CV718954
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV718954 vs. ExPASy Swiss-Prot
Match: RS7_HALMO (30S ribosomal protein S7P OS=Halococcus morrhuae GN=rps7p PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.109e-34 Identity = 81/206 (39.32%), Postives = 122/206 (59.22%), Query Frame = 3 Query: 186 TQSQDPSQPQ-----YDVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 788 +++ +P QP KLF RW ++ +D S YI V T V HT GR++ K+F+K++ IVERL N LM N GKK A RIV++A ++I T+++P+QV+V AV N+ PRE+ R+ G+ QAVD++P RRV+QA+ + G ++F++ E LA++L AA +YA+ +K+E ERVA A R Sbjct: 4 SEAPEPDQPAGAEEATGAKLFERWDVTGIEYDDPSTERYITV------TPVEHTMGRHAGKQFQKSEISIVERLINRLMQTDENTGKKQQATRIVRNAFDLIAERTEESPVQVLVSAVENAAPREETVRLKYGGISVPQAVDVAPQRRVDQALKFIAEGTHSASFKSPTDAHEALAEQLTGAANYDVQTYAVNQKEEKERVAAAAR 203
BLAST of CV718954 vs. ExPASy Swiss-Prot
Match: RS7_PYRAB (30S ribosomal protein S7P OS=Pyrococcus abyssi GN=rps7p PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.366e-34 Identity = 84/207 (40.58%), Postives = 119/207 (57.49%), Query Frame = 3 Query: 216 YDVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRN----------------NGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 788 +++K+ RW+ EDV+V D SL YI ++ +PHT GR++ K F KA IVERL N +M G + N KK+ A +VK A +II T +NPIQV+V A+ N+ PRED T + G+ AVDISP+RR++ A+ + GA +R + AE LA+E+I AA SYA KK EIER+A+++R Sbjct: 13 HEIKVMGRWSTEDVEVRDPSLKPYINLEPR----LLPHTHGRHAKKHFGKANVHIVERLINKIMRSGGSHYKVAGHFMRREHRSLNSKKVKAYEVVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPMRRLDVALRNIALGASAKCYRTKMSFAEALAEEIILAANKDPKSYAYSKKLEIERIAESSR 215
BLAST of CV718954 vs. ExPASy Swiss-Prot
Match: RS7_PICTO (30S ribosomal protein S7P OS=Picrophilus torridus GN=rps7p PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.154e-34 Identity = 75/190 (39.47%), Postives = 117/190 (61.58%), Query Frame = 3 Query: 219 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 788 D + ++ +Q++D+ L+ YI + N+ + HT GRYS K +ERL N LM + GKK A R++K A EI+ T QNP+QV+++A+ NS PRE+ TR+ G+ ++VD+SP RR+++A+ + GA +F++ I ECLA+E+I A++ NSYA+ KK+EIERVA + R Sbjct: 2 DRLIMGKYDVSGIQIHDMGLAKYINL----NSYFNLHTGGRYSNYSAGKRNVNTIERLLNKLMRTEKWTGKKYSAYRVLKEAFEIVEQKTKQNPVQVLINAIENSAPREEVTRLKYGGIAVPKSVDVSPSRRLDEALRNICIGATSKSFKSKVPIEECLANEIILASRNDGNSYAVSKKEEIERVAASAR 187
BLAST of CV718954 vs. ExPASy Swiss-Prot
Match: RS7_NATPD (30S ribosomal protein S7P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps7p PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.039e-33 Identity = 78/207 (37.68%), Postives = 119/207 (57.49%), Query Frame = 3 Query: 186 TQSQDPSQP------QYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 788 +++ +P P + +LF W +++ +D S YI V T + HT GR+S K+F+K++ IVERL N LM N GKK A +IV+ A +I+ TD+NP+QV+V AV N+GPRE+ R+ G+ +AVD++P RRV+ A+ + G +F+ + E LA +LI AA +Y + +K+E ERVA A R Sbjct: 3 SEAPEPDAPASTDDERVSAQLFGEWEIGEIEYDDPSTRRYITV------TPIAHTMGRHSEKQFKKSEISIVERLINRLMQTDENTGKKQQATKIVREAFDIVAERTDENPVQVLVTAVENAGPREETVRLKYGGISVPKAVDVAPQRRVDLALKFIAEGTYNDSFKTTTPVEEALAHQLIGAANYDLQAYPVSQKEEQERVAAAAR 203
