EY665069

Overview
NameEY665069
Unique NameEY665069
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665069 vs. ExPASy Swiss-Prot
Match: ACOD_HUMAN (Acyl-CoA desaturase OS=Homo sapiens GN=SCD PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.419e-11
Identity = 37/106 (34.91%), Postives = 51/106 (48.11%), Query Frame = 1 
Query:  382 MHLLALFA----PFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFXHMXWL 687
            +HL AL+     P C  ++ L   F  Y     LGIT   HR  SHRS+K    L          + Q +  +W   HR HH+F ++  DPH+   GF+F H+ WL
Sbjct:   82 LHLGALYGITLIPTCKFYTWLWGVF--YYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWL 185
The following BLAST results are available for this feature:
BLAST of EY665069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
ACOD_HUMAN9.419e-1134.91Acyl-CoA desaturase OS=Homo sapiens GN=SCD PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-F07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665069 ID=EY665069; Name=EY665069; organism=Citrus sinensis; type=EST; length=880bp
AAGCCTTTCTCCATGGCTTTCATCACAACATCACCAACCAAACCAAAATC
TTTCACTTTTTCACCTCTGTGTCAAGCAAGAAAAACTCAAACCGATAAAG
TTCTGGCCTTCGGCAATTCTAACTTACAACACAAGCTAATAAAAACGAGC
TTTGTGTATCATGTTTATAAATATAACAAAAGAGAGTCACTAGCAATTGT
TAATGCAGCATCAATTGAATCGACAGAACCAAAGCCAGAGCCAGAGCCAG
AGCAAATTCCCGAGGTGGAAACTTATGGGAGAATTTTGTTATCTGATGTG
TTGGTGAAGAGGAGAAGAAGTTTATTTTCTGGGAGGAATTGGAACTCATT
GGATATAAGCACAGCTGGTGTTGTTTTGGCAATGCATTTGCTTGCTCTCT
TTGCGCCATTTTGTTTCACGTGGAGTTCTCTTAGGGTTGCTTTTGGACTT
TATGTTGTGACTGGACTTCTGGGTATCACTCTTTCTTTTCACAGAAACCT
TTCTCATAGGAGTTTTAAATTACCCAAATGGCTTGAGTACTTGTTTGCTT
ATTGCGGAGTTCAGTCTCTTCAGGGGAATCCAATTGATTGGGTAAGCACA
CATAGGTATCATCACCAGTTTTGTGATTCCGAAAGGGATCCGCATAGTCC
CATTGAAGGGTTTTGGTTTANTCACATGAGNTGGCTGTTTGATAAAGGAT
TCTGTCTCGAAAGGTGTGGGAGGGCCAAACATGTGGGAGATTTANAGAAA
CAGCCTTTCTATAGATNCTTAAGAGCACTTACATTCTCCATNCAATTGCA
CTGGNAGGCTTGCTATATGCACTGGGAGGCTTTTCTTTCATTGTGTGGGG
AATGGGTGTAAAGATTGTNGGGGTATATAA
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