EY665058

Overview
NameEY665058
Unique NameEY665058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7629 contig Csv1_Contig7629:227..1109. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY665058 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.000e-52
Identity = 107/255 (41.96%), Postives = 152/255 (59.61%), Query Frame = 2 
Query:   11 GVNLVIGAVLNHESLVKAIKQ--VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYVASNFFAAYFLPNLSQPGATAPPRDKVVILGDGNPKAVYNKEDDIGTYTIKAVDDPRTLNKILYIKPPGNIYSFNDLVSLWERKIGKTLQRVYVPEEQVLKNIQEAAPPVNVILSIQHSAFVKGDQTNFQIEPSFGVEASQLYPDVKYTTVDEYLSQFV 769
            G  ++ G + + E + K +K+  +DVVIS VG   L DQ+ ++ AIK    IKRF PSEFG+DVDR   VEP  + +  K  +RRAVE  GIP+T +  N  A++   +   P    PP D+  I GDGN KA +   +DIG +T+K +DD RTLNK ++ +P  N YS N+L SLWE+KIG+TL R  V  +++L +  E   P +++ S  H  F+ G Q NF I+    VE   LYPD K+ ++D+    FV
Sbjct:   63 GAKVIYGVINDKECMEKILKEYEIDVVISLVGGARLLDQLTLLEAIKSVKTIKRFLPSEFGHDVDRTDPVEPGLTMYKEKRLVRRAVEEYGIPFTNICCNSIASWPYYDNCHPSQVPPPMDQFQIYGDGNTKAYFIDGNDIGKFTMKTIDDIRTLNKNVHFRPSSNCYSINELASLWEKKIGRTLPRFTVTADKLLAHAAENIIPESIVSSFTHDIFINGCQVNFSIDEHSDVEIDTLYPDEKFRSLDDCYEDFV 317
The following BLAST results are available for this feature:
BLAST of EY665058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LAR_DESUN1.000e-5241.96Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-E08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665058 ID=EY665058; Name=EY665058; organism=Citrus sinensis; type=EST; length=883bp
CAAAAAACTCGGCGTCAATCTCGTCATCGGAGCTGTGTTGAATCACGAGA
GCTTGGTGAAGGCGATAAAACAAGTGGACGTGGTGATATCAACGGTCGGT
CACACTTTATTAGGTGATCAGGTCAAGATTATTGCGGCCATTAAAGAAGC
TGGTAACATTAAGAGATTCTTCCCTTCAGAATTTGGGAATGATGTTGATC
GAGTCCATGCCGTTGAGCCAGCAAAATCAGCATTTGCCACAAAGGCAAAA
ATCCGCCGAGCCGTTGAGGCTGAAGGGATTCCGTATACTTATGTAGCGTC
GAATTTCTTTGCTGCTTACTTCCTTCCCAATTTGTCGCAGCCCGGGGCCA
CTGCCCCACCTAGGGATAAAGTTGTCATCTTAGGCGATGGAAATCCAAAA
GCTGTTTATAACAAGGAAGATGATATTGGAACCTATACTATCAAAGCGGT
TGATGATCCCAGAACCTTGAACAAAATCCTTTACATTAAACCCCCTGGTA
ATATTTACTCATTCAATGATCTTGTGTCCTTGTGGGAGAGAAAGATTGGC
AAAACCCTCCAAAGGGTGTACGTTCCGGAGGAGCAAGTCCTAAAGAATAT
TCAAGAAGCTGCACCTCCAGTCAATGTGATATTATCAATTCAGCACTCTG
CTTTCGTGAAGGGAGATCAAACCAACTTCCAGATTGAACCATCGTTTGGA
GTTGAAGCCTCGCAGCTCTATCCTGATGTCAAGTACACTACAGTTGATGA
GTATCTCAGTCAGTTTGTGTAAACCCTTCTCTGTTGAGCTGCAGCTTGCA
GGATCTTGNNGAATAATAAATAATTGGCTTTTGCCATCTTTGGGTTCTTA
TGTAAGCATTATGGNTGNTGGCCTTACTTTCGT
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