BLAST of CV718954 vs. ExPASy Swiss-Prot
Match: RS7_HALWD (30S ribosomal protein S7P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps7p PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.726e-32 Identity = 74/197 (37.56%), Postives = 114/197 (57.87%), Query Frame = 3 Query: 198 DPSQPQYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 788 D + KLF W +++ D S YI V T + HT GR++ K+F K++ +VERL N LM N G K + IV+ A + IH T++NP+QV+V V N+ PRE+ R+ G+ QAVD++P RRV+QA+ + G + ++++ ++ A+ LA +I AA SYA+ +K+E ERVA+A R Sbjct: 37 DTDTASANAKLFGEWDVSEIEYEDPSTQRYITV------TPIAHTMGRHAAKQFEKSKISVVERLINRLMQTEDNTGHKQKTMNIVEDAFDTIHNRTEENPVQVLVRGVENAAPREETVRLKYGGISVPQAVDVAPQRRVDQALKFIADGTQRGSYKSAQSAADSLAQVIIGAANYDVQSYAVGQKEESERVAEAAR 227
BLAST of CV718954 vs. ExPASy Swiss-Prot
Match: RS7_NANEQ (30S ribosomal protein S7P OS=Nanoarchaeum equitans GN=rps7p PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.560e-32 Identity = 83/200 (41.50%), Postives = 112/200 (56.00%), Query Frame = 3 Query: 222 VKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGR-----------NNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 788 +KLF RW +EDV V D L DYI ++ +P++ GR+ RF KA+ PI+ERL LM G GKK A +I+ EII T QNP++V V A+ N+ PRE+ T I G +AVD SP RRV+ AI + GA + + +I E LA+E+INA S SYAIK+K EIE+ A++ R Sbjct: 3 MKLFGRWDYEDVTVEDPGLRDYINLKPM----LIPYSGGRHQKHRFGKAKIPIIERLAGRLMTSGHLGKKHKWTSEHQTGKKYNAYKIIIRTFEIIEKRTKQNPLKVFVKAIENAAPREETTTIEYGGARYPKAVDCSPQRRVDLAIRHMVWGAFHGSRKKPISIEEALAEEIINAYNNSLKSYAIKRKLEIEKTAESAR 198
BLAST of CV718954 vs. ExPASy Swiss-Prot
Match: RS7_RHOPB (30S ribosomal protein S7 OS=Rhodopseudomonas palustris (strain BisB18) GN=rpsG PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.888e-11 Identity = 52/154 (33.77%), Postives = 80/154 (51.95%), Query Frame = 3 Query: 327 HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 788 H+A + V K I+ + NS+M G KK +A IV A+EII T Q P+ V A+ N P + G + V++ +RR I L + AR+ RN KT+ E L+ EL++A+ G N A+KK++++ R+A+ANR Sbjct: 5 HSAEKREVNPDPKFGNVILTKFMNSVMYAG----KKSVAEGIVYGALEIIEAKTKQGPLPVFEQALENVMPTIEVRSRRVGGATYQVPVEVRSVRRQALGIRWLISAARD---RNEKTMTERLSAELLDASNGRGN--AVKKREDVHRMAEANR 149
BLAST of CV718954 vs. ExPASy Swiss-Prot
Match: RS7_AZOC5 (30S ribosomal protein S7 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rpsG PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.888e-11 Identity = 52/154 (33.77%), Postives = 76/154 (49.35%), Query Frame = 3 Query: 327 HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 788 H A R V K IV R NS+M +GKK +A IV A++++ NP+ + V A+ N P + G + V++ RR AI L AR RN KT+ E L+ EL++AA N A+KK+++ R+A+ANR Sbjct: 5 HKAERREVIPDAKFGNIIVSRFMNSIM----RDGKKSVAESIVYGALDVVEAKAKSNPLDLFVTALENVAPAVEVRSRRVGGATYQVPVEVRTERRQTLAIRWLIASARA---RNEKTMVERLSAELLDAANNRGN--AVKKREDTHRMAEANR 149 The following BLAST results are available for this feature:
BLAST of CV718954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >CV718954 ID=CV718954; Name=CV718954; organism=Citrus sinensis; type=EST; length=816bpback to top |