTTKYFVSSGSVTVNADSSVQLLAEEVVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQIRIEANEALVKAL 167
BLAST of EY665070 vs. ExPASy Swiss-Prot
Match: ATPD_HUMAN (ATP synthase subunit delta, mitochondrial OS=Homo sapiens GN=ATP5D PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.030e-15 Identity = 46/133 (34.59%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 229 PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLXKAEAQIGVDVHSALNSAL 624 P++++ F P + V V VP TG G+L HVPT+ L+PG++ VH + T KYFVSSG ++A+S ++A EAV +D +D + L + +L + +AE QI ++ + AL AL Sbjct: 35 PNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRAEIQIRIEANEALVKAL 167
BLAST of EY665070 vs. ExPASy Swiss-Prot
Match: ATPD_NEUCR (ATP synthase subunit delta, mitochondrial OS=Neurospora crassa GN=atp-16 PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.998e-15 Identity = 44/135 (32.59%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 223 SIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLXKAEAQIGVDVHSALNSAL 624 ++ K+ ++ LP+ + +++V V +PA +G+MGVL HVP+I +LKPG++ V + K+YF+S GFA + S I AVE ++ V+ +AE + +S + AEAQ+ ++V +L + L Sbjct: 30 AVADKIKLSLSLPHQAIYKSQDVVQVNIPAVSGEMGVLANHVPSIEQLKPGLVEVIEESGSNKQYFLSGGFAVVQPGSKLSINAVEGYALEDFSAEAVRAQIAEAQKIVSGGGSQQDIAEAQVELEVLESLQAVL 164
BLAST of EY665070 vs. ExPASy Swiss-Prot
Match: ATPD_CAEEL (ATP synthase subunit delta, mitochondrial OS=Caenorhabditis elegans GN=F58F12.1 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.329e-14 Identity = 49/134 (36.57%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 229 PSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDT-KKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLXKAEAQIGVDVHSALNSALT 627 P +L + F P + S V V VP G +GVL HVPTI LKPGV+SV T ++ FVSSG ++ + ++A E + +++ID S + L + Q+ S +++ +AEAQI +V AL A T Sbjct: 28 PEELRLTFASPDTAVFSNAVVKQVDVPTLAGMVGVLANHVPTIGVLKPGVVSVTTNEGTVQRLFVSSGTLSVNIDGSCQVLAEEVLKVEEIDESAARAEL-DAAQRASGEGSEVARAEAQIRAEVAEALIKAAT 160
BLAST of EY665070 vs. ExPASy Swiss-Prot
Match: ATPD_SCHPO (ATP synthase subunit delta, mitochondrial OS=Schizosaccharomyces pombe GN=atp16 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.252e-13 Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 235 KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTK-KYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLXKAEAQIGVDVHSALNSAL 624 KL ++ LPY + V V +PA G+MG+L HVP I LKPGV+SV D + K KYF+S GFA ++ I EA ++ S+ + L + +++S+ + AEA + V V +L AL Sbjct: 30 KLVLSMALPYQTIYEKVPVTQVDIPAEDGEMGILKDHVPMIQCLKPGVISVTDESSNKSKYFISGGFAVQQPSNELSITVPEAYKLEDFSSSVANQLLEKHKAEMNSSDEGV-AAEAAVRVSVLESLVRAL 159
BLAST of EY665070 vs. ExPASy Swiss-Prot
Match: ATPE_MAGSA (ATP synthase epsilon chain OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=atpC PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.430e-11 Identity = 38/117 (32.48%), Postives = 62/117 (52.99%), Query Frame = 1 Query: 235 KLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGND-TKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLXKAEA 582 K+ V P A L + +VDMV+VP + G G L H P I ++PGV+ +HDG + FV+ GFA ++ + ++A EA+P+ ++ + + + L A +D KA A Sbjct: 4 KIQFELVSP-AKLLVSSKVDMVVVPGAEGDFGALALHAPMITTVRPGVIDIHDGGKVSSSVFVAGGFAEVNEERIT-VLAEEAIPVGELTAEMAEARKKAAKEALDDAKSDRDKAHA 118
BLAST of EY665070 vs. ExPASy Swiss-Prot
Match: ATPE_OLTVI (ATP synthase epsilon chain, chloroplastic OS=Oltmannsiellopsis viridis GN=atpE PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.851e-11 Identity = 39/100 (39.00%), Postives = 51/100 (51.00%), Query Frame = 1 Query: 283 KEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLXKAEA 582 KEVD +I+P +TGQMGVL H P I L GV+ V D + V GFA + N + ++ EA + IDP ++ A Q L AT K EA Sbjct: 17 KEVDEIILPTNTGQMGVLSNHAPLITALDIGVMLVRTQKDWESVAVMGGFALVKQNQIT-VLVNEAESKETIDPQEAEEAFATAKQTLEQATGQKEKVEA 115 The following BLAST results are available for this feature:
BLAST of EY665070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665070 ID=EY665070; Name=EY665070; organism=Citrus sinensis; type=EST; length=774bpback to top |